Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 2.7e-269 931.4 474 100.0
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 9.9e-211 736.9 501 77.2
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 6.9e-204 714.1 480 76.5
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 7.9e-192 674.1 458 73.8
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 4.3e-190 668.3 482 70.5
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 3.7e-189 665.2 482 70.3
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 1.1e-188 663.7 482 70.3
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 1.5e-187 659.8 471 71.8
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 2.0e-187 659.4 457 72.2
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 4.5e-187 658.3 477 70.0
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 5.9e-187 657.9 475 71.6
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 7.6e-187 657.5 460 71.7
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 7.6e-187 657.5 481 70.3
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 7.6e-187 657.5 486 71.6
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 3.8e-186 655.2 492 69.9
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 1.9e-185 652.9 464 71.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 4.6e-184 648.3 471 69.4
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 6.1e-184 647.9 502 66.5
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 7.9e-184 647.5 481 70.3
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 1.0e-183 647.1 466 71.2
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.3e-183 646.7 448 71.9
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 1.3e-183 646.7 449 71.0
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 2.3e-183 646.0 437 74.8
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 2.3e-183 646.0 474 71.5
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 2.3e-183 646.0 446 71.7
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 3.0e-183 645.6 475 69.5
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 3.0e-183 645.6 445 71.7
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 3.0e-183 645.6 488 67.4
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 3.9e-183 645.2 438 73.5
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 5.1e-183 644.8 472 70.6
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 5.1e-183 644.8 487 70.0
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 5.1e-183 644.8 436 74.8
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 5.1e-183 644.8 475 70.5
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 5.1e-183 644.8 488 67.4
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 6.7e-183 644.4 467 71.1
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 6.7e-183 644.4 479 69.1
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 1.1e-182 643.7 491 68.6
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 1.5e-182 643.3 509 66.8
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 2.5e-182 642.5 486 67.9
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 9.7e-182 640.6 430 73.7
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 9.7e-182 640.6 446 72.0
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 9.7e-182 640.6 481 68.8
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.3e-181 640.2 487 67.4
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 2.2e-181 639.4 485 69.3
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 2.8e-181 639.0 446 70.6
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 2.8e-181 639.0 435 72.0
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 3.7e-181 638.6 439 74.3
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 3.7e-181 638.6 446 70.6
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 4.8e-181 638.3 450 72.0
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 8.2e-181 637.5 446 72.0
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 1.4e-180 636.7 477 67.7
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 1.4e-180 636.7 471 69.4
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.4e-180 636.0 469 69.1
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 2.4e-180 636.0 487 68.2
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 3.1e-180 635.6 430 72.1
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 5.3e-180 634.8 428 74.5
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 5.3e-180 634.8 475 67.4
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 6.9e-180 634.4 431 73.1
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 1.5e-179 633.3 452 70.1
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 1.5e-179 633.3 434 72.6
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 3.4e-179 632.1 437 72.3
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 5.9e-179 631.3 425 73.9
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 1.3e-178 630.2 430 70.9
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.7e-178 629.8 442 73.8
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 1.1e-177 627.1 429 71.6
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.4e-177 626.7 439 73.1
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.4e-177 626.7 439 73.1
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.9e-177 626.3 467 68.1
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 2.5e-177 625.9 481 66.5
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 2.5e-177 625.9 477 68.1
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.5e-177 625.9 472 67.8
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 3.2e-177 625.5 469 69.3
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 3.2e-177 625.5 504 66.3
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 7.2e-177 624.4 478 66.5
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 7.2e-177 624.4 477 67.9
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 9.4e-177 624.0 449 68.8
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 9.4e-177 624.0 461 69.4
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 1.2e-176 623.6 472 67.6
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 2.1e-176 622.9 477 67.3
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 6.1e-176 621.3 444 69.6
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 7.9e-176 620.9 477 67.5
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 1.0e-175 620.5 459 69.7
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 1.8e-175 619.8 443 69.8
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 1.8e-175 619.8 443 69.8
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 1.8e-175 619.8 463 69.5
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.3e-175 619.4 466 68.2
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 3.9e-175 618.6 477 67.1
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 1.1e-174 617.1 456 68.2
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 4.4e-174 615.1 485 66.2
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 4.4e-174 615.1 449 67.9
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 1.3e-173 613.6 461 68.1
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 2.8e-173 612.5 441 69.4
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 3.7e-173 612.1 465 67.5
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 4.1e-172 608.6 470 66.2
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.5e-171 605.1 472 66.7
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 3.2e-169 599.0 444 68.2
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.6e-168 596.7 430 71.2
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.6e-168 596.7 452 67.5
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 1.8e-167 593.2 507 62.3
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 5.2e-167 591.7 446 66.6
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 6.7e-167 591.3 581 57.3
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 8.8e-167 590.9 500 62.0
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 4.4e-166 588.6 445 66.3
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 4.1e-164 582.0 446 67.9
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 2.0e-163 579.7 430 66.7
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 1.5e-161 573.5 437 65.2
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 3.0e-159 565.8 442 64.5
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 8.0e-152 541.2 441 61.7
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 1.8e-151 540.0 441 63.7
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 7.2e-145 518.1 481 54.9
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 9.2e-140 501.1 319 77.4
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 3.5e-139 499.2 380 66.1
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 1.5e-137 493.8 434 57.8
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 8.9e-135 484.6 450 59.1
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.9e-131 471.9 427 58.8
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 1.7e-130 470.3 498 49.6
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 4.7e-128 462.2 478 51.7
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.1e-127 461.1 457 56.9
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 1.4e-116 424.1 424 55.7
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 2.3e-106 390.2 319 66.1
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.5e-97 360.9 260 69.2
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.8e-82 310.8 429 39.4
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 1.3e-77 294.7 401 44.6
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 2.8e-72 276.9 196 71.4
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 3.1e-71 273.5 400 45.0
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 6.9e-71 272.3 227 59.0
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 8.8e-66 255.4 231 60.2
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 4.8e-64 249.6 174 72.4
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 3.8e-61 240.0 337 45.7
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 7.2e-60 235.7 495 30.9
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 6.7e-58 229.2 286 42.7
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.7e-49 199.5 151 67.5
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 1.8e-47 194.5 390 34.9
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 3.6e-35 153.7 137 56.9
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 1.0e-34 152.1 138 60.1
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.4e-31 141.0 96 67.7
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 8.3e-24 115.9 78 70.5
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 5.6e-20 103.2 111 55.9
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 1.2e-19 102.1 66 72.7
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 2.1e-19 101.3 57 82.5
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 5.2e-18 96.7 71 64.8
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 3.4e-17 94.0 85 62.4
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 9.8e-17 92.4 78 61.5
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 3.0e-13 80.9 59 64.4
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 4.3e-12 77.0 61 60.7
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 4.3e-12 77.0 61 60.7
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 3.1e-10 70.9 72 59.7


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