Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1011 Erigeron canadensis HOM05D002112 ORTHO05D010865 1.8e-43 178.7 83 100.0
Manes.15G067500 Manihot esculenta HOM05D002112 ORTHO05D005377 9.1e-11 70.1 54 63.0
Medtr5g093570 Medicago truncatula HOM05D002112 ORTHO05D005377 9.1e-11 70.1 53 66.0
Lsat_1_v5_gn_7_113801 Lactuca sativa HOM05D002112 ORTHO05D005377 1.2e-10 69.7 53 66.0
TAR627G0566 Trochodendron aralioides HOM05D002112 ORTHO05D005377 1.2e-10 69.7 53 66.0
Aa31LG10G3690 Aethionema arabicum HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 64.2
Cc05_g14160 Coffea canephora HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 64.2
ECA236G4434 Erigeron canadensis HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 66.0
ECA246G0156 Erigeron canadensis HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 66.0
HanXRQChr08g0233571 Helianthus annuus HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 66.0
Nn1g03399 Nelumbo nucifera HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 64.2
Zm00001eb178070 Zea mays HOM05D002112 ORTHO05D005377 1.6e-10 69.3 53 66.0
Migut.H01801 Erythranthe guttata HOM05D002112 ORTHO05D005377 2.0e-10 68.9 53 62.3
VMungo0647G2153 Vigna mungo HOM05D002112 ORTHO05D005377 2.0e-10 68.9 54 63.0
ATR0772G119 Amborella trichopoda HOM05D002112 ORTHO05D005377 2.7e-10 68.6 53 64.2
Dinv22241 Davidia involucrata HOM05D002089 ORTHO05D005377 2.7e-10 68.6 53 62.3
Psat2g012520 Pisum sativum HOM05D002112 ORTHO05D005377 2.7e-10 68.6 53 64.2
Sed0025734 Sechium edule HOM05D002112 ORTHO05D005377 2.7e-10 68.6 53 64.2
THA.LOC104817853 Tarenaya hassleriana HOM05D002112 ORTHO05D005377 2.7e-10 68.6 53 64.2
TPR.G1169 Trifolium pratense HOM05D002112 ORTHO05D005377 2.7e-10 68.6 53 64.2
Zm00001eb412930 Zea mays HOM05D002112 ORTHO05D005377 2.7e-10 68.6 53 64.2
Ciclev10025758m.g Citrus clementina HOM05D002112 ORTHO05D005377 3.5e-10 68.2 53 66.0
HanXRQChr15g0470591 Helianthus annuus HOM05D002112 ORTHO05D005377 3.5e-10 68.2 53 64.2
Lsat_1_v5_gn_5_3200 Lactuca sativa HOM05D002112 ORTHO05D005377 3.5e-10 68.2 53 64.2
MBI06_g04395_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005377 3.5e-10 68.2 53 64.2
Os08g0248800 Oryza sativa ssp. japonica HOM05D002112 ORTHO05D005377 3.5e-10 68.2 53 64.2
TAR629G1251 Trochodendron aralioides HOM05D002112 ORTHO05D005377 3.5e-10 68.2 53 62.3
Atru.chr1.3234 Acer truncatum HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
BcaB06g26098 Brassica carinata HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
CSS0017930 Camellia sinensis var. sinensis HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 64.2
CAN.G532.29 Capsicum annuum HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
AUR62015837 Chenopodium quinoa HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
Lj1A879T54 Lonicera japonica HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 64.2
Peaxi162Scf00493g00312 Petunia axillaris HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
Pp3c1_7810 Physcomitrium patens HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
Rhsim06G0222300 Rhododendron simsii HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 64.2
PGSC0003DMG400000980 Solanum tuberosum HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 62.3
SGA_v2.0_scaffold120G32847 Striga asiatica HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 64.2
vmacro22326 Vaccinium macrocarpon HOM05D002112 ORTHO05D005377 4.5e-10 67.8 53 64.2
AL3G34050 Arabidopsis lyrata HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
AT3G20330 Arabidopsis thaliana HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
BolC5t33119H Brassica oleracea HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Carub.0003s2028 Capsella rubella HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
CARHR095980 Cardamine hirsuta HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
AUR62020382 Chenopodium quinoa HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 60.4
Dinv40788 Davidia involucrata HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Thhalv10020870m.g Eutrema salsugineum HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Glyma.14G021000 Glycine max HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Hma1.2p1_0036F.1_g023230 Hydrangea macrophylla HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 64.2
Nn1g07265 Nelumbo nucifera HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Oeu013123.1 Olea europaea HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Pp3c11_8230 Physcomitrium patens HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 60.4
Rhsim09G0178000 Rhododendron simsii HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
Hund23211 Selenicereus undatus HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 62.3
TWI39G1031 Tripterygium wilfordii HOM05D002112 ORTHO05D005377 5.9e-10 67.4 53 64.2
Aqoxy1G02961 Aquilegia oxysepala HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
Aqoxy2G01186 Aquilegia oxysepala HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
arahy.Tifrunner.gnm1.ann1.MLP8YM Arachis hypogaea HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
MSTRG.14456 Avicennia marina HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
EL10Ac4g07746 Beta vulgaris HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
C01p43760 Brassica napus HOM05D002112 ORTHO05D005377 7.7e-10 67.0 48 64.6
COL.COLO4_09707 Corchorus olitorius HOM05D002112 ORTHO05D005377 7.7e-10 67.0 51 62.7
Glyma.02G293500 Glycine max HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
Glyma.05G131400 Glycine max HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 60.4
LjContig00272g0002880 Lotus japonicus HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
Lalb_Chr12g0209021 Lupinus albus HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 64.2
Sp6g12890 Schrenkiella parvula HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
Solyc11g006350.1 Solanum lycopersicum HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
Sopen11g002250 Solanum pennellii HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
GSVIVG01037706001 Vitis vinifera HOM05D002112 ORTHO05D005377 7.7e-10 67.0 53 62.3
arahy.Tifrunner.gnm1.ann1.SM06HE Arachis hypogaea HOM05D002112 ORTHO05D005377 1.0e-09 66.6 45 68.9
CSS0048828 Camellia sinensis var. sinensis HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
FvH4_7g16631 Fragaria vesca HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
FAN01G2257 Fragaria x ananassa HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
FAN06G0459 Fragaria x ananassa HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
FAN06G2468 Fragaria x ananassa HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
Nitab4.5_0001907g0020 Nicotiana tabacum HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 60.4
PSO063G0678 Papaver somniferum HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
RcHm_v2.0_Chr6g0264841 Rosa chinensis HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 62.3
Thecc.07G030500 Theobroma cacao HOM05D002112 ORTHO05D005377 1.0e-09 66.6 53 60.4
BcaB04g20659 Brassica carinata HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
BcaC09g48987 Brassica carinata HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
Cfa020294 Carpinus fangiana HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 62.3
Haze_09725 Corylus avellana HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 62.3
FAN03G2363 Fragaria x ananassa HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
FAN07G1453 Fragaria x ananassa HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
Lj3A865T85 Lonicera japonica HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
MD15G1397500 Malus domestica HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 62.3
Nitab4.5_0002649g0050 Nicotiana tabacum HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
Prupe.4G221200 Prunus persica HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 62.3
Sp3g18360 Schrenkiella parvula HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 60.4
unitig_8.g4479 Utricularia gibba HOM05D002112 ORTHO05D005377 1.3e-09 66.2 53 62.3
Ah.06g182500 Amaranthus hybridus HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Cpa.g.sc12.257 Carica papaya HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Gohir.1Z049537 Gossypium hirsutum HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Gohir.D05G373500 Gossypium hirsutum HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Gorai.009G442200 Gossypium raimondii HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Lsat_1_v5_gn_0_47481 Lactuca sativa HOM05D002112 ORTHO05D005377 1.7e-09 65.9 61 57.4
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 1.7e-09 65.9 53 62.3
Potri.001G357200 Populus trichocarpa HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
PGR083G0908 Punica granatum HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Sabra16G0235200 Salix brachista HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
Sc06g0004500 Simmondsia chinensis HOM05D002112 ORTHO05D005377 1.7e-09 65.9 53 60.4
DCAR_013195 Daucus carota HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 60.4
Eucgr.F03492 Eucalyptus grandis HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 62.3
Phvul.008G270600 Phaseolus vulgaris HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 60.4
QL06p008756 Quercus lobata HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 58.5
QL08p007027 Quercus lobata HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 58.5
RcHm_v2.0_Chr4g0402721 Rosa chinensis HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 60.4
SEGI_29547 Sequoiadendron giganteum HOM05D002112 ORTHO05D005377 2.2e-09 65.5 53 60.4
arahy.Tifrunner.gnm1.ann1.ZASA6B Arachis hypogaea HOM05D002112 ORTHO05D005377 2.9e-09 65.1 53 60.4
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 2.9e-09 65.1 53 60.4
ClCG10G005230 Citrullus lanatus HOM05D002112 ORTHO05D005377 2.9e-09 65.1 53 58.5
MELO3C014189.2 Cucumis melo HOM05D002112 ORTHO05D005377 2.9e-09 65.1 53 58.5
CsaV3_3G004920 Cucumis sativus L. HOM05D002112 ORTHO05D005377 2.9e-09 65.1 53 58.5
arahy.Tifrunner.gnm1.ann1.4VH6VS Arachis hypogaea HOM05D002112 ORTHO05D005377 3.8e-09 64.7 45 66.7
CiPaw.11G193600 Carya illinoinensis HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 60.4
Ca_06342_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 58.5
Duzib213G0660 Durio zibethinus HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 58.5
Glyma.08G086000 Glycine max HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 58.5
Medtr4g096900 Medicago truncatula HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 58.5
PGR031G2540 Punica granatum HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 60.4
PGR093G0005 Punica granatum HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 60.4
TWI38G1671 Tripterygium wilfordii HOM05D002112 ORTHO05D005377 3.8e-09 64.7 53 60.4
BolC1t04335H Brassica oleracea HOM05D002112 ORTHO05D005377 6.5e-09 63.9 42 69.0
CDE12G0428 Ceratophyllum demersum HOM05D002112 ORTHO05D005377 6.5e-09 63.9 53 60.4
Ca_18260_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005377 6.5e-09 63.9 53 58.5
Lsat_1_v5_gn_3_138320 Lactuca sativa HOM05D002112 ORTHO05D005377 1.1e-08 63.2 53 60.4
Mapoly0135s0050 Marchantia polymorpha HOM05D002112 ORTHO05D005377 1.1e-08 63.2 53 54.7
Psat7g089200 Pisum sativum HOM05D002112 ORTHO05D005377 1.1e-08 63.2 53 56.6
SMO339G0015 Selaginella moellendorffii HOM05D002112 ORTHO05D005377 1.1e-08 63.2 53 58.5
SEGI_07334 Sequoiadendron giganteum HOM05D002112 ORTHO05D010865 1.1e-08 63.2 78 46.2
TPR.G2908 Trifolium pratense HOM05D002112 ORTHO05D005377 1.1e-08 63.2 53 54.7
AagrBONN_evm.TU.Sc2ySwM_368.189 Anthoceros agrestis HOM05D002112 ORTHO05D005377 1.5e-08 62.8 53 56.6
Glyma.09G110200 Glycine max HOM05D002112 ORTHO05D005377 1.5e-08 62.8 53 56.6
Actinidia05072 Actinidia chinensis HOM05D002112 ORTHO05D005377 2.5e-08 62.0 54 57.4
CANSAT01G0306 Cannabis sativa HOM05D002112 ORTHO05D005377 3.2e-08 61.6 53 56.6
SHI26581 Sapria himalayana HOM05D002112 ORTHO05D005377 3.2e-08 61.6 53 58.5
CAN.G166.12 Capsicum annuum HOM05D002112 ORTHO05D005377 7.2e-08 60.5 58 50.0
CBR_g4282 Chara braunii HOM05D002112 ORTHO05D005377 7.2e-08 60.5 53 54.7
FvH4_4g09330 Fragaria vesca HOM05D002112 ORTHO05D005377 9.4e-08 60.1 53 56.6
MCO06G271 Micromonas commoda HOM05D002112 ORTHO05D005377 9.4e-08 60.1 53 54.7
Actinidia32272 Actinidia chinensis HOM05D009260 ORTHO05D010865 1.2e-07 59.7 45 64.4
A01p34350 Brassica napus HOM05D002112 ORTHO05D005377 1.6e-07 59.3 39 66.7
BraA01t03532Z Brassica rapa HOM05D002112 ORTHO05D005377 6.1e-07 57.4 53 54.7
FAN12G4101 Fragaria x ananassa HOM05D002112 ORTHO05D005377 6.1e-07 57.4 42 64.3
Cre02.g079700 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D005377 3.0e-06 55.1 53 49.1


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