Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2036 Erigeron canadensis HOM05D003177 ORTHO05D003481 2.7e-180 635.2 316 100.0
Phvul.011G140050 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 6.9e-43 178.7 230 40.4
Nitab4.5_0000397g0040 Nicotiana tabacum HOM05D003177 ORTHO05D003481 2.9e-41 173.3 205 41.0
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 6.5e-41 172.2 215 38.6
Nitab4.5_0009192g0010 Nicotiana tabacum HOM05D003177 ORTHO05D003481 6.5e-41 172.2 205 40.5
Prupe.4G202300 Prunus persica HOM05D003177 ORTHO05D003481 6.5e-41 172.2 251 35.5
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 2.1e-39 167.2 264 34.5
MD03G1211600 Malus domestica HOM05D003177 ORTHO05D003481 4.7e-39 166.0 312 32.1
Cpa.g.sc97.68 Carica papaya HOM05D003177 ORTHO05D003481 6.1e-39 165.6 251 33.9
FAN11G2546 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.0e-38 164.9 206 38.3
FvH4_3g21820 Fragaria vesca HOM05D003177 ORTHO05D003481 1.4e-38 164.5 206 38.3
Glyma.06G268800 Glycine max HOM05D003177 ORTHO05D003481 1.8e-38 164.1 206 39.3
TWI39G1173 Tripterygium wilfordii HOM05D003177 ORTHO05D003481 2.3e-38 163.7 214 37.4
FAN03G0141 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.0e-38 163.3 206 37.9
FAN10G2257 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.0e-38 163.3 206 37.9
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.0e-38 163.3 207 38.2
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 3.9e-38 162.9 248 34.3
Phvul.003G295700 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 1.1e-37 161.4 215 40.0
CANSAT11G2707 Cannabis sativa HOM05D003177 ORTHO05D003481 2.6e-37 160.2 203 37.4
CiPaw.11G183800 Carya illinoinensis HOM05D003177 ORTHO05D003481 2.6e-37 160.2 215 35.8
FAN01G1176 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.6e-37 160.2 206 37.4
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.6e-37 160.2 205 38.0
ATR0794G044 Amborella trichopoda HOM05D003177 ORTHO05D003481 4.4e-37 159.5 251 35.1
FAN06G1056 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.3e-36 157.9 206 36.9
FvH4_7g08040 Fragaria vesca HOM05D003177 ORTHO05D003481 2.2e-36 157.1 206 37.4
Oeu007628.1 Olea europaea HOM05D003177 ORTHO05D003481 4.8e-36 156.0 228 34.2
Thhalv10024397m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 8.2e-36 155.2 205 37.1
Ca_18849_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 1.1e-35 154.8 206 37.4
A01p13180 Brassica napus HOM05D003177 ORTHO05D003481 5.3e-35 152.5 205 35.1
Lalb_Chr14g0366151 Lupinus albus HOM05D003177 ORTHO05D003481 5.3e-35 152.5 302 31.8
BcaC09g51192 Brassica carinata HOM05D003177 ORTHO05D003481 9.1e-35 151.8 205 35.1
C01p15880 Brassica napus HOM05D003177 ORTHO05D003481 9.1e-35 151.8 205 35.1
BolC1t01542H Brassica oleracea HOM05D003177 ORTHO05D003481 9.1e-35 151.8 205 35.1
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea HOM05D003177 ORTHO05D003481 2.0e-34 150.6 209 36.4
CARHR228640 Cardamine hirsuta HOM05D003177 ORTHO05D003481 2.0e-34 150.6 210 34.8
Psat7g161600 Pisum sativum HOM05D003177 ORTHO05D003481 2.6e-34 150.2 206 36.4
Carub.0007s1949 Capsella rubella HOM05D003177 ORTHO05D003481 3.5e-34 149.8 205 35.1
PGR031G3084 Punica granatum HOM05D003177 ORTHO05D003481 3.5e-34 149.8 218 35.8
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea HOM05D003177 ORTHO05D003481 4.5e-34 149.4 233 34.3
COL.COLO4_09572 Corchorus olitorius HOM05D003177 ORTHO05D003481 5.9e-34 149.1 205 35.6
Zm00001eb231370 Zea mays HOM05D003177 ORTHO05D003481 5.9e-34 149.1 212 34.9
PSO675G6436 Papaver somniferum HOM05D003177 ORTHO05D003481 7.7e-34 148.7 205 36.6
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.7e-33 147.5 233 33.9
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea HOM05D003177 ORTHO05D003481 1.7e-33 147.5 233 33.9
ECA246G0280 Erigeron canadensis HOM05D003177 ORTHO05D003481 1.7e-33 147.5 203 34.5
Lj3g0020379 Lotus japonicus HOM05D003177 ORTHO05D003481 1.7e-33 147.5 206 36.9
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea HOM05D003177 ORTHO05D003481 2.2e-33 147.1 233 33.5
HPP92_004136 Vanilla planifolia HOM05D003177 ORTHO05D003481 3.8e-33 146.4 215 36.7
Lj3g0022760 Lotus japonicus HOM05D003177 ORTHO05D003481 5.0e-33 146.0 205 35.1
Sp7g20030 Schrenkiella parvula HOM05D003177 ORTHO05D003481 6.5e-33 145.6 205 34.6
Medtr4g081220 Medicago truncatula HOM05D003177 ORTHO05D003481 8.5e-33 145.2 206 36.9
Sed0011296 Sechium edule HOM05D003177 ORTHO05D003481 8.5e-33 145.2 206 36.4
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 8.5e-33 145.2 207 33.8
BcaNung02254 Brassica carinata HOM05D003177 ORTHO05D003481 4.2e-32 142.9 205 33.7
BraA01t01262Z Brassica rapa HOM05D003177 ORTHO05D003481 5.5e-32 142.5 208 34.1
BcaB01g01838 Brassica carinata HOM05D003177 ORTHO05D003481 2.7e-31 140.2 213 32.9
PGSC0003DMG400019225 Solanum tuberosum HOM05D003177 ORTHO05D003481 2.7e-31 140.2 211 33.6
MELO3C018128.2 Cucumis melo HOM05D003177 ORTHO05D003481 6.1e-31 139.0 219 33.3
Glyma.13G287400 Glycine max HOM05D003177 ORTHO05D003481 6.1e-31 139.0 204 36.8
ClCG05G014770 Citrullus lanatus HOM05D003177 ORTHO05D003481 1.8e-30 137.5 206 34.5
Thhalv10028431m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 3.0e-30 136.7 214 32.7
TPR.G25924 Trifolium pratense HOM05D003177 ORTHO05D003481 3.0e-30 136.7 209 34.4
BcaC04g21326 Brassica carinata HOM05D003177 ORTHO05D003481 4.0e-30 136.3 213 32.9
C09p33110 Brassica napus HOM05D003177 ORTHO05D003481 4.0e-30 136.3 213 32.9
BolC9t56146H Brassica oleracea HOM05D003177 ORTHO05D003481 4.0e-30 136.3 213 32.9
Sed0011648 Sechium edule HOM05D003177 ORTHO05D003481 4.0e-30 136.3 205 34.6
A09p26090 Brassica napus HOM05D003177 ORTHO05D003481 5.2e-30 136.0 213 32.9
BraA09t38176Z Brassica rapa HOM05D003177 ORTHO05D003481 5.2e-30 136.0 213 32.9
AUR62015646 Chenopodium quinoa HOM05D003177 ORTHO05D003481 5.2e-30 136.0 299 27.4
Sp6g04150 Schrenkiella parvula HOM05D003177 ORTHO05D003481 6.7e-30 135.6 213 31.9
CsaV3_3G022860 Cucumis sativus L. HOM05D003177 ORTHO05D003481 8.8e-30 135.2 219 34.2
Lj4g0006066 Lotus japonicus HOM05D003177 ORTHO05D003481 2.6e-29 133.7 205 35.1
Thecc.07G052500 Theobroma cacao HOM05D003177 ORTHO05D003481 2.8e-28 130.2 206 33.0
Dinv22304 Davidia involucrata HOM05D003177 ORTHO05D003481 2.4e-27 127.1 152 36.8
THA.LOC104813041 Tarenaya hassleriana HOM05D003177 ORTHO05D003481 2.4e-27 127.1 310 28.4
DCAR_008676 Daucus carota HOM05D003177 ORTHO05D003481 1.2e-26 124.8 204 30.4
HanXRQChr05g0159201 Helianthus annuus HOM05D003177 ORTHO05D003481 2.0e-26 124.0 203 32.0
PSO541G2106 Papaver somniferum HOM05D003177 ORTHO05D003481 1.3e-25 121.3 205 33.2
unitig_749.g13972 Utricularia gibba HOM05D003177 ORTHO05D003481 1.3e-25 121.3 212 29.7
MSTRG.14415 Avicennia marina HOM05D003177 ORTHO05D003481 2.2e-25 120.6 205 28.8
QL08p013320 Quercus lobata HOM05D003177 ORTHO05D003481 2.5e-24 117.1 205 29.8
Actinidia10706 Actinidia chinensis HOM05D003177 ORTHO05D003481 1.2e-23 114.8 149 34.9
GSVIVG01014607001 Vitis vinifera HOM05D003177 ORTHO05D003481 2.1e-23 114.0 155 36.8
Manes.03G122901 Manihot esculenta HOM05D003177 ORTHO05D003481 8.0e-23 112.1 146 36.3
Peaxi162Scf01086g00156 Petunia axillaris HOM05D003177 ORTHO05D003481 8.0e-23 112.1 151 35.1
Lj1C863T22 Lonicera japonica HOM05D003177 ORTHO05D003481 1.4e-22 111.3 164 34.8
Ciclev10008545m.g Citrus clementina HOM05D003177 ORTHO05D003481 2.3e-22 110.5 215 28.4
Sopen07g032250 Solanum pennellii HOM05D003177 ORTHO05D003481 2.3e-22 110.5 148 35.8
CAN.G337.147 Capsicum annuum HOM05D003177 ORTHO05D003481 3.0e-22 110.2 151 35.8
RcHm_v2.0_Chr4g0410111 Rosa chinensis HOM05D003177 ORTHO05D003481 3.0e-22 110.2 151 35.8
Duzib213G0670 Durio zibethinus HOM05D003177 ORTHO05D003481 5.2e-22 109.4 149 35.6
Duzib268G0600 Durio zibethinus HOM05D003177 ORTHO05D003481 8.8e-22 108.6 152 36.2
Solyc07g064110.3 Solanum lycopersicum HOM05D003177 ORTHO05D003481 2.6e-21 107.1 144 36.1
Nn1g03661 Nelumbo nucifera HOM05D003177 ORTHO05D003481 3.4e-21 106.7 149 34.9
Gohir.D01G061200 Gossypium hirsutum HOM05D003177 ORTHO05D003481 4.4e-21 106.3 251 27.5
Gorai.002G082600 Gossypium raimondii HOM05D003177 ORTHO05D003481 4.4e-21 106.3 251 27.5
TAR629G1976 Trochodendron aralioides HOM05D003177 ORTHO05D003481 5.7e-21 105.9 138 37.0
CSS0012105 Camellia sinensis var. sinensis HOM05D003177 ORTHO05D003481 9.8e-21 105.1 145 33.8
Eucgr.F03427 Eucalyptus grandis HOM05D003177 ORTHO05D003481 9.8e-21 105.1 142 37.3
Gohir.A01G074600 Gossypium hirsutum HOM05D003177 ORTHO05D003481 9.8e-21 105.1 251 27.1
Lalb_Chr19g0134751 Lupinus albus HOM05D003177 ORTHO05D003481 2.2e-20 104.0 150 36.0
Potri.001G417400 Populus trichocarpa HOM05D003177 ORTHO05D003481 2.2e-20 104.0 146 34.2
CDE12G0546 Ceratophyllum demersum HOM05D003177 ORTHO05D003481 2.8e-20 103.6 175 29.1
Aqoxy4G02069 Aquilegia oxysepala HOM05D003177 ORTHO05D003481 1.4e-19 101.3 144 34.0
Glyma.12G214200 Glycine max HOM05D003177 ORTHO05D003481 1.8e-19 100.9 152 34.9
Lsat_1_v5_gn_5_5721 Lactuca sativa HOM05D003177 ORTHO05D003481 3.1e-19 100.1 134 38.1
arahy.Tifrunner.gnm1.ann1.2TAV4H Arachis hypogaea HOM05D003177 ORTHO05D003481 1.2e-18 98.2 149 33.6
AT4G04790 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 1.7e-17 94.4 213 26.8
vmacro11767 Vaccinium macrocarpon HOM05D003177 ORTHO05D003481 1.7e-17 94.4 168 30.4
Sc19g0005940 Simmondsia chinensis HOM05D003177 ORTHO05D003481 2.9e-17 93.6 137 35.0
Cfa020414 Carpinus fangiana HOM05D003177 ORTHO05D003481 3.8e-17 93.2 145 31.0
AL6G48280 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 5.0e-17 92.8 213 26.3
AT4G21880 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 5.0e-17 92.8 146 32.9
AL7G32020 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 1.9e-16 90.9 146 32.9
CsaV3_UNG229000 Cucumis sativus L. HOM05D003177 ORTHO05D003481 3.2e-16 90.1 200 30.0
Carub.0006s3271 Capsella rubella HOM05D003177 ORTHO05D003481 1.2e-15 88.2 213 25.8
Medtr8g070020 Medicago truncatula HOM05D003177 ORTHO05D003481 1.8e-14 84.3 139 36.0
Aa31LG9G9680 Aethionema arabicum HOM05D003177 ORTHO05D003481 4.0e-14 83.2 133 32.3
Medtr4g133410 Medicago truncatula HOM05D003177 ORTHO05D003481 4.0e-14 83.2 139 36.0
EL10Ac4g07970 Beta vulgaris HOM05D003177 ORTHO05D003481 1.2e-13 81.6 138 31.9
Medtr5g034890 Medicago truncatula HOM05D003177 ORTHO05D003481 1.5e-13 81.3 100 40.0
CARHR252740 Cardamine hirsuta HOM05D003177 ORTHO05D003481 2.0e-13 80.9 140 30.0
Glyma.12G135500 Glycine max HOM05D003177 ORTHO05D003481 8.3e-12 75.5 115 33.9
VMungo1127G0088 Vigna mungo HOM05D003177 ORTHO05D003481 1.4e-11 74.7 76 42.1
Actinidia35317 Actinidia chinensis HOM05D003177 ORTHO05D003481 5.4e-11 72.8 158 28.5
Medtr7g025580 Medicago truncatula HOM05D003177 ORTHO05D003481 7.0e-11 72.4 227 25.1
Cpa.g.sc4.211 Carica papaya HOM05D000001 ORTHO05D000003 1.5e-08 64.7 147 31.3
Haze_09912 Corylus avellana HOM05D000001 ORTHO05D011563 1.5e-08 64.7 127 30.7
Eucgr.G00523 Eucalyptus grandis HOM05D003177 ORTHO05D003481 1.9e-08 64.3 85 36.5
RcHm_v2.0_Chr5g0037551 Rosa chinensis HOM05D003177 ORTHO05D003481 3.3e-08 63.5 64 42.2
PSO170G2984 Papaver somniferum HOM05D000001 ORTHO05D000003 7.2e-08 62.4 179 24.6
Medtr7g025530 Medicago truncatula HOM05D003177 ORTHO05D003481 1.2e-07 61.6 132 29.5
FvH4_2g11440 Fragaria vesca HOM05D000001 ORTHO05D000003 1.6e-07 61.2 229 24.5
Manes.01G180400 Manihot esculenta HOM05D000001 ORTHO05D000003 3.6e-07 60.1 151 25.8
Dinv43528 Davidia involucrata HOM05D000001 ORTHO05D000003 4.7e-07 59.7 157 29.9
AagrBONN_evm.TU.Sc2ySwM_362.2765 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.1e-07 59.3 201 22.9
PSO151G0013 Papaver somniferum HOM05D000001 ORTHO05D000003 6.1e-07 59.3 145 26.9
Cc06_g06730 Coffea canephora HOM05D000001 ORTHO05D000003 8.0e-07 58.9 165 27.3
AagrBONN_evm.TU.Sc2ySwM_228.5543 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.0e-06 58.5 187 25.7
SMO228G0102 Selaginella moellendorffii HOM05D000001 ORTHO05D000003 1.4e-06 58.2 130 28.5
MSTRG.6303 Avicennia marina HOM05D000001 ORTHO05D000003 1.8e-06 57.8 157 22.3
ClCG09G003010 Citrullus lanatus HOM05D000001 ORTHO05D000003 1.8e-06 57.8 159 25.2
Migut.K00830 Erythranthe guttata HOM05D000001 ORTHO05D009545 1.8e-06 57.8 166 24.1
Lsat_1_v5_gn_9_28621 Lactuca sativa HOM05D000001 ORTHO05D000003 1.8e-06 57.8 145 29.0
Nn1g05182 Nelumbo nucifera HOM05D000001 ORTHO05D000003 1.8e-06 57.8 140 27.9
Pp3c2_1560 Physcomitrium patens HOM05D015612 ORTHO05D050301 1.8e-06 57.8 244 20.9
arahy.Tifrunner.gnm1.ann1.PSAJ1X Arachis hypogaea HOM05D003177 ORTHO05D003481 2.3e-06 57.4 89 31.5
VMungo0647G2323 Vigna mungo HOM05D000001 ORTHO05D006238 2.3e-06 57.4 232 22.8
Nitab4.5_0005913g0040 Nicotiana tabacum HOM05D007402 ORTHO05D003673 3.0e-06 57.0 199 25.6
Oeu015150.1 Olea europaea HOM05D000001 ORTHO05D000003 3.0e-06 57.0 208 20.2
HPP92_019897 Vanilla planifolia HOM05D000001 ORTHO05D000003 4.0e-06 56.6 109 33.0
PGR044G2592 Punica granatum HOM05D000001 ORTHO05D000003 5.2e-06 56.2 148 25.7
THA.LOC104819989 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 5.2e-06 56.2 167 22.2
GSVIVG01022230001 Vitis vinifera HOM05D000001 ORTHO05D000003 6.8e-06 55.8 187 24.1
Aa31LG6G14940 Aethionema arabicum HOM05D000001 ORTHO05D000003 8.9e-06 55.5 170 22.9
CARHR238580 Cardamine hirsuta HOM05D000001 ORTHO05D000003 8.9e-06 55.5 221 24.4
Cfa016837 Carpinus fangiana HOM05D000001 ORTHO05D000003 8.9e-06 55.5 132 25.8
Rhsim10G0182600 Rhododendron simsii HOM05D000001 ORTHO05D010426 8.9e-06 55.5 144 27.8


User provided reference genes

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