Gene: PGR044G2592
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G2592
- Transcript Identifier PGR044G2592.01
- Gene Type Coding gene
- Location NC_045134.1 : 1703743-1706118 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031373885.1
- name LOC116188577
- name XM_031518025.1
- id gene-LOC116188577
- uniprot A0A218XTG4
Descriptions
- product pentatricopeptide repeat-containing protein At4g30700
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080156 | ISO | PLAZA Integrative Orthology | mitochondrial mRNA modification | AT4G30700 |
| GO:0000963 | ISO | PLAZA Integrative Orthology | mitochondrial RNA processing | AT4G30700 |
| GO:0016554 | ISO | PLAZA Integrative Orthology | cytidine to uridine editing | AT4G30700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G30700 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G30700 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.4.22 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29) |