Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1477 Durio zibethinus HOM05D002170 ORTHO05D007478 3.5e-247 857.8 427 100.0
Duzib084G0411 Durio zibethinus HOM05D002170 ORTHO05D007478 3.6e-228 794.7 427 93.2
Thecc.03G062200 Theobroma cacao HOM05D002170 ORTHO05D007478 3.6e-228 794.7 427 91.8
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 3.3e-221 771.5 431 90.5
Gohir.A09G175200 Gossypium hirsutum HOM05D002170 ORTHO05D007478 1.6e-220 769.2 427 89.5
Gorai.006G191200 Gossypium raimondii HOM05D002170 ORTHO05D007478 1.6e-220 769.2 427 89.5
Gohir.D09G169700 Gossypium hirsutum HOM05D002170 ORTHO05D007478 5.2e-219 764.2 427 89.0
CANSAT35G0706 Cannabis sativa HOM05D002170 ORTHO05D007478 6.2e-212 740.7 427 85.9
Cpa.g.sc3.360 Carica papaya HOM05D002170 ORTHO05D007478 1.8e-211 739.2 426 85.9
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 5.2e-211 737.6 429 86.5
MD14G1239300 Malus domestica HOM05D002170 ORTHO05D007478 6.8e-211 737.3 427 84.5
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 2.0e-210 735.7 428 85.3
Haze_18913 Corylus avellana HOM05D002170 ORTHO05D007478 3.4e-210 734.9 428 86.0
Prupe.5G236800 Prunus persica HOM05D002170 ORTHO05D007478 7.6e-210 733.8 429 85.1
Ciclev10020301m.g Citrus clementina HOM05D002170 ORTHO05D007478 1.3e-209 733.0 428 86.2
Medtr6g071210 Medicago truncatula HOM05D002170 ORTHO05D007478 2.2e-209 732.3 424 86.3
Cfa020634 Carpinus fangiana HOM05D002170 ORTHO05D007478 6.4e-209 730.7 429 85.8
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 1.4e-208 729.6 428 85.3
Eucgr.K02286 Eucalyptus grandis HOM05D002170 ORTHO05D007478 2.4e-208 728.8 427 84.3
Lj2g0009559 Lotus japonicus HOM05D002170 ORTHO05D007478 2.4e-208 728.8 428 85.5
Glyma.07G105400 Glycine max HOM05D002170 ORTHO05D007478 4.1e-208 728.0 396 89.6
TAR629G0118 Trochodendron aralioides HOM05D002170 ORTHO05D007478 4.1e-208 728.0 427 83.8
TPR.G22320 Trifolium pratense HOM05D002170 ORTHO05D007478 7.1e-208 727.2 429 84.8
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 3.5e-207 724.9 428 84.8
CsaV3_1G007330 Cucumis sativus L. HOM05D002170 ORTHO05D007478 6.0e-207 724.2 428 84.6
Glyma.09G172700 Glycine max HOM05D002170 ORTHO05D007478 7.8e-207 723.8 428 84.6
MD06G1232500 Malus domestica HOM05D002170 ORTHO05D007478 7.8e-207 723.8 427 83.4
RcHm_v2.0_Chr7g0177971 Rosa chinensis HOM05D002170 ORTHO05D007478 1.0e-206 723.4 430 84.7
Sc04g0004500 Simmondsia chinensis HOM05D002170 ORTHO05D007478 1.0e-206 723.4 402 88.6
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 1.0e-206 723.4 428 83.6
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 1.7e-206 722.6 429 83.9
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 2.3e-206 722.2 430 85.1
Ca_25357_v3 Cicer arietinum L. HOM05D002170 ORTHO05D007478 3.9e-206 721.5 430 84.0
Sed0008892 Sechium edule HOM05D002170 ORTHO05D007478 3.9e-206 721.5 429 84.6
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 5.1e-206 721.1 431 84.0
CSS0009402 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 6.6e-206 720.7 393 89.6
CSS0042449 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 6.6e-206 720.7 393 89.6
Hma1.2p1_0471F.1_g159440 Hydrangea macrophylla HOM05D002170 ORTHO05D007478 6.6e-206 720.7 435 83.2
Phvul.004G148000 Phaseolus vulgaris HOM05D002170 ORTHO05D007478 6.6e-206 720.7 428 84.3
arahy.Tifrunner.gnm1.ann1.DTQ5EB Arachis hypogaea HOM05D002170 ORTHO05D007478 1.5e-205 719.5 432 83.1
Manes.06G002900 Manihot esculenta HOM05D002170 ORTHO05D007478 1.9e-205 719.2 428 84.6
Potri.015G030600 Populus trichocarpa HOM05D002170 ORTHO05D007478 1.9e-205 719.2 430 84.9
Lalb_Chr14g0370711 Lupinus albus HOM05D002170 ORTHO05D007478 2.5e-205 718.8 399 88.7
FvH4_5g17680 Fragaria vesca HOM05D002170 ORTHO05D007478 3.3e-205 718.4 432 82.9
CDE06G2490 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 4.3e-205 718.0 419 83.1
FAN18G3495 Fragaria x ananassa HOM05D002170 ORTHO05D007478 4.3e-205 718.0 432 82.6
Rhsim08G0127800 Rhododendron simsii HOM05D002170 ORTHO05D007478 7.3e-205 717.2 431 82.6
arahy.Tifrunner.gnm1.ann1.U6RNCV Arachis hypogaea HOM05D002170 ORTHO05D007478 2.8e-204 715.3 432 82.9
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 1.1e-203 713.4 398 89.2
vmacro17769 Vaccinium macrocarpon HOM05D002170 ORTHO05D007478 1.4e-203 713.0 433 82.4
Migut.D01219 Erythranthe guttata HOM05D002170 ORTHO05D007478 1.8e-203 712.6 429 83.9
FAN08G0558 Fragaria x ananassa HOM05D002170 ORTHO05D007478 1.8e-203 712.6 432 82.4
FAN04G0031 Fragaria x ananassa HOM05D002170 ORTHO05D007478 3.1e-203 711.8 432 81.9
MSTRG.9351 Avicennia marina HOM05D002170 ORTHO05D007478 2.0e-202 709.1 428 82.9
Lj9C416G6 Lonicera japonica HOM05D002170 ORTHO05D007478 2.0e-202 709.1 415 84.3
PSO339G1858 Papaver somniferum HOM05D002170 ORTHO05D007478 4.4e-202 708.0 427 81.3
PSO384G2182 Papaver somniferum HOM05D002170 ORTHO05D007478 4.4e-202 708.0 427 81.3
Atru.BG.197.p Acer truncatum HOM05D002170 ORTHO05D007478 1.3e-201 706.4 379 91.8
Actinidia09052 Actinidia chinensis HOM05D002170 ORTHO05D007478 1.3e-201 706.4 429 83.2
Ah.16g108010 Amaranthus hybridus HOM05D002170 ORTHO05D007478 1.3e-201 706.4 398 88.7
Oeu023513.1 Olea europaea HOM05D002170 ORTHO05D007478 8.4e-201 703.7 434 82.9
THA.LOC104820334 Tarenaya hassleriana HOM05D002170 ORTHO05D007478 4.2e-200 701.4 401 85.5
SalBow5G3655 Salvia bowleyana HOM05D002170 ORTHO05D007478 1.2e-199 699.9 411 84.2
Cc04_g09360 Coffea canephora HOM05D002170 ORTHO05D007478 1.6e-199 699.5 432 80.6
Sopen03g028630 Solanum pennellii HOM05D002170 ORTHO05D007478 2.1e-199 699.1 431 81.2
ECA232G0406 Erigeron canadensis HOM05D002170 ORTHO05D007478 3.5e-199 698.4 396 86.9
Aqoxy3G04073 Aquilegia oxysepala HOM05D002170 ORTHO05D007478 4.6e-199 698.0 431 80.5
Solyc03g097910.4 Solanum lycopersicum HOM05D002170 ORTHO05D007478 4.6e-199 698.0 431 81.2
PGSC0003DMG400033683 Solanum tuberosum HOM05D002170 ORTHO05D007478 4.6e-199 698.0 431 81.4
Hund22449 Selenicereus undatus HOM05D002170 ORTHO05D007478 1.3e-198 696.4 401 85.8
HanXRQChr16g0511571 Helianthus annuus HOM05D002170 ORTHO05D007478 3.3e-197 691.8 396 85.9
GSVIVG01008478001 Vitis vinifera HOM05D002170 ORTHO05D007478 3.3e-197 691.8 368 92.1
CAN.G637.44 Capsicum annuum HOM05D002170 ORTHO05D007478 4.3e-197 691.4 396 86.4
HanXRQChr15g0492101 Helianthus annuus HOM05D002170 ORTHO05D007478 4.3e-197 691.4 396 86.9
AUR62041617 Chenopodium quinoa HOM05D002170 ORTHO05D007478 9.6e-197 690.3 397 86.4
Carub.0003s1752 Capsella rubella HOM05D002170 ORTHO05D007478 1.3e-196 689.9 432 79.4
CiPaw.15G147300 Carya illinoinensis HOM05D002170 ORTHO05D007478 2.8e-196 688.7 368 91.6
C05p48530 Brassica napus HOM05D002170 ORTHO05D007478 3.6e-196 688.3 434 79.3
CARHR093160 Cardamine hirsuta HOM05D002170 ORTHO05D007478 6.2e-196 687.6 401 83.0
BolC5t33589H Brassica oleracea HOM05D002170 ORTHO05D007478 1.1e-195 686.8 434 79.0
DCAR_003532 Daucus carota HOM05D002170 ORTHO05D007478 1.4e-195 686.4 392 85.7
A05p32010 Brassica napus HOM05D002170 ORTHO05D007478 1.8e-195 686.0 402 83.6
Sp3g15930 Schrenkiella parvula HOM05D002170 ORTHO05D007478 1.8e-195 686.0 431 79.4
SEGI_10571 Sequoiadendron giganteum HOM05D002170 ORTHO05D007478 5.8e-194 681.0 400 83.0
Thhalv10020777m.g Eutrema salsugineum HOM05D002170 ORTHO05D007478 9.9e-194 680.2 434 78.3
AT3G17810 Arabidopsis thaliana HOM05D002170 ORTHO05D007478 1.3e-193 679.9 431 78.7
AL3G30970 Arabidopsis lyrata HOM05D002170 ORTHO05D007478 1.7e-193 679.5 431 78.7
Peaxi162Scf00171g01030 Petunia axillaris HOM05D002170 ORTHO05D007478 2.2e-193 679.1 428 79.4
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 2.2e-193 679.1 383 86.4
Atru.chr9.1597 Acer truncatum HOM05D002170 ORTHO05D007478 2.9e-193 678.7 397 85.4
Lsat_1_v5_gn_0_10461 Lactuca sativa HOM05D002170 ORTHO05D007478 3.8e-193 678.3 420 80.0
BraA05t22032Z Brassica rapa HOM05D002170 ORTHO05D007478 8.4e-193 677.2 434 78.3
BcaB04g20814 Brassica carinata HOM05D002170 ORTHO05D007478 5.4e-192 674.5 433 78.5
BcaNung05883 Brassica carinata HOM05D002170 ORTHO05D007478 5.4e-192 674.5 435 78.4
BcaB04g18965 Brassica carinata HOM05D002170 ORTHO05D007478 9.3e-192 673.7 430 78.8
A01p36570 Brassica napus HOM05D002170 ORTHO05D007478 1.3e-190 669.8 431 78.4
BcaC09g48741 Brassica carinata HOM05D002170 ORTHO05D007478 1.8e-190 669.5 431 78.2
C01p46400 Brassica napus HOM05D002170 ORTHO05D007478 8.7e-190 667.2 431 78.0
Os02g0736400 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D007478 2.5e-189 665.6 388 84.5
Aa31LG8G4690 Aethionema arabicum HOM05D002170 ORTHO05D007478 9.6e-189 663.7 496 70.6
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 2.8e-188 662.1 388 83.8
BolC1t04600H Brassica oleracea HOM05D002170 ORTHO05D007478 4.8e-188 661.4 431 77.5
BraA01t03721Z Brassica rapa HOM05D002170 ORTHO05D007478 4.8e-188 661.4 440 76.8
ATR0118G019 Amborella trichopoda HOM05D002170 ORTHO05D007478 1.1e-187 660.2 380 84.5
Nitab4.5_0000430g0180 Nicotiana tabacum HOM05D002170 ORTHO05D007478 9.0e-187 657.1 434 77.6
Dinv05998 Davidia involucrata HOM05D002170 ORTHO05D007478 2.2e-185 652.5 381 85.3
Nitab4.5_0006581g0020 Nicotiana tabacum HOM05D002170 ORTHO05D007478 1.4e-184 649.8 433 76.9
AUR62036004 Chenopodium quinoa HOM05D002170 ORTHO05D007478 2.7e-183 645.6 368 86.7
Psat1g029560 Pisum sativum HOM05D002170 ORTHO05D007478 6.2e-180 634.4 373 84.5
AagrBONN_evm.TU.Sc2ySwM_362.1270 Anthoceros agrestis HOM05D002170 ORTHO05D007478 3.4e-178 628.6 403 74.9
Pp3c20_21870 Physcomitrium patens HOM05D002170 ORTHO05D007478 8.4e-177 624.0 379 79.2
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 3.5e-175 618.6 383 77.8
Pp3c23_13670 Physcomitrium patens HOM05D002170 ORTHO05D007478 7.4e-173 610.9 379 77.3
SMO356G0689 Selaginella moellendorffii HOM05D002170 ORTHO05D007478 6.3e-172 607.8 379 77.3
CBR_g39071 Chara braunii HOM05D002170 ORTHO05D007478 1.6e-159 566.6 381 70.1
CDE04G1365 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 3.9e-158 562.0 357 77.3
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 6.7e-158 561.2 308 88.6
SHI19063 Sapria himalayana HOM05D002170 ORTHO05D007478 4.4e-157 558.5 327 82.3
BcaC01g03730 Brassica carinata HOM05D002170 ORTHO05D007478 1.7e-156 556.6 388 72.7
MCO10G163 Micromonas commoda HOM05D002170 ORTHO05D007478 2.4e-155 552.7 378 70.1
PRCOL_00005290 Prasinoderma coloniale HOM05D002170 ORTHO05D007478 2.0e-149 533.1 369 70.5
Cre13.g578750 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D007478 3.5e-146 522.3 378 65.9
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 1.3e-140 503.8 288 85.8
C03p49210 Brassica napus HOM05D002170 ORTHO05D007478 1.6e-127 460.3 442 57.9
BolC3t17203H Brassica oleracea HOM05D002170 ORTHO05D007478 3.6e-127 459.1 299 76.9
Potri.012G043300 Populus trichocarpa HOM05D002170 ORTHO05D007478 2.5e-112 409.8 267 78.7
Oeu016182.1 Olea europaea HOM05D002170 ORTHO05D007478 3.7e-108 396.0 280 73.6
Haze_26546 Corylus avellana HOM05D002170 ORTHO05D007478 6.7e-73 278.9 360 42.2
Haze_27328 Corylus avellana HOM05D002170 ORTHO05D007478 7.4e-72 275.4 336 43.8
SGA_v2.0_scaffold40G15643 Striga asiatica HOM05D002170 ORTHO05D007478 6.4e-68 262.3 157 82.8
SGA_v2.0_scaffold1356G53925 Striga asiatica HOM05D002170 ORTHO05D007478 3.6e-50 203.4 118 83.1
Solyc02g044040.3 Solanum lycopersicum HOM05D002170 ORTHO05D390875 1.4e-46 191.4 113 80.5
Phvul.008G096200 Phaseolus vulgaris HOM05D002170 ORTHO05D023792 6.1e-34 149.4 84 85.7
Psat3g071120 Pisum sativum HOM05D002170 ORTHO05D327785 1.8e-30 137.9 124 60.5
BraA03t13196Z Brassica rapa HOM05D002170 ORTHO05D023792 4.1e-30 136.7 84 78.6
A03p40410 Brassica napus HOM05D002170 ORTHO05D023792 3.5e-29 133.7 84 76.2
unitig_27.g25081 Utricularia gibba HOM05D002170 ORTHO05D007478 4.4e-24 116.7 85 69.4
Ca_22557_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148971 1.3e-23 115.2 57 89.5
MSTRG.4628 Avicennia marina HOM05D002170 ORTHO05D023792 1.1e-22 112.1 79 73.4
MD05G1052900 Malus domestica HOM05D002170 ORTHO05D000222 1.5e-16 91.7 56 80.4
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 4.9e-15 86.7 273 28.6
Ca_03420_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148646 6.1e-10 69.7 40 77.5
BcaB04g18967 Brassica carinata HOM05D002170 ORTHO05D023792 5.7e-08 63.2 66 53.0
BolC3t17202H Brassica oleracea HOM05D000003 ORTHO05D001498 1.4e-06 58.5 75 49.3


User provided reference genes

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