Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43573 Davidia involucrata HOM05D002708 ORTHO05D003516 2.2e-88 328.9 170 100.0
CSS0041941 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 4.1e-82 308.1 170 91.8
GSVIVG01036012001 Vitis vinifera HOM05D002708 ORTHO05D003516 4.1e-82 308.1 170 92.9
Hma1.2p1_0021F.1_g014376 Hydrangea macrophylla HOM05D002708 ORTHO05D003516 5.3e-82 307.8 170 91.2
Dinv44002 Davidia involucrata HOM05D002708 ORTHO05D003516 1.6e-81 306.2 170 91.8
Manes.16G132500 Manihot esculenta HOM05D002708 ORTHO05D003516 2.0e-81 305.8 171 91.8
MELO3C023701.2 Cucumis melo HOM05D002708 ORTHO05D003516 3.5e-81 305.1 168 91.1
CsaV3_7G024030 Cucumis sativus L. HOM05D002708 ORTHO05D003516 3.5e-81 305.1 168 91.1
ClCG09G010490 Citrullus lanatus HOM05D002708 ORTHO05D003516 1.7e-80 302.8 168 91.1
Lj9A548G53 Lonicera japonica HOM05D002708 ORTHO05D003516 6.5e-80 300.8 165 92.7
MELO3C013234.2 Cucumis melo HOM05D002708 ORTHO05D003516 1.5e-79 299.7 168 89.3
Eucgr.J02249 Eucalyptus grandis HOM05D002708 ORTHO05D003516 2.5e-79 298.9 166 91.0
Manes.03G006600 Manihot esculenta HOM05D002708 ORTHO05D003516 2.5e-79 298.9 171 89.5
CsaV3_7G021200 Cucumis sativus L. HOM05D002708 ORTHO05D003516 3.2e-79 298.5 168 88.7
Oeu002888.1 Olea europaea HOM05D002708 ORTHO05D003516 5.5e-79 297.7 165 90.3
Sabra06G0209700 Salix brachista HOM05D002708 ORTHO05D003516 7.2e-79 297.4 171 88.9
Sed0015739 Sechium edule HOM05D002708 ORTHO05D003516 1.2e-78 296.6 165 90.9
SalBow5G4312 Salvia bowleyana HOM05D002708 ORTHO05D003516 4.7e-78 294.7 165 88.5
vmacro21095 Vaccinium macrocarpon HOM05D002708 ORTHO05D003516 4.7e-78 294.7 170 89.4
Glyma.03G002400 Glycine max HOM05D002708 ORTHO05D003516 6.1e-78 294.3 170 85.3
Prupe.6G358600 Prunus persica HOM05D002708 ORTHO05D003516 6.1e-78 294.3 165 89.1
VMungo1309G2216 Vigna mungo HOM05D002708 ORTHO05D003516 1.4e-77 293.1 170 85.3
Oeu037396.1 Olea europaea HOM05D002708 ORTHO05D003516 1.8e-77 292.7 165 88.5
DCAR_029539 Daucus carota HOM05D002708 ORTHO05D003516 2.3e-77 292.4 170 86.5
MSTRG.20407 Avicennia marina HOM05D002708 ORTHO05D003516 4.0e-77 291.6 164 87.8
Glyma.07G107700 Glycine max HOM05D002708 ORTHO05D003516 4.0e-77 291.6 170 84.1
Phvul.009G084000 Phaseolus vulgaris HOM05D002708 ORTHO05D003516 4.0e-77 291.6 170 84.1
Phvul.009G084100 Phaseolus vulgaris HOM05D002708 ORTHO05D003516 4.0e-77 291.6 170 84.1
COL.COLO4_17667 Corchorus olitorius HOM05D002708 ORTHO05D003516 5.2e-77 291.2 162 89.5
PGSC0003DMG400001674 Solanum tuberosum HOM05D002708 ORTHO05D003516 8.8e-77 290.4 170 84.7
CAN.G1480.4 Capsicum annuum HOM05D002708 ORTHO05D003516 1.1e-76 290.0 170 84.7
Nitab4.5_0001476g0150 Nicotiana tabacum HOM05D002708 ORTHO05D003516 1.5e-76 289.7 170 83.5
arahy.Tifrunner.gnm1.ann1.V30RJW Arachis hypogaea HOM05D002708 ORTHO05D003516 2.0e-76 289.3 165 87.3
Lalb_Chr08g0244681 Lupinus albus HOM05D002708 ORTHO05D003516 2.0e-76 289.3 165 86.7
Lalb_Chr23g0268061 Lupinus albus HOM05D002708 ORTHO05D003516 2.0e-76 289.3 170 84.7
Duzib052G0664 Durio zibethinus HOM05D002708 ORTHO05D003516 3.3e-76 288.5 166 88.6
TAR375G0643 Trochodendron aralioides HOM05D002708 ORTHO05D003516 4.4e-76 288.1 170 86.5
Sed0010327 Sechium edule HOM05D002708 ORTHO05D003516 7.5e-76 287.3 170 85.3
Cc00_g16980 Coffea canephora HOM05D002708 ORTHO05D003516 9.7e-76 287.0 165 86.7
Sc20g0000810 Simmondsia chinensis HOM05D002708 ORTHO05D003516 1.3e-75 286.6 168 83.9
TWI32G0606 Tripterygium wilfordii HOM05D002708 ORTHO05D003516 1.3e-75 286.6 170 85.9
Ca_15806_v3 Cicer arietinum L. HOM05D002708 ORTHO05D003516 2.2e-75 285.8 170 82.4
Lj1g0003503 Lotus japonicus HOM05D002708 ORTHO05D003516 6.3e-75 284.3 165 84.2
HanXRQChr11g0341881 Helianthus annuus HOM05D002708 ORTHO05D003516 8.2e-75 283.9 162 86.4
Sabra18G0018700 Salix brachista HOM05D002708 ORTHO05D003516 8.2e-75 283.9 171 86.5
Hund22205 Selenicereus undatus HOM05D002708 ORTHO05D003516 8.2e-75 283.9 168 82.7
HanXRQChr11g0352181 Helianthus annuus HOM05D002708 ORTHO05D003516 1.4e-74 283.1 162 86.4
ECA248G0935 Erigeron canadensis HOM05D002708 ORTHO05D003516 2.4e-74 282.3 162 87.0
MBI19_g28098_MAGBIO Magnolia biondii HOM05D002708 ORTHO05D003516 3.1e-74 282.0 169 84.6
Psat5g034880 Pisum sativum HOM05D002708 ORTHO05D003516 3.1e-74 282.0 170 80.0
Gorai.008G047600 Gossypium raimondii HOM05D002708 ORTHO05D003516 4.1e-74 281.6 162 87.7
Lsat_1_v5_gn_1_83221 Lactuca sativa HOM05D002708 ORTHO05D003516 1.2e-73 280.0 161 86.3
PGR031G2892 Punica granatum HOM05D002708 ORTHO05D003516 1.2e-73 280.0 164 86.0
Gohir.D12G045200 Gossypium hirsutum HOM05D002708 ORTHO05D003516 2.0e-73 279.3 162 87.0
Nn4g24628 Nelumbo nucifera HOM05D002708 ORTHO05D003516 2.7e-73 278.9 168 83.9
unitig_0.g1327 Utricularia gibba HOM05D002708 ORTHO05D003516 2.7e-73 278.9 165 83.0
Actinidia21606 Actinidia chinensis HOM05D002708 ORTHO05D003516 4.5e-73 278.1 165 86.7
CDE12G0538 Ceratophyllum demersum HOM05D002708 ORTHO05D003516 5.9e-73 277.7 170 81.8
Lsat_1_v5_gn_7_11740 Lactuca sativa HOM05D002708 ORTHO05D003516 7.7e-73 277.3 163 84.0
ATR0693G135 Amborella trichopoda HOM05D002708 ORTHO05D003516 2.2e-72 275.8 166 82.5
Ciclev10007609m.g Citrus clementina HOM05D002708 ORTHO05D003516 2.9e-72 275.4 161 85.7
Nitab4.5_0012432g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 3.8e-72 275.0 194 72.7
Medtr3g105430 Medicago truncatula HOM05D002708 ORTHO05D003516 6.5e-72 274.2 165 80.6
Thecc.02G010700 Theobroma cacao HOM05D002708 ORTHO05D003516 6.5e-72 274.2 165 83.6
Cfa017363 Carpinus fangiana HOM05D002708 ORTHO05D003516 1.1e-71 273.5 165 83.6
Nn3g18494 Nelumbo nucifera HOM05D002708 ORTHO05D003516 1.1e-71 273.5 170 82.4
Potri.006G267500 Populus trichocarpa HOM05D002708 ORTHO05D003516 3.2e-71 271.9 171 84.2
PSO063G5514 Papaver somniferum HOM05D002708 ORTHO05D003516 5.5e-71 271.2 170 78.2
PSO782G1674 Papaver somniferum HOM05D002708 ORTHO05D003516 7.2e-71 270.8 170 78.2
Sopen01g035200 Solanum pennellii HOM05D002708 ORTHO05D003516 9.4e-71 270.4 170 79.4
Aqoxy7G03410 Aquilegia oxysepala HOM05D002708 ORTHO05D003516 1.2e-70 270.0 165 81.2
MD04G1241100 Malus domestica HOM05D002708 ORTHO05D003516 1.2e-70 270.0 165 81.8
PSO017G2439 Papaver somniferum HOM05D002708 ORTHO05D003516 2.7e-70 268.9 170 77.6
Potri.018G015200 Populus trichocarpa HOM05D002708 ORTHO05D003516 2.7e-70 268.9 171 85.4
arahy.Tifrunner.gnm1.ann1.9YLT9A Arachis hypogaea HOM05D002708 ORTHO05D003516 3.6e-70 268.5 165 81.8
CSS0039264 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 3.6e-70 268.5 162 85.2
Gohir.D02G238500 Gossypium hirsutum HOM05D002708 ORTHO05D003516 3.6e-70 268.5 165 82.4
Gorai.005G267000 Gossypium raimondii HOM05D002708 ORTHO05D003516 3.6e-70 268.5 165 82.4
Migut.B01470 Erythranthe guttata HOM05D002708 ORTHO05D003516 4.7e-70 268.1 165 82.4
Haze_20811 Corylus avellana HOM05D002708 ORTHO05D003516 6.1e-70 267.7 165 82.4
Lj1g0008805 Lotus japonicus HOM05D002708 ORTHO05D003516 6.1e-70 267.7 170 77.6
unitig_0.g1581 Utricularia gibba HOM05D002708 ORTHO05D003516 6.1e-70 267.7 153 86.3
Gohir.A03G216900 Gossypium hirsutum HOM05D002708 ORTHO05D003516 8.0e-70 267.3 165 81.8
CSS0024835 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 1.8e-69 266.2 162 84.6
Peaxi162Scf01124g00013 Petunia axillaris HOM05D002708 ORTHO05D003516 3.0e-69 265.4 170 77.1
CSS0029201 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 8.8e-69 263.8 162 85.2
SEGI_26246 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 8.8e-69 263.8 166 79.5
Haze_24936 Corylus avellana HOM05D002708 ORTHO05D003516 2.0e-68 262.7 165 82.4
ECA248G3827 Erigeron canadensis HOM05D002708 ORTHO05D003516 2.6e-68 262.3 162 82.1
TWI63G0006 Tripterygium wilfordii HOM05D002708 ORTHO05D003516 3.4e-68 261.9 168 81.0
Solyc01g088370.3 Solanum lycopersicum HOM05D002708 ORTHO05D003516 5.7e-68 261.2 170 77.1
Gohir.A12G046100 Gossypium hirsutum HOM05D002708 ORTHO05D003516 1.7e-67 259.6 162 81.5
RcHm_v2.0_Chr3g0448281 Rosa chinensis HOM05D002708 ORTHO05D003516 3.7e-67 258.5 163 78.5
BraA04t17520Z Brassica rapa HOM05D002708 ORTHO05D003516 1.1e-66 256.9 166 77.7
QL02p018118 Quercus lobata HOM05D002708 ORTHO05D003516 1.8e-66 256.1 145 90.3
A04p19190 Brassica napus HOM05D002708 ORTHO05D003516 2.4e-66 255.8 166 77.1
SEGI_28578 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 3.1e-66 255.4 166 77.1
HPP92_028478 Vanilla planifolia HOM05D002708 ORTHO05D003516 3.1e-66 255.4 170 75.3
CiPaw.08G004600 Carya illinoinensis HOM05D002708 ORTHO05D003516 4.1e-66 255.0 144 90.3
CANSAT25G3904 Cannabis sativa HOM05D002708 ORTHO05D003516 1.6e-65 253.1 166 80.1
FvH4_6g00800 Fragaria vesca HOM05D002708 ORTHO05D003516 2.0e-65 252.7 162 77.8
FAN14G0317 Fragaria x ananassa HOM05D002708 ORTHO05D003516 2.0e-65 252.7 162 77.8
Nitab4.5_0009957g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 3.5e-65 251.9 170 74.7
FAN05G3540 Fragaria x ananassa HOM05D002708 ORTHO05D003516 5.9e-65 251.1 162 77.2
FAN09G1379 Fragaria x ananassa HOM05D002708 ORTHO05D003516 7.7e-65 250.8 162 77.2
SEGI_02227 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 2.2e-64 249.2 166 75.9
ATR0794G148 Amborella trichopoda HOM05D002708 ORTHO05D003516 3.8e-64 248.4 163 77.9
Cfa002667 Carpinus fangiana HOM05D002708 ORTHO05D003516 5.0e-64 248.1 144 87.5
TPR.G40117 Trifolium pratense HOM05D002708 ORTHO05D003516 5.0e-64 248.1 170 70.6
EL10Ac5g11414 Beta vulgaris HOM05D002708 ORTHO05D003516 8.5e-64 247.3 168 71.4
Zm00001eb024200 Zea mays HOM05D002708 ORTHO05D003516 1.1e-63 246.9 170 71.2
EL10Ac4g08928 Beta vulgaris HOM05D002708 ORTHO05D003516 4.2e-63 245.0 168 72.6
Atru.chr7.2587 Acer truncatum HOM05D002708 ORTHO05D003516 7.2e-63 244.2 141 87.2
Thhalv10000061m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 9.5e-63 243.8 171 74.9
FAN02G3944 Fragaria x ananassa HOM05D002708 ORTHO05D003516 2.7e-62 242.3 178 70.8
AUR62037481 Chenopodium quinoa HOM05D002708 ORTHO05D003516 1.0e-61 240.4 163 73.6
COL.COLO4_30887 Corchorus olitorius HOM05D002708 ORTHO05D003516 1.4e-61 240.0 168 73.2
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 5.2e-61 238.0 171 70.8
AUR62004771 Chenopodium quinoa HOM05D002708 ORTHO05D003516 5.2e-61 238.0 138 81.9
BcaB06g28016 Brassica carinata HOM05D002708 ORTHO05D003516 1.2e-60 236.9 166 73.5
BcaC02g08409 Brassica carinata HOM05D002708 ORTHO05D003516 2.0e-60 236.1 166 73.5
BolC4t27001H Brassica oleracea HOM05D002708 ORTHO05D003516 2.0e-60 236.1 166 73.5
Carub.0006s2495 Capsella rubella HOM05D002708 ORTHO05D003516 2.6e-60 235.7 163 74.8
C04p54590 Brassica napus HOM05D002708 ORTHO05D003516 4.4e-60 235.0 166 72.9
MD12G1258100 Malus domestica HOM05D002708 ORTHO05D003516 1.3e-59 233.4 165 73.9
Cfa013020 Carpinus fangiana HOM05D002708 ORTHO05D003516 2.8e-59 232.3 144 81.9
CDE01G0349 Ceratophyllum demersum HOM05D002708 ORTHO05D003516 3.7e-59 231.9 126 87.3
QL08p065006 Quercus lobata HOM05D002708 ORTHO05D003516 4.1e-58 228.4 165 76.4
THA.LOC104803605 Tarenaya hassleriana HOM05D002708 ORTHO05D003516 4.1e-58 228.4 170 70.0
HanXRQChr03g0088081 Helianthus annuus HOM05D002708 ORTHO05D003516 2.7e-57 225.7 162 74.1
Os10g0569200 Oryza sativa ssp. japonica HOM05D002708 ORTHO05D003516 2.7e-57 225.7 170 68.2
Sp4g03800 Schrenkiella parvula HOM05D002708 ORTHO05D003516 2.7e-57 225.7 166 72.3
TPR.G21430 Trifolium pratense HOM05D002708 ORTHO05D003516 1.3e-56 223.4 141 76.6
Mapoly0108s0028 Marchantia polymorpha HOM05D002708 ORTHO05D003516 2.9e-56 222.2 168 65.5
AL6G38780 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 5.0e-56 221.5 163 69.9
BraA09t41006Z Brassica rapa HOM05D002708 ORTHO05D003516 5.0e-56 221.5 166 71.1
A09p56110 Brassica napus HOM05D002708 ORTHO05D003516 1.9e-55 219.5 166 70.5
Actinidia33292 Actinidia chinensis HOM05D002708 ORTHO05D003516 3.3e-55 218.8 165 72.7
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 7.3e-55 217.6 142 78.2
Pp3c7_370 Physcomitrium patens HOM05D002708 ORTHO05D003516 7.3e-55 217.6 169 65.7
AL6G39390 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 1.2e-54 216.9 142 78.2
ClCG09G010530 Citrullus lanatus HOM05D002708 ORTHO05D003516 1.2e-54 216.9 170 71.8
BcaC07g40905 Brassica carinata HOM05D002708 ORTHO05D003516 1.6e-54 216.5 166 69.9
C08p39040 Brassica napus HOM05D002708 ORTHO05D003516 1.6e-54 216.5 166 69.9
BolC8t51477H Brassica oleracea HOM05D002708 ORTHO05D003516 1.6e-54 216.5 166 69.9
Pp3c11_25960 Physcomitrium patens HOM05D002708 ORTHO05D003516 1.6e-54 216.5 169 65.1
Lsat_1_v5_gn_8_82921 Lactuca sativa HOM05D002708 ORTHO05D003516 6.1e-54 214.5 165 72.1
AT5G27640 Arabidopsis thaliana HOM05D002708 ORTHO05D003516 1.0e-53 213.8 142 77.5
AT5G25780 Arabidopsis thaliana HOM05D002708 ORTHO05D003516 1.2e-52 210.3 143 74.1
CARHR294550 Cardamine hirsuta HOM05D002708 ORTHO05D003516 9.8e-52 207.2 142 76.1
Peaxi162Scf01124g00123 Petunia axillaris HOM05D002708 ORTHO05D003516 1.7e-51 206.5 149 70.5
Cpa.g.sc17.146 Carica papaya HOM05D002708 ORTHO05D003516 2.9e-51 205.7 108 93.5
SGA_v2.0_scaffold85G26804 Striga asiatica HOM05D002708 ORTHO05D003516 5.4e-50 201.4 164 65.9
CBR_g32387 Chara braunii HOM05D002708 ORTHO05D003516 2.0e-49 199.5 163 62.0
PSO384G0469 Papaver somniferum HOM05D002708 ORTHO05D003516 2.1e-46 189.5 146 68.5
BcaNung04121 Brassica carinata HOM05D002708 ORTHO05D003516 2.3e-45 186.0 165 60.6
SGA_v2.0_scaffold578G53025 Striga asiatica HOM05D002708 ORTHO05D003516 2.0e-44 183.0 105 83.8
Thhalv10027018m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 2.5e-39 166.0 166 55.4
Aa31LG2G18580 Aethionema arabicum HOM05D002708 ORTHO05D003516 3.4e-36 155.6 163 52.8
SMO270G0119 Selaginella moellendorffii HOM05D002708 ORTHO05D003516 9.8e-36 154.1 138 57.2
BcaNung01503 Brassica carinata HOM05D002708 ORTHO05D003516 4.9e-35 151.8 130 59.2
C07p58860 Brassica napus HOM05D002708 ORTHO05D003516 4.9e-35 151.8 129 59.7
BolC7t46333H Brassica oleracea HOM05D002708 ORTHO05D003516 4.9e-35 151.8 129 59.7
MCO03G077 Micromonas commoda HOM05D002708 ORTHO05D003516 7.1e-34 147.9 173 48.6
Cre03.g190100 Chlamydomonas reinhardtii HOM05D002708 ORTHO05D003516 2.6e-28 129.4 163 47.9
PRCOL_00000791 Prasinoderma coloniale HOM05D002708 ORTHO05D003516 2.6e-28 129.4 163 46.0
Medtr7g056267 Medicago truncatula HOM05D002708 ORTHO05D003516 6.4e-27 124.8 88 71.6
AagrBONN_evm.TU.Sc2ySwM_117.472 Anthoceros agrestis HOM05D002708 ORTHO05D003516 1.1e-21 107.5 55 83.6
Nitab4.5_0015087g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 4.0e-21 105.5 54 90.7
AL1G59060 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 9.3e-18 94.4 61 72.1
HPP92_005389 Vanilla planifolia HOM05D002708 ORTHO05D003516 1.7e-16 90.1 58 79.3
QL08p062901 Quercus lobata HOM05D002708 ORTHO05D003516 2.5e-15 86.3 130 44.6
RhsimUnG0158600 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.1e-14 83.2 38 97.4
Rhsim01G0145200 Rhododendron simsii HOM05D002708 ORTHO05D003516 8.1e-14 81.3 49 79.6
Rhsim05G0131800 Rhododendron simsii HOM05D002708 ORTHO05D000013 2.0e-12 76.6 41 85.4
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 9.9e-12 74.3 93 48.4
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 3.8e-11 72.4 105 41.0
TPR.G40646 Trifolium pratense HOM05D002708 ORTHO05D003516 1.2e-09 67.4 48 72.9
Thhalv10012255m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 2.1e-09 66.6 101 43.6
QL02p088243 Quercus lobata HOM05D002708 ORTHO05D003516 2.7e-09 66.2 158 33.5
Lj4g0017545 Lotus japonicus HOM05D002708 ORTHO05D003516 6.7e-08 61.6 37 78.4
Aqoxy7G03412 Aquilegia oxysepala HOM05D002708 ORTHO05D003516 4.3e-07 58.9 48 68.8
QL02p087594 Quercus lobata HOM05D002708 ORTHO05D003516 1.6e-06 57.0 126 37.3
Aqoxy7G03406 Aquilegia oxysepala HOM05D002708 ORTHO05D003516 3.7e-06 55.8 48 68.8


User provided reference genes

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