Gene: AT4G21880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G21880
  • Transcript Identifier AT4G21880.1
  • Gene Type Coding gene
  • Location Chr4 : 11605156-11610651 : positive

Gene Family Information

  • ID HOM05D003177
  • #Genes/#Species 215/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G21880.1
  • uniprot O49711

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein
  • Computational description Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G04790.1); Has 19249 Blast hits to 9796 proteins in 234 species: Archae - 1; Bacteria - 14; Metazoa - 252; Fungi - 115; Plants - 18394; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated