Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 4.1e-128 462.6 539 100.0
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 1.4e-107 394.4 539 76.6
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 3.5e-103 379.8 539 76.4
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 1.4e-80 304.7 529 72.0
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 1.3e-78 298.1 539 66.4
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 5.1e-78 296.2 539 66.6
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 2.1e-76 290.8 538 66.9
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 3.6e-76 290.0 532 68.2
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 3.1e-75 287.0 533 69.4
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 1.5e-74 284.6 529 70.9
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 2.0e-74 284.3 532 65.2
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 7.6e-74 282.3 539 68.1
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 2.2e-73 280.8 533 69.2
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 1.4e-72 278.1 530 69.4
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 1.4e-72 278.1 537 66.9
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 2.4e-72 277.3 534 66.1
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 3.2e-72 276.9 541 67.3
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 4.2e-72 276.6 531 68.7
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 4.2e-72 276.6 532 66.5
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 4.2e-72 276.6 529 66.0
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 2.1e-71 274.2 532 65.8
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 7.9e-71 272.3 532 64.1
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 3.9e-70 270.0 533 65.7
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 1.1e-69 268.5 534 64.8
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 1.5e-69 268.1 533 64.0
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 1.5e-69 268.1 534 67.0
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 4.3e-69 266.5 538 64.1
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 5.6e-69 266.2 560 64.1
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 1.8e-67 261.2 526 63.5
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 5.3e-67 259.6 528 66.1
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 4.5e-66 256.5 532 66.7
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 2.2e-65 254.2 533 64.5
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.9e-65 253.8 533 64.0
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 1.4e-64 251.5 532 67.9
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 4.2e-64 250.0 537 62.8
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 1.6e-63 248.1 538 61.2
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 2.1e-63 247.7 539 65.7
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 7.9e-63 245.7 528 62.3
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.0e-62 245.4 533 63.0
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 1.0e-62 245.4 525 67.4
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 1.3e-62 245.0 539 66.0
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 1.3e-62 245.0 531 63.8
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.3e-62 245.0 529 58.8
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 6.7e-62 242.7 537 58.7
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 8.7e-62 242.3 537 60.7
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 5.7e-61 239.6 537 57.9
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 5.7e-61 239.6 538 62.1
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 5.7e-61 239.6 637 40.8
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 7.4e-61 239.2 538 61.3
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 1.3e-60 238.4 535 66.7
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 1.3e-60 238.4 537 60.1
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 2.1e-60 237.7 537 60.1
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 2.8e-60 237.3 524 64.3
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 3.7e-60 236.9 538 57.6
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 6.2e-60 236.1 531 64.2
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 1.4e-59 235.0 528 61.9
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 1.0e-57 228.8 538 63.2
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 2.2e-57 227.6 529 53.5
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 4.6e-55 219.9 532 58.5
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 4.6e-55 219.9 529 57.8
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 6.1e-55 219.5 539 65.5
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 1.3e-52 211.8 527 63.2
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 1.6e-52 211.5 532 61.3
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 1.4e-51 208.4 218 50.0
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 2.4e-51 207.6 220 50.0
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 2.4e-51 207.6 532 62.0
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 1.4e-48 198.4 215 49.3
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 6.1e-47 193.0 216 47.7
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 1.4e-46 191.8 533 63.4
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 1.5e-45 188.3 536 62.7
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 1.3e-44 185.3 528 63.4
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 1.3e-44 185.3 528 63.4
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 2.6e-42 177.6 531 58.4
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 5.9e-42 176.4 503 37.0
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 1.7e-41 174.9 218 42.7
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 6.5e-41 172.9 534 61.6
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 5.5e-40 169.9 202 45.5
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 2.1e-39 167.9 531 57.8
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 2.3e-38 164.5 229 41.5
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 6.7e-38 162.9 534 61.4
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 1.1e-37 162.2 534 60.3
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 2.0e-37 161.4 492 62.6
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 2.6e-37 161.0 122 63.9
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 1.1e-35 155.6 155 69.0
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 1.0e-33 149.1 152 70.4
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 1.3e-33 148.7 534 57.9
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.1e-32 145.6 154 64.9
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 3.6e-31 140.6 534 61.8
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 6.1e-31 139.8 151 65.6
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 4.1e-27 127.1 140 70.0
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 5.9e-26 123.2 135 65.2
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 1.0e-25 122.5 155 43.9
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 6.5e-25 119.8 112 52.7
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 9.4e-24 115.9 86 61.6
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 8.5e-17 92.8 103 71.8
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 1.9e-16 91.7 76 60.5
Peaxi162Scf00427g00004 Petunia axillaris HOM05D007322 ORTHO05D009029 1.0e-06 59.3 39 64.1
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 2.3e-06 58.2 41 61.0
Sabra07G0055900 Salix brachista HOM05D000293 ORTHO05D009029 2.3e-06 58.2 61 50.8
Sabra17G0065200 Salix brachista HOM05D007322 ORTHO05D009029 8.9e-06 56.2 44 63.6


User provided reference genes

Program Settings