Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib211G0435 Durio zibethinus HOM05D004616 ORTHO05D005860 6.0e-64 247.3 120 100.0
Duzib150G0968 Durio zibethinus HOM05D004616 ORTHO05D005860 2.8e-45 185.3 100 88.0
Gohir.A09G096900 Gossypium hirsutum HOM05D004616 ORTHO05D005860 3.7e-45 184.9 100 87.0
Gorai.006G113400 Gossypium raimondii HOM05D004616 ORTHO05D005860 3.7e-45 184.9 100 87.0
Gohir.D09G096700 Gossypium hirsutum HOM05D004616 ORTHO05D005860 4.8e-45 184.5 100 87.0
Manes.11G164000 Manihot esculenta HOM05D004616 ORTHO05D005860 6.3e-45 184.1 106 82.1
CiPaw.14G098200 Carya illinoinensis HOM05D004616 ORTHO05D005860 1.1e-44 183.3 100 87.0
Lsat_1_v5_gn_6_38401 Lactuca sativa HOM05D004616 ORTHO05D005860 1.1e-44 183.3 100 87.0
CDE08G0566 Ceratophyllum demersum HOM05D004616 ORTHO05D005860 1.4e-44 183.0 100 86.0
COL.COLO4_34009 Corchorus olitorius HOM05D004616 ORTHO05D005860 2.4e-44 182.2 100 85.0
Haze_23351 Corylus avellana HOM05D004616 ORTHO05D005860 2.4e-44 182.2 103 84.5
Gohir.A07G111000 Gossypium hirsutum HOM05D004616 ORTHO05D005860 2.4e-44 182.2 100 87.0
Aqoxy2G01054 Aquilegia oxysepala HOM05D004616 ORTHO05D005860 4.1e-44 181.4 100 87.0
CANSAT54G1125 Cannabis sativa HOM05D004616 ORTHO05D005860 4.1e-44 181.4 100 86.0
FAN16G2710 Fragaria x ananassa HOM05D004616 ORTHO05D005860 5.3e-44 181.0 100 86.0
FAN21G3247 Fragaria x ananassa HOM05D004616 ORTHO05D005860 5.3e-44 181.0 100 86.0
Lj3g0004055 Lotus japonicus HOM05D004616 ORTHO05D005860 5.3e-44 181.0 100 84.0
QL01p011880 Quercus lobata HOM05D004616 ORTHO05D005860 5.3e-44 181.0 100 85.0
RcHm_v2.0_Chr5g0045751 Rosa chinensis HOM05D004616 ORTHO05D005860 5.3e-44 181.0 100 86.0
CDE06G1573 Ceratophyllum demersum HOM05D004616 ORTHO05D005860 6.9e-44 180.6 100 85.0
Sc06g0008700 Simmondsia chinensis HOM05D004616 ORTHO05D005860 6.9e-44 180.6 100 85.0
Sc12g0004600 Simmondsia chinensis HOM05D004616 ORTHO05D005860 9.1e-44 180.3 100 85.0
Atru.chr3.3173 Acer truncatum HOM05D004616 ORTHO05D005860 1.5e-43 179.5 100 84.0
ECA233G2149 Erigeron canadensis HOM05D004616 ORTHO05D005860 1.5e-43 179.5 100 86.0
FvH4_3g25610 Fragaria vesca HOM05D004616 ORTHO05D005860 1.5e-43 179.5 100 85.0
HanXRQChr13g0397601 Helianthus annuus HOM05D004616 ORTHO05D005860 1.5e-43 179.5 100 86.0
TWI75G1519 Tripterygium wilfordii HOM05D004616 ORTHO05D005860 1.5e-43 179.5 100 85.0
Potri.009G160100 Populus trichocarpa HOM05D004616 ORTHO05D005860 2.0e-43 179.1 100 85.0
Thecc.09G279200 Theobroma cacao HOM05D004616 ORTHO05D005860 2.6e-43 178.7 100 84.0
Dinv22821 Davidia involucrata HOM05D004616 ORTHO05D005860 3.4e-43 178.3 100 85.0
FAN11G2307 Fragaria x ananassa HOM05D004616 ORTHO05D005860 3.4e-43 178.3 100 84.0
Actinidia24228 Actinidia chinensis HOM05D004616 ORTHO05D005860 4.5e-43 177.9 100 83.0
Migut.D02430 Erythranthe guttata HOM05D004616 ORTHO05D005860 4.5e-43 177.9 100 84.0
Glyma.11G181500 Glycine max HOM05D004616 ORTHO05D005860 4.5e-43 177.9 100 84.0
EL10Ac7g16331 Beta vulgaris HOM05D004616 ORTHO05D005860 5.9e-43 177.6 100 83.0
CAN.G919.39 Capsicum annuum HOM05D004616 ORTHO05D005860 5.9e-43 177.6 100 83.0
Glyma.12G091600 Glycine max HOM05D004616 ORTHO05D005860 5.9e-43 177.6 100 84.0
Lj2A968G32 Lonicera japonica HOM05D004616 ORTHO05D005860 5.9e-43 177.6 100 84.0
TAR633G1321 Trochodendron aralioides HOM05D004616 ORTHO05D005860 5.9e-43 177.6 100 84.0
Dinv08937 Davidia involucrata HOM05D004616 ORTHO05D005860 7.7e-43 177.2 100 83.0
HanXRQChr14g0438001 Helianthus annuus HOM05D004616 ORTHO05D005860 7.7e-43 177.2 100 84.0
SGA_v2.0_scaffold100G29603 Striga asiatica HOM05D004616 ORTHO05D005860 7.7e-43 177.2 100 83.0
SGA_v2.0_scaffold22G09840 Striga asiatica HOM05D004616 ORTHO05D005860 7.7e-43 177.2 100 83.0
Ah.08g223540 Amaranthus hybridus HOM05D004616 ORTHO05D005860 1.0e-42 176.8 100 81.0
Cc01_g08850 Coffea canephora HOM05D004616 ORTHO05D005860 1.0e-42 176.8 100 83.0
Peaxi162Scf00224g00117 Petunia axillaris HOM05D004616 ORTHO05D005860 1.0e-42 176.8 114 78.1
Nn6g34808 Nelumbo nucifera HOM05D004616 ORTHO05D005860 1.3e-42 176.4 100 84.0
Oeu031468.1 Olea europaea HOM05D004616 ORTHO05D005860 1.3e-42 176.4 100 84.0
Phvul.011G096000 Phaseolus vulgaris HOM05D004616 ORTHO05D005860 1.3e-42 176.4 100 83.0
Prupe.6G135500 Prunus persica HOM05D004616 ORTHO05D005860 1.3e-42 176.4 100 83.0
CSS0008379 Camellia sinensis var. sinensis HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 82.0
Nitab4.5_0000731g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 83.0
PSO339G4556 Papaver somniferum HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 84.0
PSO801G0782 Papaver somniferum HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 84.0
Solyc06g074220.3 Solanum lycopersicum HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 83.0
Sopen06g030640 Solanum pennellii HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 83.0
PGSC0003DMG400005888 Solanum tuberosum HOM05D004616 ORTHO05D005860 1.7e-42 176.0 100 83.0
Manes.04G001500 Manihot esculenta HOM05D004616 ORTHO05D005860 2.2e-42 175.6 100 83.0
Solyc11g068660.2 Solanum lycopersicum HOM05D004616 ORTHO05D005860 2.9e-42 175.3 100 82.0
Sopen11g027380 Solanum pennellii HOM05D004616 ORTHO05D005860 2.9e-42 175.3 100 82.0
VMungo1127G2084 Vigna mungo HOM05D004616 ORTHO05D005860 2.9e-42 175.3 100 83.0
Hund18773 Selenicereus undatus HOM05D004616 ORTHO05D005860 5.0e-42 174.5 100 82.0
THA.LOC104800519 Tarenaya hassleriana HOM05D004616 ORTHO05D005860 5.0e-42 174.5 100 82.0
BcaB01g03068 Brassica carinata HOM05D004616 ORTHO05D005860 8.5e-42 173.7 100 82.0
TWI79G0721 Tripterygium wilfordii HOM05D004616 ORTHO05D005860 8.5e-42 173.7 100 83.0
GSVIVG01036084001 Vitis vinifera HOM05D004616 ORTHO05D005860 8.5e-42 173.7 100 83.0
MSTRG.18768 Avicennia marina HOM05D004616 ORTHO05D005860 1.1e-41 173.3 100 82.0
CARHR119940 Cardamine hirsuta HOM05D004616 ORTHO05D005860 1.1e-41 173.3 100 81.0
Sabra09G0125300 Salix brachista HOM05D004616 ORTHO05D005860 1.1e-41 173.3 97 84.5
Sed0016133 Sechium edule HOM05D004616 ORTHO05D005860 1.1e-41 173.3 100 82.0
BcaB02g10086 Brassica carinata HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
BcaC02g10868 Brassica carinata HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
A07p18140 Brassica napus HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
C04p24240 Brassica napus HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
BolC4t23922H Brassica oleracea HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
BraA07t29532Z Brassica rapa HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
CAN.G745.9 Capsicum annuum HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 82.0
FAN25G2905 Fragaria x ananassa HOM05D004616 ORTHO05D005860 1.4e-41 172.9 110 78.2
PGSC0003DMG400026348 Solanum tuberosum HOM05D004616 ORTHO05D005860 1.4e-41 172.9 100 81.0
Cfa009990 Carpinus fangiana HOM05D004616 ORTHO05D005860 1.9e-41 172.6 101 82.2
Lj3g0000295 Lotus japonicus HOM05D004616 ORTHO05D005860 2.5e-41 172.2 100 81.0
MD11G1168400 Malus domestica HOM05D004616 ORTHO05D005860 2.5e-41 172.2 100 82.0
MD03G1149500 Malus domestica HOM05D004616 ORTHO05D005860 3.2e-41 171.8 100 81.0
TPR.G4527 Trifolium pratense HOM05D004616 ORTHO05D005860 3.2e-41 171.8 100 81.0
Aa31LG5G8750 Aethionema arabicum HOM05D004616 ORTHO05D005860 7.2e-41 170.6 100 79.0
Medtr2g086780 Medicago truncatula HOM05D004616 ORTHO05D005860 7.2e-41 170.6 100 80.0
Actinidia07256 Actinidia chinensis HOM05D004616 ORTHO05D005860 9.4e-41 170.2 105 80.0
AL4G21290 Arabidopsis lyrata HOM05D004616 ORTHO05D005860 9.4e-41 170.2 100 80.0
AT2G27350 Arabidopsis thaliana HOM05D004616 ORTHO05D005860 9.4e-41 170.2 100 80.0
CSS0010321 Camellia sinensis var. sinensis HOM05D004616 ORTHO05D005860 9.4e-41 170.2 100 81.0
DCAR_012213 Daucus carota HOM05D004616 ORTHO05D005860 9.4e-41 170.2 100 80.0
Hund20933 Selenicereus undatus HOM05D004616 ORTHO05D005860 9.4e-41 170.2 100 80.0
unitig_899.g14957 Utricularia gibba HOM05D004616 ORTHO05D005860 9.4e-41 170.2 100 80.0
Sp4g10140 Schrenkiella parvula HOM05D004616 ORTHO05D005860 1.2e-40 169.9 100 81.0
BcaB06g28144 Brassica carinata HOM05D004616 ORTHO05D005860 1.6e-40 169.5 100 80.0
A04p20900 Brassica napus HOM05D004616 ORTHO05D005860 1.6e-40 169.5 100 80.0
C04p56710 Brassica napus HOM05D004616 ORTHO05D005860 1.6e-40 169.5 100 80.0
BolC4t27203H Brassica oleracea HOM05D004616 ORTHO05D005860 1.6e-40 169.5 100 80.0
BraA04t17661Z Brassica rapa HOM05D004616 ORTHO05D005860 1.6e-40 169.5 100 80.0
THA.LOC104826435 Tarenaya hassleriana HOM05D004616 ORTHO05D005860 1.6e-40 169.5 100 80.0
Ca_01648_v3 Cicer arietinum L. HOM05D004616 ORTHO05D005860 2.1e-40 169.1 100 80.0
MELO3C004671.2 Cucumis melo HOM05D004616 ORTHO05D005860 3.6e-40 168.3 100 80.0
CsaV3_1G015050 Cucumis sativus L. HOM05D004616 ORTHO05D005860 3.6e-40 168.3 100 80.0
Thhalv10001965m.g Eutrema salsugineum HOM05D004616 ORTHO05D005860 3.6e-40 168.3 100 79.0
Os04g0414100 Oryza sativa ssp. japonica HOM05D004616 ORTHO05D005860 4.7e-40 167.9 100 79.0
AUR62020259 Chenopodium quinoa HOM05D004616 ORTHO05D005860 6.1e-40 167.5 99 78.8
Lalb_Chr01g0004921 Lupinus albus HOM05D004616 ORTHO05D005860 6.1e-40 167.5 100 80.0
ATR0820G275 Amborella trichopoda HOM05D004616 ORTHO05D005860 7.9e-40 167.2 100 78.0
CSS0027671 Camellia sinensis var. sinensis HOM05D004616 ORTHO05D005860 7.9e-40 167.2 97 82.5
Carub.0004s0797 Capsella rubella HOM05D004616 ORTHO05D005860 7.9e-40 167.2 100 77.0
Potri.004G196800 Populus trichocarpa HOM05D004616 ORTHO05D005860 7.9e-40 167.2 100 82.0
Rhsim13G0113400 Rhododendron simsii HOM05D004616 ORTHO05D005860 1.4e-39 166.4 105 78.1
Nitab4.5_0000937g0090 Nicotiana tabacum HOM05D004616 ORTHO05D005860 1.8e-39 166.0 112 74.1
HPP92_001102 Vanilla planifolia HOM05D004616 ORTHO05D005860 1.8e-39 166.0 100 78.0
Zm00001eb083750 Zea mays HOM05D004616 ORTHO05D005860 2.3e-39 165.6 98 80.6
Eucgr.B03827 Eucalyptus grandis HOM05D004616 ORTHO05D005860 3.0e-39 165.2 98 79.6
BcaC02g08247 Brassica carinata HOM05D004616 ORTHO05D005860 3.9e-39 164.9 96 81.2
Nitab4.5_0005472g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 3.9e-39 164.9 111 74.8
arahy.Tifrunner.gnm1.ann1.TN2AAQ Arachis hypogaea HOM05D004616 ORTHO05D005860 5.1e-39 164.5 100 78.0
arahy.Tifrunner.gnm1.ann1.38CPMH Arachis hypogaea HOM05D004616 ORTHO05D005860 1.1e-38 163.3 100 77.0
Psat5g257760 Pisum sativum HOM05D004616 ORTHO05D005860 2.0e-38 162.5 100 76.0
Sabra04G0133400 Salix brachista HOM05D004616 ORTHO05D005860 3.3e-38 161.8 100 80.0
SEGI_03435 Sequoiadendron giganteum HOM05D004616 ORTHO05D005860 4.4e-38 161.4 100 74.0
TAR623G1480 Trochodendron aralioides HOM05D004616 ORTHO05D005860 4.4e-38 161.4 98 80.6
Zm00001eb421980 Zea mays HOM05D004616 ORTHO05D005860 4.4e-38 161.4 102 77.5
PGR102G3030 Punica granatum HOM05D004616 ORTHO05D005860 3.7e-37 158.3 100 76.0
SMO361G0078 Selaginella moellendorffii HOM05D004616 ORTHO05D005860 1.2e-35 153.3 100 72.0
Mapoly0015s0108 Marchantia polymorpha HOM05D004616 ORTHO05D005860 2.6e-35 152.1 100 69.0
Pp3c7_5530 Physcomitrium patens HOM05D004616 ORTHO05D005860 3.5e-35 151.8 100 69.0
Psat5g173040 Pisum sativum HOM05D004616 ORTHO05D005860 1.9e-33 146.0 96 70.8
Nitab4.5_0008177g0040 Nicotiana tabacum HOM05D004616 ORTHO05D005860 4.8e-29 131.3 73 83.6
AUR62001524 Chenopodium quinoa HOM05D004616 ORTHO05D005860 3.5e-27 125.2 74 77.0
Peaxi162Scf00091g00076 Petunia axillaris HOM05D004616 ORTHO05D005860 1.7e-26 122.9 102 59.8
Ciclev10018416m.g Citrus clementina HOM05D004616 ORTHO05D005860 4.0e-23 111.7 60 81.7
Gorai.001G123000 Gossypium raimondii HOM05D004616 ORTHO05D005860 1.3e-18 96.7 56 82.1
vmacro03327 Vaccinium macrocarpon HOM05D004616 ORTHO05D005860 2.3e-15 85.9 47 85.1
FAN25G2333 Fragaria x ananassa HOM05D004616 ORTHO05D005860 9.8e-06 53.9 32 78.1


User provided reference genes

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