Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib170G0010 Durio zibethinus HOM05D005381 ORTHO05D006674 1.5e-92 342.8 169 100.0
Thecc.09G339700 Theobroma cacao HOM05D005381 ORTHO05D006674 8.3e-35 151.0 82 89.0
Gohir.A03G034400 Gossypium hirsutum HOM05D005381 ORTHO05D006674 2.4e-34 149.4 82 87.8
COL.COLO4_18342 Corchorus olitorius HOM05D005381 ORTHO05D006674 5.4e-34 148.3 82 87.8
Duzib168G0972 Durio zibethinus HOM05D005381 ORTHO05D006674 5.4e-34 148.3 82 89.0
Gohir.D03G133900 Gossypium hirsutum HOM05D005381 ORTHO05D006674 9.2e-34 147.5 134 61.9
Gorai.003G141000 Gossypium raimondii HOM05D005381 ORTHO05D006674 9.2e-34 147.5 134 61.9
Haze_23841 Corylus avellana HOM05D005381 ORTHO05D006674 7.8e-33 144.4 82 84.1
VMungo1127G2043 Vigna mungo HOM05D005381 ORTHO05D006674 1.7e-32 143.3 82 82.9
Manes.04G021900 Manihot esculenta HOM05D005381 ORTHO05D006674 3.9e-32 142.1 82 82.9
Phvul.011G078600 Phaseolus vulgaris HOM05D005381 ORTHO05D006674 5.0e-32 141.7 82 82.9
Eucgr.J00934 Eucalyptus grandis HOM05D005381 ORTHO05D006674 6.6e-32 141.4 129 60.5
Glyma.12G068100 Glycine max HOM05D005381 ORTHO05D006674 8.6e-32 141.0 82 81.7
Glyma.11G147200 Glycine max HOM05D005381 ORTHO05D006674 1.1e-31 140.6 82 81.7
TPR.G15543 Trifolium pratense HOM05D005381 ORTHO05D006674 1.9e-31 139.8 82 80.5
MELO3C025769.2 Cucumis melo HOM05D005381 ORTHO05D006674 2.5e-31 139.4 82 80.5
Lalb_Chr01g0004271 Lupinus albus HOM05D005381 ORTHO05D006674 2.5e-31 139.4 82 80.5
Psat7g224200 Pisum sativum HOM05D005381 ORTHO05D006674 2.5e-31 139.4 82 79.3
THA.LOC104800610 Tarenaya hassleriana HOM05D005381 ORTHO05D006674 2.5e-31 139.4 82 81.7
Cpa.g.sc898.4 Carica papaya HOM05D005381 ORTHO05D006674 3.3e-31 139.0 81 84.0
GSVIVG01025178001 Vitis vinifera HOM05D005381 ORTHO05D006674 3.3e-31 139.0 82 82.9
Atru.chr3.3638 Acer truncatum HOM05D005381 ORTHO05D006674 4.3e-31 138.7 82 82.9
CiPaw.14G080100 Carya illinoinensis HOM05D005381 ORTHO05D006674 4.3e-31 138.7 82 80.5
ClCG02G021120 Citrullus lanatus HOM05D005381 ORTHO05D006674 4.3e-31 138.7 82 80.5
Ca_05253_v3 Cicer arietinum L. HOM05D005381 ORTHO05D006674 5.6e-31 138.3 82 79.3
QL01p022359 Quercus lobata HOM05D005381 ORTHO05D006674 5.6e-31 138.3 82 80.5
Rhsim13G0093900 Rhododendron simsii HOM05D005381 ORTHO05D006674 5.6e-31 138.3 82 81.7
Migut.D02217 Erythranthe guttata HOM05D005381 ORTHO05D006674 7.3e-31 137.9 83 80.7
Lsat_1_v5_gn_6_46081 Lactuca sativa HOM05D005381 ORTHO05D006674 7.3e-31 137.9 82 80.5
CsaV3_6G013880 Cucumis sativus L. HOM05D005381 ORTHO05D006674 9.5e-31 137.5 82 79.3
Dinv32755 Davidia involucrata HOM05D005381 ORTHO05D006674 9.5e-31 137.5 82 80.5
arahy.Tifrunner.gnm1.ann1.7B6ACI Arachis hypogaea HOM05D005381 ORTHO05D006674 1.6e-30 136.7 82 80.5
arahy.Tifrunner.gnm1.ann1.I533MD Arachis hypogaea HOM05D005381 ORTHO05D006674 1.6e-30 136.7 82 80.5
Medtr4g059550 Medicago truncatula HOM05D005381 ORTHO05D006674 1.6e-30 136.7 81 80.2
Ciclev10027798m.g Citrus clementina HOM05D005381 ORTHO05D006674 2.1e-30 136.3 82 81.7
DCAR_018815 Daucus carota HOM05D005381 ORTHO05D006674 2.1e-30 136.3 82 80.5
MBI10_g13354_MAGBIO Magnolia biondii HOM05D005381 ORTHO05D006674 6.1e-30 134.8 83 81.9
SalBow3G2811 Salvia bowleyana HOM05D005381 ORTHO05D006674 6.1e-30 134.8 83 80.7
Lj3g0020359 Lotus japonicus HOM05D005381 ORTHO05D006674 8.0e-30 134.4 82 79.3
Peaxi162Scf00270g00915 Petunia axillaris HOM05D005381 ORTHO05D006674 1.0e-29 134.0 82 80.5
Lj2A1029T35 Lonicera japonica HOM05D005381 ORTHO05D006674 1.4e-29 133.7 82 81.7
Nitab4.5_0000650g0150 Nicotiana tabacum HOM05D005381 ORTHO05D006674 3.1e-29 132.5 82 78.0
vmacro03193 Vaccinium macrocarpon HOM05D005381 ORTHO05D006674 3.1e-29 132.5 83 78.3
Hma1.2p1_1031F.1_g249980 Hydrangea macrophylla HOM05D005381 ORTHO05D006674 4.0e-29 132.1 82 76.8
Nn2g10776 Nelumbo nucifera HOM05D005381 ORTHO05D006674 5.2e-29 131.7 82 79.3
Nitab4.5_0003701g0010 Nicotiana tabacum HOM05D005381 ORTHO05D006674 6.8e-29 131.3 83 78.3
Prupe.6G100600 Prunus persica HOM05D005381 ORTHO05D006674 6.8e-29 131.3 82 80.5
Aa31LG5G7770 Aethionema arabicum HOM05D005381 ORTHO05D006674 8.9e-29 131.0 82 78.0
FvH4_3g32530 Fragaria vesca HOM05D005381 ORTHO05D006674 8.9e-29 131.0 82 79.3
FAN11G2629 Fragaria x ananassa HOM05D005381 ORTHO05D006674 8.9e-29 131.0 82 79.3
FAN21G0488 Fragaria x ananassa HOM05D005381 ORTHO05D006674 8.9e-29 131.0 82 79.3
Actinidia07132 Actinidia chinensis HOM05D005381 ORTHO05D006674 1.2e-28 130.6 80 78.8
CANSAT54G1801 Cannabis sativa HOM05D005381 ORTHO05D006674 1.2e-28 130.6 82 78.0
CSS0008106 Camellia sinensis var. sinensis HOM05D005381 ORTHO05D006674 1.5e-28 130.2 82 76.8
CSS0041314 Camellia sinensis var. sinensis HOM05D005381 ORTHO05D006674 1.5e-28 130.2 82 76.8
Sabra09G0008300 Salix brachista HOM05D005381 ORTHO05D006674 1.5e-28 130.2 82 78.0
Lalb_Chr19g0137331 Lupinus albus HOM05D005381 ORTHO05D006674 2.0e-28 129.8 82 74.4
TAR636G1890 Trochodendron aralioides HOM05D005381 ORTHO05D006674 2.0e-28 129.8 82 78.0
Oeu002863.1 Olea europaea HOM05D005381 ORTHO05D006674 4.4e-28 128.6 83 78.3
HanXRQChr13g0403491 Helianthus annuus HOM05D005381 ORTHO05D006674 5.8e-28 128.3 82 75.6
Potri.009G013000 Populus trichocarpa HOM05D005381 ORTHO05D006674 7.5e-28 127.9 82 78.0
Aqoxy1G01625 Aquilegia oxysepala HOM05D005381 ORTHO05D006674 9.8e-28 127.5 83 77.1
Aqoxy5G04136 Aquilegia oxysepala HOM05D005381 ORTHO05D006674 9.8e-28 127.5 83 77.1
Cc01_g11200 Coffea canephora HOM05D005381 ORTHO05D006674 9.8e-28 127.5 83 77.1
RcHm_v2.0_Chr5g0059591 Rosa chinensis HOM05D005381 ORTHO05D006674 9.8e-28 127.5 82 76.8
SGA_v2.0_scaffold97G29223 Striga asiatica HOM05D005381 ORTHO05D006674 1.3e-27 127.1 82 75.6
FAN25G3738 Fragaria x ananassa HOM05D005381 ORTHO05D006674 1.7e-27 126.7 82 78.0
Solyc11g069340.2 Solanum lycopersicum HOM05D005381 ORTHO05D006674 1.7e-27 126.7 83 75.9
Sopen11g028060 Solanum pennellii HOM05D005381 ORTHO05D006674 1.7e-27 126.7 83 75.9
MD03G1116700 Malus domestica HOM05D005381 ORTHO05D006674 2.9e-27 125.9 82 75.6
ATR0115G037 Amborella trichopoda HOM05D005381 ORTHO05D006674 3.7e-27 125.6 82 75.6
MD11G1134700 Malus domestica HOM05D005381 ORTHO05D006674 3.7e-27 125.6 82 74.4
AUR62024992 Chenopodium quinoa HOM05D005381 ORTHO05D006674 8.3e-27 124.4 82 75.6
ECA233G6150 Erigeron canadensis HOM05D005381 ORTHO05D006674 8.3e-27 124.4 82 73.2
CAN.G631.20 Capsicum annuum HOM05D005381 ORTHO05D006674 1.1e-26 124.0 83 73.5
AUR62039627 Chenopodium quinoa HOM05D005381 ORTHO05D006674 1.4e-26 123.6 82 75.6
unitig_899.g14913 Utricularia gibba HOM05D005381 ORTHO05D006674 1.4e-26 123.6 87 72.4
PSO339G1100 Papaver somniferum HOM05D005381 ORTHO05D006674 1.9e-26 123.2 83 72.3
EL10Ac9g22502 Beta vulgaris HOM05D005381 ORTHO05D006674 2.4e-26 122.9 82 74.4
HPP92_012655 Vanilla planifolia HOM05D005381 ORTHO05D006674 3.2e-26 122.5 82 74.4
Hund08141 Selenicereus undatus HOM05D005381 ORTHO05D006674 5.4e-26 121.7 81 74.1
PSO063G6738 Papaver somniferum HOM05D005381 ORTHO05D006674 7.0e-26 121.3 82 72.0
TAR636G1844 Trochodendron aralioides HOM05D005381 ORTHO05D006674 1.6e-25 120.2 77 75.3
PGR119G0002 Punica granatum HOM05D005381 ORTHO05D006674 2.0e-25 119.8 82 70.7
CDE02G3164 Ceratophyllum demersum HOM05D005381 ORTHO05D006674 7.8e-25 117.9 82 73.2
Sed0021600 Sechium edule HOM05D005381 ORTHO05D006674 7.8e-25 117.9 82 70.7
CDE08G1578 Ceratophyllum demersum HOM05D005381 ORTHO05D006674 1.0e-24 117.5 82 73.2
Zm00001eb089580 Zea mays HOM05D005381 ORTHO05D006674 2.3e-24 116.3 82 72.0
AT2G28450 Arabidopsis thaliana HOM05D005381 ORTHO05D006674 3.9e-24 115.5 83 69.9
AL4G21570 Arabidopsis lyrata HOM05D005381 ORTHO05D006674 6.6e-24 114.8 82 69.5
SEGI_24136 Sequoiadendron giganteum HOM05D005381 ORTHO05D006674 8.6e-24 114.4 82 69.5
CARHR121390 Cardamine hirsuta HOM05D005381 ORTHO05D006674 1.9e-23 113.2 82 69.5
Carub.0004s0939 Capsella rubella HOM05D005381 ORTHO05D006674 3.3e-23 112.5 81 70.4
Thhalv10016347m.g Eutrema salsugineum HOM05D005381 ORTHO05D006674 5.6e-23 111.7 82 68.3
A07p19020 Brassica napus HOM05D005381 ORTHO05D006674 2.1e-22 109.8 85 67.1
C04p22930 Brassica napus HOM05D005381 ORTHO05D006674 2.1e-22 109.8 85 67.1
BolC4t23787H Brassica oleracea HOM05D005381 ORTHO05D006674 2.1e-22 109.8 85 67.1
BraA07t29607Z Brassica rapa HOM05D005381 ORTHO05D006674 2.1e-22 109.8 85 67.1
Sp4g11270 Schrenkiella parvula HOM05D005381 ORTHO05D006674 2.8e-22 109.4 85 67.1
Ah.01g002840 Amaranthus hybridus HOM05D005381 ORTHO05D006674 2.2e-19 99.8 76 67.1
Mapoly0078s0012 Marchantia polymorpha HOM05D005381 ORTHO05D006674 1.1e-18 97.4 96 56.2
AagrBONN_evm.TU.Sc2ySwM_228.3233 Anthoceros agrestis HOM05D005381 ORTHO05D006674 7.0e-18 94.7 97 54.6
Pp3c10_16370 Physcomitrium patens HOM05D005381 ORTHO05D006674 2.3e-16 89.7 95 53.7
SMO340G0204 Selaginella moellendorffii HOM05D005381 ORTHO05D006674 5.1e-16 88.6 83 55.4
CBR_g8736 Chara braunii HOM05D005381 ORTHO05D006674 4.3e-15 85.5 88 53.4
Thecc.03G060700 Theobroma cacao HOM05D005381 ORTHO05D006674 1.4e-13 80.5 46 84.8
BcaC01g02792 Brassica carinata HOM05D005381 ORTHO05D006674 2.6e-12 76.3 82 53.7
C03p60310 Brassica napus HOM05D005381 ORTHO05D006674 2.6e-12 76.3 82 53.7
C03p60360 Brassica napus HOM05D005381 ORTHO05D006674 2.6e-12 76.3 82 53.7
C03p60390 Brassica napus HOM05D005381 ORTHO05D006674 2.6e-12 76.3 82 53.7
BolC3t18293H Brassica oleracea HOM05D005381 ORTHO05D006674 2.6e-12 76.3 82 53.7
BolC3t18299H Brassica oleracea HOM05D005381 ORTHO05D006674 2.6e-12 76.3 82 53.7
BcaC01g02790 Brassica carinata HOM05D005381 ORTHO05D006674 3.4e-12 75.9 81 54.3
BolC3t18296H Brassica oleracea HOM05D005381 ORTHO05D006674 6.4e-11 71.6 83 53.0
Cre02.g101950 Chlamydomonas reinhardtii HOM05D005381 ORTHO05D006674 4.3e-07 58.9 94 40.4


User provided reference genes

Program Settings