Gene: Sopen03g015200

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g015200
  • Transcript Identifier Sopen03g015200.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 30812984-30835761 : positive

Gene Family Information

  • ID HOM05D005531
  • #Genes/#Species 139/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g015200.1

Descriptions

  • Description 5-3 exonuclease family protein | FUNCTIONS IN: 5-3 exonuclease activity, DNA binding, catalytic activity | CONTAINS InterPro DOMAIN/s: 5-3 exonuclease, SAM-fold domain , 5-3 exonuclease, C-terminal subdomain , 5-3 exonuclease, N-terminal , 5-3 exonuclease, N-terminal resolvase-like domain , Helix-hairpin-helix motif, class 2 | BEST Arabidopsis thaliana protein match is: 5-3 exonuclease family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006261
IEA
InterProDNA-dependent DNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003677
IEA
InterProDNA binding
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D005531

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029060 PIN-like domain superfamily
IPR002298 DNA polymerase A
IPR002421 5'-3' exonuclease
IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal
Mapman id Description
13.5.6.2 Cell cycle organisation.organellar DNA replication.RNA primer removal.mitochondrial RNA exonuclease