Gene: THA.LOC104819989

General Information

Structural Information

Species Tarenaya hassleriana
Gene Identifier THA.LOC104819989
Transcript Identifier THA.XM_010550331.2
Gene Type Coding gene
Location NW_010966177.1 : 8313024-8315417 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

GeneID 104819989
RefSeq XP_010548633.1
RefSeq XM_010550331.2
tid rna26377
id gene17109

Descriptions

Short descriptions
Ortholog descriptions

Description pentatricopeptide repeat-containing protein At4g30700

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080156	ISO	PLAZA Integrative Orthology	mitochondrial mRNA modification	AT4G30700
GO:0000963	ISO	PLAZA Integrative Orthology	mitochondrial RNA processing	AT4G30700
GO:0016554	ISO	PLAZA Integrative Orthology	cytidine to uridine editing	AT4G30700

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G30700
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT4G30700

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
16.11.3.3.4.22	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29)