Gene: COL.COLO4_29921

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_29921
  • Transcript Identifier COL.rna28638
  • Gene Type Coding gene
  • Location AWUE01020452.1 : 72677-79333 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28638
  • GenBank OMO68069.1
  • id gene29893
  • gene_name COLO4_29921
  • uniprot A0A1R3HCJ8

Descriptions

  • Description Ribonuclease T2-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT2G39780
GO:0016075
ISO
PLAZA Integrative OrthologyrRNA catabolic process AT2G39780
GO:0010507
ISO
PLAZA Integrative Orthologynegative regulation of autophagy AT2G39780
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G39780
GO:0033897
IEA
GOA Databaseribonuclease T2 activity
GO:0033897
IEA
InterProribonuclease T2 activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010168
ISO
PLAZA Integrative OrthologyER body AT2G39780
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT2G39780
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G39780
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G39780
GO:0005634
IEA
GOA Databasenucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001568 Ribonuclease T2-like
IPR001005 SANT/Myb domain
IPR036430 Ribonuclease T2-like superfamily
Mapman id Description
35.1 not assigned.annotated