Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 5.9e-152 540.8 269 100.0
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.0e-139 499.2 297 85.2
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.2e-138 495.7 297 84.8
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 1.1e-137 493.4 297 84.8
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 6.4e-122 441.0 299 75.3
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 3.5e-120 435.3 297 75.4
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 8.6e-119 430.6 297 73.4
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 5.2e-116 421.4 296 71.6
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 6.8e-116 421.0 299 73.9
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 3.8e-114 415.2 257 82.1
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 3.8e-114 415.2 299 70.2
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 1.1e-113 413.7 297 72.4
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.2e-113 412.1 299 71.6
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 7.1e-113 411.0 298 71.8
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 7.8e-112 407.5 298 70.5
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.7e-111 406.4 298 71.1
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 4.3e-110 401.7 297 70.4
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 1.2e-109 400.2 296 69.9
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 3.6e-109 398.7 300 68.7
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 6.2e-109 397.9 297 67.7
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 8.1e-109 397.5 301 68.8
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 1.8e-108 396.4 295 69.5
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 3.1e-108 395.6 297 68.7
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 6.9e-108 394.4 290 69.7
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 2.6e-107 392.5 301 68.1
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 3.4e-107 392.1 324 67.9
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 3.4e-107 392.1 301 68.1
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 9.9e-107 390.6 301 67.8
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 9.9e-107 390.6 300 69.7
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 2.2e-106 389.4 301 67.4
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 2.2e-106 389.4 301 67.4
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 3.8e-106 388.7 302 68.5
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 3.8e-106 388.7 302 68.2
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 8.4e-106 387.5 301 67.4
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.1e-105 387.1 312 65.1
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.2e-105 385.6 311 65.9
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 7.1e-105 384.4 300 68.7
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 7.1e-105 384.4 297 68.4
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 9.3e-105 384.0 302 66.2
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 9.3e-105 384.0 299 68.2
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 9.3e-105 384.0 311 65.6
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 9.3e-105 384.0 298 67.1
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 1.2e-104 383.6 303 66.3
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.6e-104 383.3 298 67.4
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 3.5e-104 382.1 302 66.9
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 8.7e-103 377.5 304 64.5
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.9e-102 376.3 332 60.5
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 3.3e-102 375.6 309 63.4
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.3e-101 373.6 302 65.9
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.3e-101 373.6 273 68.5
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 3.6e-101 372.1 300 66.7
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 1.4e-100 370.2 293 64.5
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 4.0e-100 368.6 295 64.7
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 1.2e-99 367.1 298 63.4
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.4e-99 365.5 300 65.3
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 4.5e-99 365.2 296 65.2
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 9.9e-99 364.0 295 63.7
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 3.8e-98 362.1 301 65.8
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.9e-98 361.7 292 62.0
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 1.9e-97 359.8 294 62.2
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.2e-97 359.0 295 64.4
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 3.2e-97 359.0 291 62.5
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 4.2e-97 358.6 299 64.5
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 9.3e-97 357.5 299 64.9
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.2e-96 357.1 294 63.9
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 1.6e-96 356.7 296 64.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 2.7e-96 355.9 294 63.6
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 6.0e-96 354.8 294 62.2
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.0e-95 354.0 294 62.6
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.8e-95 353.2 273 66.7
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 3.0e-95 352.4 291 60.5
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 3.9e-95 352.1 294 62.9
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 5.1e-95 351.7 321 58.9
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 8.7e-95 350.9 297 64.3
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.1e-94 350.5 321 58.9
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.1e-94 350.5 318 59.7
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 2.5e-94 349.4 279 67.0
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 7.4e-94 347.8 212 82.1
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 1.8e-92 343.2 290 63.4
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 3.1e-92 342.4 299 62.5
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.4e-91 339.0 279 64.9
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 6.4e-90 334.7 283 63.6
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.5e-86 322.8 296 59.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 1.1e-84 317.4 305 55.7
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.8e-84 316.6 241 68.0
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 1.1e-81 307.4 279 59.5
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.9e-78 296.6 220 68.2
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 2.5e-78 296.2 291 54.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 1.5e-75 287.0 298 52.7
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 2.0e-75 286.6 305 54.4
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 6.5e-74 281.6 248 60.1
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 9.3e-73 277.7 293 55.3
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 8.7e-71 271.2 241 61.8
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 7.4e-70 268.1 211 64.5
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 3.1e-68 262.7 247 58.7
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 9.1e-68 261.2 221 62.9
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 1.5e-67 260.4 214 64.0
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 2.6e-67 259.6 302 47.7
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 3.8e-66 255.8 243 60.1
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 6.5e-66 255.0 238 59.7
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 6.5e-66 255.0 286 51.7
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.4e-65 253.8 430 40.7
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 1.9e-65 253.4 252 57.1
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 3.0e-63 246.1 297 45.8
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 4.8e-53 212.2 147 73.5
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 8.2e-53 211.5 219 56.2
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.6e-51 207.2 146 74.7
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.3e-50 204.1 237 52.3
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 3.2e-49 199.5 316 39.2
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.6e-48 197.2 149 65.8
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 5.2e-47 192.2 122 71.3
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 5.7e-46 188.7 148 64.9
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.7e-45 187.2 123 71.5
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 2.4e-44 183.3 147 63.3
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 5.3e-44 182.2 204 54.4
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 5.0e-42 175.6 147 61.9
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 4.7e-40 169.1 231 47.6
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 1.6e-35 154.1 85 82.4
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 5.0e-34 149.1 122 68.0
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 1.1e-33 147.9 85 72.9
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 9.8e-30 134.8 155 51.0
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.9e-25 120.6 67 83.6
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 2.8e-24 116.7 138 42.0
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 5.4e-20 102.4 67 68.7
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 4.6e-19 99.4 254 29.9
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 5.0e-18 95.9 92 56.5
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 1.1e-17 94.7 105 53.3
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 1.1e-15 88.2 138 37.0
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.2e-14 84.7 104 40.4
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.2e-13 80.5 88 56.8
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 3.2e-12 76.6 40 85.0
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 7.0e-12 75.5 158 36.1
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.5e-11 73.2 85 56.5
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 3.0e-10 70.1 31 87.1
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.6e-09 65.9 53 62.3


User provided reference genes

Program Settings