Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.1e-164 583.2 290 100.0
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 1.7e-144 516.2 287 88.5
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 5.4e-143 511.1 287 87.5
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 2.1e-134 482.6 293 82.6
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.5e-132 476.5 292 80.8
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.6e-129 465.7 293 79.9
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 3.4e-129 465.3 290 79.3
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 1.4e-127 459.9 292 79.1
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 3.5e-126 455.3 289 77.5
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.0e-126 454.5 294 77.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 3.0e-125 452.2 292 77.7
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.9e-125 451.8 287 78.7
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 5.1e-125 451.4 284 79.2
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 2.5e-124 449.1 292 77.1
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 3.3e-124 448.7 290 78.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 4.3e-124 448.4 292 77.1
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 6.2e-123 444.5 310 73.9
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 5.8e-121 438.0 300 74.7
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 1.7e-120 436.4 271 80.4
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.9e-120 435.6 273 79.1
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 1.1e-119 433.7 293 76.5
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 2.4e-119 432.6 301 75.1
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 7.1e-119 431.0 300 74.7
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 6.0e-118 427.9 300 73.0
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 7.9e-118 427.6 312 71.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.0e-117 427.2 288 75.7
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 3.9e-117 425.2 302 74.2
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 8.7e-117 424.1 299 73.6
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.1e-116 423.7 299 72.9
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 2.5e-116 422.5 300 72.7
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 3.3e-116 422.2 297 73.7
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 4.3e-116 421.8 299 72.2
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 4.3e-116 421.8 299 72.6
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 5.6e-116 421.4 277 76.5
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 9.6e-116 420.6 302 72.5
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 1.3e-115 420.2 233 89.7
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.1e-115 419.5 302 71.2
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 2.8e-115 419.1 304 71.7
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 6.2e-115 417.9 293 74.7
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 6.2e-115 417.9 299 71.2
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 8.1e-115 417.5 304 71.4
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.4e-114 416.8 303 71.6
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 1.4e-114 416.8 303 71.6
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 1.4e-114 416.8 301 70.1
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 2.4e-114 416.0 304 71.1
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 9.0e-114 414.1 299 70.9
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 1.5e-113 413.3 303 71.3
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.5e-113 413.3 301 69.8
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 2.6e-113 412.5 301 69.1
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 2.6e-113 412.5 300 70.0
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 3.4e-113 412.1 300 70.3
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 4.5e-113 411.8 303 71.0
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 5.8e-113 411.4 303 71.3
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 1.0e-112 410.6 305 69.5
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 1.0e-112 410.6 303 70.6
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.0e-112 410.6 300 70.7
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.2e-112 409.5 301 71.4
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 2.9e-112 409.1 302 70.5
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 2.9e-112 409.1 305 69.8
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 2.9e-112 409.1 301 70.1
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 3.8e-112 408.7 307 68.7
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 5.5e-111 404.8 304 69.1
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 3.0e-109 399.1 298 69.1
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.7e-109 397.9 317 67.2
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 2.5e-108 396.0 276 73.2
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.5e-108 396.0 317 66.9
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.3e-108 395.2 295 68.1
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 9.6e-108 394.0 299 67.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 1.3e-107 393.7 298 67.8
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 1.3e-107 393.7 295 68.1
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 1.6e-107 393.3 296 68.2
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.4e-106 390.2 295 68.1
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 3.1e-106 389.0 335 63.3
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.1e-106 389.0 266 74.8
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 5.3e-106 388.3 312 66.3
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 6.9e-106 387.9 299 68.6
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 2.0e-105 386.3 296 67.9
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 2.0e-105 386.3 294 66.7
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 2.6e-105 386.0 296 67.9
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.0e-104 384.0 299 67.9
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 1.2e-102 377.1 276 67.4
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 1.2e-102 377.1 303 64.4
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 2.7e-102 375.9 258 74.4
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 7.9e-102 374.4 289 63.3
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 1.5e-97 360.1 299 64.5
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.7e-96 356.7 236 77.5
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 2.1e-94 349.7 296 59.5
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 3.3e-92 342.4 247 70.4
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 4.4e-92 342.0 243 71.6
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.3e-91 340.5 250 69.6
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 8.2e-91 337.8 293 62.1
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 1.4e-90 337.0 252 69.4
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 8.5e-88 327.8 206 77.7
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 2.0e-84 316.6 304 53.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 7.4e-84 314.7 204 77.5
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 9.7e-84 314.3 326 56.1
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 7.0e-82 308.1 298 51.3
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.7e-80 303.5 230 70.4
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 3.8e-80 302.4 207 75.8
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 6.5e-80 301.6 238 66.4
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 4.1e-74 282.3 217 67.7
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 3.5e-73 279.3 250 60.8
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 5.9e-73 278.5 222 65.8
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.3e-72 277.3 212 68.9
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 6.5e-72 275.0 149 85.2
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 4.4e-68 262.3 252 57.9
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.2e-67 260.0 228 63.2
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.8e-66 256.9 437 42.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 3.1e-66 256.1 290 52.4
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 8.5e-64 248.1 310 44.8
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 6.6e-56 221.9 180 67.2
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 9.5e-55 218.0 183 61.7
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 4.6e-49 199.1 177 61.0
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.7e-48 197.2 134 73.1
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 2.8e-46 189.9 124 73.4
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 6.2e-46 188.7 111 76.6
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 6.8e-45 185.3 95 93.7
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 1.6e-41 174.1 163 58.3
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 2.7e-41 173.3 202 54.5
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 8.1e-38 161.8 285 35.8
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.3e-37 160.2 96 76.0
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 5.2e-37 159.1 116 71.6
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 1.7e-32 144.1 85 80.0
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 9.5e-31 138.3 152 48.7
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 9.9e-28 128.3 335 28.4
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 2.2e-27 127.1 279 33.3
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 7.8e-25 118.6 70 81.4
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 6.6e-24 115.5 157 43.9
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.9e-23 114.0 138 42.0
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 5.8e-20 102.4 93 59.1
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.4e-19 99.0 83 63.9
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.7e-17 93.6 80 63.8
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.8e-14 83.6 91 54.9
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.4e-10 70.5 31 87.1
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.7e-09 67.0 83 48.2
HanXRQChr09g0274411 Helianthus annuus HOM05D005614 ORTHO05D006759 3.5e-09 66.6 36 88.9
SalBow3G3353 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.3e-08 64.7 65 56.9


User provided reference genes

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