Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0770 Durio zibethinus HOM05D005531 ORTHO05D006332 2.2e-188 662.1 330 100.0
Thecc.04G166800 Theobroma cacao HOM05D005531 ORTHO05D006332 1.9e-147 526.2 439 65.6
Gohir.A02G090900 Gossypium hirsutum HOM05D005531 ORTHO05D006332 6.4e-140 501.1 440 62.7
Gorai.005G123800 Gossypium raimondii HOM05D005531 ORTHO05D006332 2.3e-137 492.7 439 62.2
Gohir.D02G109600 Gossypium hirsutum HOM05D005531 ORTHO05D006332 8.6e-137 490.7 439 62.4
CiPaw.01G171100 Carya illinoinensis HOM05D005531 ORTHO05D006332 2.7e-114 416.0 439 54.2
GSVIVG01038136001 Vitis vinifera HOM05D005531 ORTHO05D006332 1.7e-113 413.3 439 53.3
Cfa015263 Carpinus fangiana HOM05D005531 ORTHO05D006332 9.6e-112 407.5 440 53.4
Dinv09088 Davidia involucrata HOM05D005531 ORTHO05D006332 2.1e-111 406.4 438 53.7
Manes.04G036700 Manihot esculenta HOM05D005531 ORTHO05D006332 4.9e-108 395.2 443 52.8
TWI15G0620 Tripterygium wilfordii HOM05D005531 ORTHO05D006332 1.1e-107 394.0 436 52.8
Atru.chr4.1396 Acer truncatum HOM05D005531 ORTHO05D006332 7.1e-107 391.3 394 55.6
Eucgr.A00006 Eucalyptus grandis HOM05D005531 ORTHO05D006332 2.8e-103 379.4 441 51.2
CSS0024284 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 8.1e-103 377.9 393 56.5
COL.COLO4_07535 Corchorus olitorius HOM05D005531 ORTHO05D006332 1.1e-102 377.5 344 60.8
Actinidia12100 Actinidia chinensis HOM05D005531 ORTHO05D006332 1.8e-102 376.7 438 51.4
MSTRG.22027 Avicennia marina HOM05D005531 ORTHO05D006332 1.9e-99 366.7 440 49.8
Oeu021570.1 Olea europaea HOM05D005531 ORTHO05D006332 9.3e-99 364.4 440 49.8
Cc01_g03590 Coffea canephora HOM05D005531 ORTHO05D006332 2.3e-97 359.8 456 49.1
FAN18G3014 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.3e-95 354.0 433 48.7
FvH4_5g12060 Fragaria vesca HOM05D005531 ORTHO05D006332 1.6e-95 353.6 433 48.7
FAN08G1892 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.6e-95 353.6 429 49.0
FAN18G3485 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.6e-95 353.6 433 48.7
FAN04G0151 Fragaria x ananassa HOM05D005531 ORTHO05D006332 2.1e-95 353.2 394 51.3
RcHm_v2.0_Chr4g0406021 Rosa chinensis HOM05D005531 ORTHO05D006332 2.8e-95 352.8 436 48.4
PGR042G0031 Punica granatum HOM05D005531 ORTHO05D006332 8.2e-95 351.3 438 49.5
THA.LOC104817577 Tarenaya hassleriana HOM05D005531 ORTHO05D006332 1.1e-94 350.9 443 50.1
Potri.013G125700 Populus trichocarpa HOM05D005531 ORTHO05D006332 1.4e-94 350.5 440 48.9
MD04G1048800 Malus domestica HOM05D005531 ORTHO05D006332 3.1e-94 349.4 439 49.7
FAN13G1713 Fragaria x ananassa HOM05D005531 ORTHO05D006332 9.0e-94 347.8 429 48.3
CAN.G87.3 Capsicum annuum HOM05D005531 ORTHO05D006332 1.2e-93 347.4 439 48.7
Ca_18643_v3 Cicer arietinum L. HOM05D005531 ORTHO05D006332 5.8e-93 345.1 446 47.8
TAR362G0104 Trochodendron aralioides HOM05D005531 ORTHO05D006332 1.0e-92 344.4 266 67.7
Lj4g0014314 Lotus japonicus HOM05D005531 ORTHO05D006332 1.4e-91 340.5 441 49.7
Phvul.003G296200 Phaseolus vulgaris HOM05D005531 ORTHO05D006332 1.4e-91 340.5 420 49.0
arahy.Tifrunner.gnm1.ann1.6AY0JN Arachis hypogaea HOM05D005531 ORTHO05D006332 3.2e-91 339.3 385 52.7
TPR.G23541 Trifolium pratense HOM05D005531 ORTHO05D006332 3.2e-91 339.3 441 47.6
HanXRQChr14g0432131 Helianthus annuus HOM05D005531 ORTHO05D006332 5.5e-91 338.6 441 47.4
Glyma.02G137000 Glycine max HOM05D005531 ORTHO05D006332 9.3e-91 337.8 452 47.3
SGA_v2.0_scaffold25G10999 Striga asiatica HOM05D005531 ORTHO05D006332 3.5e-90 335.9 406 49.0
Aa31LG10G7090 Aethionema arabicum HOM05D005531 ORTHO05D006332 2.3e-89 333.2 370 51.6
AL5G32590 Arabidopsis lyrata HOM05D005531 ORTHO05D006332 3.0e-89 332.8 438 47.5
AT3G52050 Arabidopsis thaliana HOM05D005531 ORTHO05D006332 3.9e-89 332.4 432 47.5
Medtr4g087250 Medicago truncatula HOM05D005531 ORTHO05D006332 3.3e-88 329.3 445 46.3
Lalb_Chr16g0384491 Lupinus albus HOM05D005531 ORTHO05D006332 4.8e-87 325.5 446 45.3
Aqoxy1G02291 Aquilegia oxysepala HOM05D005531 ORTHO05D006332 1.4e-86 323.9 443 45.6
MELO3C033213.2 Cucumis melo HOM05D005531 ORTHO05D006332 2.4e-86 323.2 390 48.5
CsaV3_4G029900 Cucumis sativus L. HOM05D005531 ORTHO05D006332 3.1e-86 322.8 390 49.0
Sp5g10250 Schrenkiella parvula HOM05D005531 ORTHO05D006332 4.1e-86 322.4 430 46.7
Carub.0005s1837 Capsella rubella HOM05D005531 ORTHO05D006332 3.4e-85 319.3 437 46.0
ECA238G0637 Erigeron canadensis HOM05D005531 ORTHO05D006332 4.5e-85 318.9 340 53.8
MBI08_g25563_MAGBIO Magnolia biondii HOM05D005531 ORTHO05D006332 7.7e-85 318.2 392 47.7
Prupe.1G206500 Prunus persica HOM05D005531 ORTHO05D006332 7.7e-85 318.2 413 48.9
Rhsim02G0083700 Rhododendron simsii HOM05D005531 ORTHO05D006332 1.0e-84 317.8 470 45.3
A09p45110 Brassica napus HOM05D005531 ORTHO05D006332 1.7e-84 317.0 433 45.5
C08p27300 Brassica napus HOM05D005531 ORTHO05D006332 2.9e-84 316.2 431 46.4
Nn7g37674 Nelumbo nucifera HOM05D005531 ORTHO05D006332 4.2e-83 312.4 439 46.2
Sed0016017 Sechium edule HOM05D005531 ORTHO05D006332 5.5e-83 312.0 395 49.1
DCAR_028442 Daucus carota HOM05D005531 ORTHO05D006332 1.2e-82 310.8 376 49.7
Migut.N03071 Erythranthe guttata HOM05D005531 ORTHO05D006332 2.7e-82 309.7 417 45.6
Psat7g121280 Pisum sativum HOM05D005531 ORTHO05D006332 1.0e-81 307.8 443 44.7
Hund12388 Selenicereus undatus HOM05D005531 ORTHO05D006332 1.0e-81 307.8 375 50.7
BcaNung06967 Brassica carinata HOM05D005531 ORTHO05D006332 1.4e-81 307.4 340 51.2
CANSAT54G2817 Cannabis sativa HOM05D005531 ORTHO05D006332 1.8e-81 307.0 403 47.1
Glyma.07G208400 Glycine max HOM05D005531 ORTHO05D006332 2.3e-81 306.6 446 45.5
SalBow6G4103 Salvia bowleyana HOM05D005531 ORTHO05D006332 2.3e-81 306.6 553 40.0
BraA09t39972Z Brassica rapa HOM05D005531 ORTHO05D006332 3.9e-81 305.8 436 45.6
arahy.Tifrunner.gnm1.ann1.77ZG52 Arachis hypogaea HOM05D005531 ORTHO05D006332 5.1e-81 305.4 327 54.1
BolC8t50347H Brassica oleracea HOM05D005531 ORTHO05D006332 2.0e-80 303.5 441 45.1
Thhalv10010410m.g Eutrema salsugineum HOM05D005531 ORTHO05D006332 2.5e-80 303.1 434 44.0
Lsat_1_v5_gn_2_38340 Lactuca sativa HOM05D005531 ORTHO05D006332 1.3e-79 300.8 332 52.7
BcaB01g00451 Brassica carinata HOM05D005531 ORTHO05D006332 2.4e-78 296.6 327 51.1
CSS0025079 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 3.1e-78 296.2 165 87.9
CDE07G1035 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 7.7e-77 291.6 337 48.1
Os03g0227300 Oryza sativa ssp. japonica HOM05D005531 ORTHO05D006332 1.0e-76 291.2 344 48.5
Sopen03g015200 Solanum pennellii HOM05D005531 ORTHO05D006332 1.3e-76 290.8 260 59.6
HPP92_024943 Vanilla planifolia HOM05D005531 ORTHO05D006332 1.6e-74 283.9 363 45.5
PSO675G8407 Papaver somniferum HOM05D005531 ORTHO05D006332 7.4e-72 275.0 439 41.5
Sabra13G0104500 Salix brachista HOM05D005531 ORTHO05D006332 3.8e-68 262.7 586 35.2
ATR0743G039 Amborella trichopoda HOM05D005531 ORTHO05D006332 2.5e-67 260.0 363 43.8
HPP92_024926 Vanilla planifolia HOM05D005531 ORTHO05D006332 2.1e-66 256.9 325 46.5
PSO017G5810 Papaver somniferum HOM05D005531 ORTHO05D006332 5.2e-65 252.3 374 42.8
SEGI_01886 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 5.3e-62 242.3 330 44.2
Ciclev10021434m.g Citrus clementina HOM05D005531 ORTHO05D006332 4.2e-59 232.6 264 51.1
Oeu016608.2 Olea europaea HOM05D005531 ORTHO05D006332 4.0e-57 226.1 269 49.8
EL10Ac3g06068 Beta vulgaris HOM05D005531 ORTHO05D006332 5.2e-57 225.7 315 46.7
PSO675G6185 Papaver somniferum HOM05D005531 ORTHO05D006332 9.1e-54 214.9 424 38.0
Zm00001eb399280 Zea mays HOM05D005531 ORTHO05D006332 7.2e-51 205.3 288 43.4
QL10p054586 Quercus lobata HOM05D005531 ORTHO05D006332 1.6e-50 204.1 244 50.4
QL93p1902_0778 Quercus lobata HOM05D005531 ORTHO05D006332 1.6e-50 204.1 244 50.4
unitig_0.g2525 Utricularia gibba HOM05D005531 ORTHO05D006332 9.8e-48 194.9 326 41.4
PSO017G4245 Papaver somniferum HOM05D005531 ORTHO05D006332 2.1e-42 177.2 261 42.5
QL93p1902_0765 Quercus lobata HOM05D005531 ORTHO05D006332 2.8e-42 176.8 171 57.3
SMO232G0046 Selaginella moellendorffii HOM05D005531 ORTHO05D006332 4.0e-41 172.9 165 50.9
QL10p054599 Quercus lobata HOM05D005531 ORTHO05D006332 8.9e-41 171.8 172 57.0
AUR62002375 Chenopodium quinoa HOM05D005531 ORTHO05D006332 8.3e-39 165.2 238 43.7
AUR62023806 Chenopodium quinoa HOM05D005531 ORTHO05D006332 8.3e-39 165.2 243 43.2
Cpa.g.sc9.359 Carica papaya HOM05D005531 ORTHO05D006332 1.8e-38 164.1 168 56.0
Pp3c16_17520 Physcomitrium patens HOM05D005531 ORTHO05D006332 1.1e-35 154.8 343 30.3
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 5.2e-33 146.0 156 48.7
ClCG04G002830 Citrullus lanatus HOM05D005531 ORTHO05D006332 1.5e-32 144.4 125 60.8
BolC7t45193H Brassica oleracea HOM05D005531 ORTHO05D006332 2.6e-32 143.7 102 68.6
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 1.3e-31 141.4 178 44.9
CARHR161680 Cardamine hirsuta HOM05D005531 ORTHO05D006332 4.9e-31 139.4 170 50.0
Peaxi162Scf00568g00522 Petunia axillaris HOM05D005531 ORTHO05D006332 4.1e-30 136.3 167 46.7
Mapoly0001s0155 Marchantia polymorpha HOM05D005531 ORTHO05D006332 3.9e-28 129.8 232 38.4
Sabra13G0105100 Salix brachista HOM05D005531 ORTHO05D006332 3.9e-28 129.8 318 33.0
MD17G1177600 Malus domestica HOM05D005531 ORTHO05D006332 1.5e-27 127.9 80 76.2
C07p46750 Brassica napus HOM05D005531 ORTHO05D006332 3.3e-27 126.7 102 63.7
Cpa.g.sc9.358 Carica papaya HOM05D005531 ORTHO05D006332 5.6e-27 125.9 212 42.0
Haze_01370 Corylus avellana HOM05D005531 ORTHO05D006332 5.6e-27 125.9 70 87.1
VMungo0251G0056 Vigna mungo HOM05D005531 ORTHO05D006332 7.3e-27 125.6 68 89.7
QL10p054560 Quercus lobata HOM05D005531 ORTHO05D006332 1.2e-26 124.8 62 93.5
Ah.14g081000 Amaranthus hybridus HOM05D005531 ORTHO05D006332 4.0e-25 119.8 111 57.7
MD17G1177500 Malus domestica HOM05D005531 ORTHO05D006332 6.8e-25 119.0 97 66.0
HPP92_024946 Vanilla planifolia HOM05D005531 ORTHO05D006332 2.0e-24 117.5 74 75.7
Nitab4.5_0005427g0050 Nicotiana tabacum HOM05D005531 ORTHO05D006332 2.2e-23 114.0 58 91.4
ClCG04G002840 Citrullus lanatus HOM05D005531 ORTHO05D006332 2.4e-22 110.5 65 80.0
Nitab4.5_0005427g0010 Nicotiana tabacum HOM05D005531 ORTHO05D006332 4.1e-22 109.8 62 83.9
Nitab4.5_0014896g0010 Nicotiana tabacum HOM05D005531 ORTHO05D006332 4.1e-22 109.8 62 83.9
VMungo0251G0293 Vigna mungo HOM05D005531 ORTHO05D006332 5.4e-22 109.4 125 51.2
Peaxi162Scf00568g00523 Petunia axillaris HOM05D005531 ORTHO05D006332 9.2e-22 108.6 62 82.3
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-21 107.8 62 82.3
Nitab4.5_0005427g0020 Nicotiana tabacum HOM05D005531 ORTHO05D006332 4.6e-21 106.3 72 79.2
CARHR161690 Cardamine hirsuta HOM05D005531 ORTHO05D006332 1.1e-19 101.7 61 78.7
SalBow1G7787 Salvia bowleyana HOM05D005531 ORTHO05D006332 2.1e-18 97.4 64 76.6
CDE07G1763 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 4.7e-18 96.3 63 66.7
PSO017G1590 Papaver somniferum HOM05D005531 ORTHO05D006332 4.7e-18 96.3 74 62.2
Sabra13G0104800 Salix brachista HOM05D005531 ORTHO05D006332 1.8e-17 94.4 65 72.3
MELO3C033507.2 Cucumis melo HOM05D005531 ORTHO05D006332 4.0e-17 93.2 53 84.9
MCO14G121 Micromonas commoda HOM05D005531 ORTHO05D006332 4.0e-17 93.2 159 34.6
CBR_g41469 Chara braunii HOM05D000019 ORTHO05D009492 1.4e-14 84.7 70 55.7
Haze_01368 Corylus avellana HOM05D005531 ORTHO05D006332 1.7e-12 77.8 99 46.5
SEGI_24465 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 2.3e-12 77.4 60 61.7
Sabra13G0104900 Salix brachista HOM05D001493 ORTHO05D006332 1.6e-10 71.2 51 70.6
Solyc03g062930.3 Solanum lycopersicum HOM05D005531 ORTHO05D006332 6.2e-10 69.3 37 89.2
PRCOL_00004663 Prasinoderma coloniale HOM05D005531 ORTHO05D006332 6.8e-09 65.9 218 28.0
SHI30281 Sapria himalayana HOM05D005531 ORTHO05D006332 2.4e-06 57.4 112 37.5


User provided reference genes

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