Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1868 Erigeron canadensis HOM05D005984 ORTHO05D007754 2.2e-206 722.2 419 100.0
Lsat_1_v5_gn_3_35480 Lactuca sativa HOM05D005984 ORTHO05D007754 7.7e-183 644.0 364 93.4
TAR629G1998 Trochodendron aralioides HOM05D005984 ORTHO05D007754 3.0e-171 605.5 364 82.1
DCAR_002576 Daucus carota HOM05D005984 ORTHO05D007754 2.0e-170 602.8 365 84.1
CsaV3_7G030600 Cucumis sativus L. HOM05D005984 ORTHO05D007754 9.8e-170 600.5 361 80.9
ClCG09G004540 Citrullus lanatus HOM05D005984 ORTHO05D007754 1.7e-169 599.7 361 80.6
HanXRQChr17g0544921 Helianthus annuus HOM05D005984 ORTHO05D007754 1.7e-169 599.7 341 93.0
Cpa.g.sc44.38 Carica papaya HOM05D005984 ORTHO05D007754 2.9e-169 599.0 359 81.9
Sabra07G0060100 Salix brachista HOM05D005984 ORTHO05D007754 6.4e-169 597.8 359 81.1
GSVIVG01012045001 Vitis vinifera HOM05D005984 ORTHO05D007754 1.8e-168 596.3 366 79.8
Potri.007G071300 Populus trichocarpa HOM05D005984 ORTHO05D007754 9.2e-168 594.0 357 81.0
Sed0006813 Sechium edule HOM05D005984 ORTHO05D007754 9.2e-168 594.0 366 79.2
Lj3A850G95 Lonicera japonica HOM05D005984 ORTHO05D007754 1.2e-167 593.6 385 78.4
Aqoxy3G04258 Aquilegia oxysepala HOM05D005984 ORTHO05D007754 2.0e-167 592.8 364 81.0
Glyma.11G100800 Glycine max HOM05D005984 ORTHO05D007754 2.0e-167 592.8 358 81.6
Manes.04G064200 Manihot esculenta HOM05D005984 ORTHO05D007754 3.5e-167 592.0 358 86.0
PGR044G2022 Punica granatum HOM05D005984 ORTHO05D007754 4.6e-167 591.7 361 79.5
CANSAT56G2432 Cannabis sativa HOM05D005984 ORTHO05D007754 5.9e-167 591.3 363 85.4
Actinidia38413 Actinidia chinensis HOM05D005984 ORTHO05D007754 7.8e-167 590.9 355 81.7
CAN.G157.24 Capsicum annuum HOM05D005984 ORTHO05D007754 1.0e-166 590.5 365 80.0
Dinv11718 Davidia involucrata HOM05D005984 ORTHO05D007754 1.0e-166 590.5 359 86.9
Actinidia13710 Actinidia chinensis HOM05D005984 ORTHO05D007754 1.3e-166 590.1 359 80.8
Cc11_g02280 Coffea canephora HOM05D005984 ORTHO05D007754 1.3e-166 590.1 367 78.7
Sed0023953 Sechium edule HOM05D005984 ORTHO05D007754 1.7e-166 589.7 364 83.8
VMungo0647G2306 Vigna mungo HOM05D005984 ORTHO05D007754 1.7e-166 589.7 358 80.4
CiPaw.06G060100 Carya illinoinensis HOM05D005984 ORTHO05D007754 2.3e-166 589.3 359 80.8
Gohir.D02G187800 Gossypium hirsutum HOM05D005984 ORTHO05D007754 2.3e-166 589.3 367 79.8
Gorai.005G210500 Gossypium raimondii HOM05D005984 ORTHO05D007754 2.3e-166 589.3 367 79.8
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 2.3e-166 589.3 361 80.9
VMungo1127G1047 Vigna mungo HOM05D005984 ORTHO05D007754 2.3e-166 589.3 358 81.0
Phvul.011G029800 Phaseolus vulgaris HOM05D005984 ORTHO05D007754 3.0e-166 589.0 358 81.0
Prupe.1G347100 Prunus persica HOM05D005984 ORTHO05D007754 3.0e-166 589.0 367 83.7
ATR0618G114 Amborella trichopoda HOM05D005984 ORTHO05D007754 5.0e-166 588.2 362 80.9
FvH4_4g36890 Fragaria vesca HOM05D005984 ORTHO05D007754 5.0e-166 588.2 364 85.4
CSS0012805 Camellia sinensis var. sinensis HOM05D005984 ORTHO05D007754 6.6e-166 587.8 357 79.6
Glyma.12G026900 Glycine max HOM05D005984 ORTHO05D007754 6.6e-166 587.8 358 80.7
HanXRQChr06g0171511 Helianthus annuus HOM05D005984 ORTHO05D007754 6.6e-166 587.8 341 92.1
Thecc.02G160200 Theobroma cacao HOM05D005984 ORTHO05D007754 8.6e-166 587.4 367 79.6
CDE07G0658 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 1.1e-165 587.0 367 82.3
MD13G1005900 Malus domestica HOM05D005984 ORTHO05D007754 1.1e-165 587.0 368 79.1
Sopen02g003530 Solanum pennellii HOM05D005984 ORTHO05D007754 1.1e-165 587.0 368 79.1
FAN12G1392 Fragaria x ananassa HOM05D005984 ORTHO05D007754 1.5e-165 586.6 364 85.7
vmacro08597 Vaccinium macrocarpon HOM05D005984 ORTHO05D007754 2.5e-165 585.9 362 85.1
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea HOM05D005984 ORTHO05D007754 3.3e-165 585.5 381 76.9
PGSC0003DMG400002324 Solanum tuberosum HOM05D005984 ORTHO05D007754 3.3e-165 585.5 366 79.0
TWI53G1952 Tripterygium wilfordii HOM05D005984 ORTHO05D007754 3.3e-165 585.5 359 79.7
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea HOM05D005984 ORTHO05D007754 4.3e-165 585.1 381 76.9
MD16G1002000 Malus domestica HOM05D005984 ORTHO05D007754 5.6e-165 584.7 365 83.8
MSTRG.431 Avicennia marina HOM05D005984 ORTHO05D007754 9.5e-165 583.9 359 80.8
Gohir.A03G164600 Gossypium hirsutum HOM05D005984 ORTHO05D007754 9.5e-165 583.9 359 79.7
RcHm_v2.0_Chr4g0446671 Rosa chinensis HOM05D005984 ORTHO05D007754 1.2e-164 583.6 363 85.4
Ciclev10031672m.g Citrus clementina HOM05D005984 ORTHO05D007754 4.7e-164 581.6 358 83.2
Os06g0729650 Oryza sativa ssp. japonica HOM05D005984 ORTHO05D007754 6.2e-164 581.3 358 80.2
PSO063G6567 Papaver somniferum HOM05D005984 ORTHO05D007754 6.2e-164 581.3 359 79.7
Lalb_Chr03g0024761 Lupinus albus HOM05D005984 ORTHO05D007754 8.0e-164 580.9 361 85.0
TPR.G32343 Trifolium pratense HOM05D005984 ORTHO05D007754 8.0e-164 580.9 370 78.9
Cfa008738 Carpinus fangiana HOM05D005984 ORTHO05D007754 1.0e-163 580.5 362 78.2
Manes.11G108100 Manihot esculenta HOM05D005984 ORTHO05D007754 1.0e-163 580.5 358 84.9
THA.LOC104800911 Tarenaya hassleriana HOM05D005984 ORTHO05D007754 1.0e-163 580.5 348 80.7
PSO782G0234 Papaver somniferum HOM05D005984 ORTHO05D007754 1.4e-163 580.1 359 79.4
Psat7g177360 Pisum sativum HOM05D005984 ORTHO05D007754 1.4e-163 580.1 357 80.7
Lj3g0024041 Lotus japonicus HOM05D005984 ORTHO05D007754 2.3e-163 579.3 370 83.5
SGA_v2.0_scaffold88G27230 Striga asiatica HOM05D005984 ORTHO05D007754 3.1e-163 578.9 378 82.0
Zm00001eb271820 Zea mays HOM05D005984 ORTHO05D007754 3.1e-163 578.9 364 79.1
Duzib052G0297 Durio zibethinus HOM05D005984 ORTHO05D007754 4.4e-162 575.1 359 78.0
Medtr4g075040 Medicago truncatula HOM05D005984 ORTHO05D007754 5.8e-162 574.7 370 78.1
Thhalv10004338m.g Eutrema salsugineum HOM05D005984 ORTHO05D007754 1.3e-161 573.5 358 77.7
FAN07G1379 Fragaria x ananassa HOM05D005984 ORTHO05D007754 2.2e-161 572.8 390 80.0
Eucgr.J00865 Eucalyptus grandis HOM05D005984 ORTHO05D007754 2.9e-161 572.4 359 83.0
BolC7t44963H Brassica oleracea HOM05D005984 ORTHO05D007754 4.9e-161 571.6 359 77.4
Atru.chr11.1117 Acer truncatum HOM05D005984 ORTHO05D007754 8.3e-161 570.9 363 81.5
Carub.0006s2091 Capsella rubella HOM05D005984 ORTHO05D007754 8.3e-161 570.9 358 77.7
Ca_19021_v3 Cicer arietinum L. HOM05D005984 ORTHO05D007754 1.1e-160 570.5 392 74.7
unitig_8.g2892 Utricularia gibba HOM05D005984 ORTHO05D007754 1.1e-160 570.5 358 78.5
A03p46390 Brassica napus HOM05D005984 ORTHO05D007754 1.4e-160 570.1 359 77.2
C07p44410 Brassica napus HOM05D005984 ORTHO05D007754 1.4e-160 570.1 359 77.2
BraA03t13765Z Brassica rapa HOM05D005984 ORTHO05D007754 1.4e-160 570.1 359 77.2
AT5G23120 Arabidopsis thaliana HOM05D005984 ORTHO05D007754 1.9e-160 569.7 358 77.9
COL.COLO4_19602 Corchorus olitorius HOM05D005984 ORTHO05D007754 2.4e-160 569.3 400 72.5
AL6G34310 Arabidopsis lyrata HOM05D005984 ORTHO05D007754 3.2e-160 568.9 367 81.2
Oeu026903.3 Olea europaea HOM05D005984 ORTHO05D007754 3.2e-160 568.9 405 77.3
AUR62017696 Chenopodium quinoa HOM05D005984 ORTHO05D007754 4.1e-160 568.5 357 81.8
Sp2g24000 Schrenkiella parvula HOM05D005984 ORTHO05D007754 1.6e-159 566.6 359 81.9
Nn3g18651 Nelumbo nucifera HOM05D005984 ORTHO05D007754 1.0e-158 563.9 340 81.5
HPP92_012878 Vanilla planifolia HOM05D005984 ORTHO05D007754 1.0e-158 563.9 358 77.7
MELO3C023596.2 Cucumis melo HOM05D005984 ORTHO05D007754 2.3e-158 562.8 342 80.1
CARHR190410 Cardamine hirsuta HOM05D005984 ORTHO05D007754 3.0e-158 562.4 359 81.9
Aa31LG11G2610 Aethionema arabicum HOM05D005984 ORTHO05D007754 8.6e-158 560.8 359 81.1
Haze_11755 Corylus avellana HOM05D005984 ORTHO05D007754 1.5e-157 560.1 369 75.6
EL10Ac9g22946 Beta vulgaris HOM05D005984 ORTHO05D007754 2.5e-157 559.3 375 74.4
AUR62015232 Chenopodium quinoa HOM05D005984 ORTHO05D007754 2.1e-156 556.2 325 86.8
AUR62015234 Chenopodium quinoa HOM05D005984 ORTHO05D007754 2.1e-156 556.2 325 86.8
Rhsim04G0167300 Rhododendron simsii HOM05D005984 ORTHO05D007754 2.3e-155 552.7 361 77.0
QL03p045967 Quercus lobata HOM05D005984 ORTHO05D007754 6.8e-155 551.2 459 63.0
Migut.E00699 Erythranthe guttata HOM05D005984 ORTHO05D007754 5.8e-154 548.1 359 76.9
Hund08579 Selenicereus undatus HOM05D005984 ORTHO05D007754 5.8e-154 548.1 366 73.5
SalBow2G1456 Salvia bowleyana HOM05D005984 ORTHO05D007754 3.7e-153 545.4 450 68.4
Solyc02g014150.4 Solanum lycopersicum HOM05D005984 ORTHO05D007754 2.4e-152 542.7 345 77.7
Sc10g0006780 Simmondsia chinensis HOM05D005984 ORTHO05D007754 6.2e-148 528.1 336 78.0
Nitab4.5_0000133g0050 Nicotiana tabacum HOM05D005984 ORTHO05D007754 2.3e-147 526.2 512 60.2
SMO347G0352 Selaginella moellendorffii HOM05D005984 ORTHO05D007754 6.8e-147 524.6 357 71.4
Pp3c15_7930 Physcomitrium patens HOM05D005984 ORTHO05D007754 1.3e-145 520.4 350 79.4
Ah.01g001560 Amaranthus hybridus HOM05D005984 ORTHO05D007754 1.6e-143 513.5 365 70.7
Pp3c9_10350 Physcomitrium patens HOM05D005984 ORTHO05D007754 3.5e-143 512.3 360 77.2
Nitab4.5_0006277g0020 Nicotiana tabacum HOM05D005984 ORTHO05D007754 1.1e-141 507.3 544 55.9
CDE04G0799 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 3.6e-140 502.3 367 75.2
Mapoly0020s0149 Marchantia polymorpha HOM05D005984 ORTHO05D007754 1.2e-138 497.3 368 67.1
Peaxi162Scf00363g00317 Petunia axillaris HOM05D005984 ORTHO05D007754 1.5e-133 480.3 488 58.4
CBR_g11122 Chara braunii HOM05D005984 ORTHO05D007754 5.6e-117 425.2 336 68.2
FAN17G0887 Fragaria x ananassa HOM05D005984 ORTHO05D007754 2.8e-116 422.9 390 64.1
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis HOM05D005984 ORTHO05D007754 2.0e-114 416.8 338 67.8
Dinv01185 Davidia involucrata HOM05D005984 ORTHO05D007754 2.4e-107 393.3 203 91.6
MCO05G498 Micromonas commoda HOM05D005984 ORTHO05D007754 1.2e-106 391.0 355 59.7
Cre06.g273700 Chlamydomonas reinhardtii HOM05D005984 ORTHO05D007754 3.2e-104 382.9 365 60.0
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 2.2e-100 370.2 209 85.6
PRCOL_00000217 Prasinoderma coloniale HOM05D005984 ORTHO05D007754 1.8e-78 297.4 292 57.5
MD15G1106700 Malus domestica HOM05D005984 ORTHO05D007754 3.5e-58 229.9 114 93.9
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 4.3e-56 223.0 353 41.6
C09p07860 Brassica napus HOM05D005984 ORTHO05D007754 2.5e-48 197.2 181 59.7
SEGI_34707 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 1.9e-43 181.0 122 72.1
MD00G1043400 Malus domestica HOM05D005984 ORTHO05D007754 1.5e-40 171.4 111 73.9
BcaB04g19886 Brassica carinata HOM05D005984 ORTHO05D007754 5.2e-38 162.9 211 46.9
HanXRQChr10g0318441 Helianthus annuus HOM05D005984 ORTHO05D007754 9.5e-32 142.1 69 92.8
AUR62024854 Chenopodium quinoa HOM05D005984 ORTHO05D007754 4.9e-28 129.8 75 85.3
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 1.4e-27 128.3 105 63.8
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 6.0e-26 122.9 83 71.1
SEGI_27749 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 6.4e-20 102.8 53 84.9
C09p07870 Brassica napus HOM05D005984 ORTHO05D042888 7.8e-18 95.9 103 51.5
MBI03_g15323_MAGBIO Magnolia biondii HOM05D002934 ORTHO05D003937 5.6e-16 89.7 43 93.0
Zm00001eb227280 Zea mays HOM05D005984 ORTHO05D007754 9.9e-13 79.0 62 66.1
BolC9t53702H Brassica oleracea HOM05D005984 ORTHO05D042888 5.4e-11 73.2 63 61.9
Glyma.01G000174 Glycine max HOM05D036214 ORTHO05D007754 9.3e-11 72.4 43 79.1
Glyma.06G237300 Glycine max HOM05D005984 ORTHO05D007754 1.6e-10 71.6 70 58.6
Pp3c24_8290 Physcomitrium patens HOM05D013586 ORTHO05D011470 1.0e-09 68.9 38 76.3
SGA_v2.0_scaffold57G20111 Striga asiatica HOM05D005984 ORTHO05D402503 1.1e-08 65.5 39 79.5


User provided reference genes

Program Settings