Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40317 Davidia involucrata HOM05D000246 ORTHO05D007179 2.0e-61 238.8 110 100.0
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 3.3e-40 168.3 107 77.6
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 8.9e-38 160.2 107 70.1
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 2.0e-37 159.1 108 68.5
CSS0023091 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 2.6e-37 158.7 109 68.8
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 9.8e-37 156.8 107 69.2
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 3.7e-36 154.8 108 68.5
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 6.4e-36 154.1 106 68.9
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 2.4e-35 152.1 107 67.3
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 2.4e-35 152.1 107 66.4
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 7.0e-35 150.6 106 65.1
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 2.7e-34 148.7 107 63.6
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 4.6e-34 147.9 107 67.3
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 4.6e-34 147.9 107 66.4
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 6.0e-34 147.5 108 66.7
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 7.8e-34 147.1 107 63.6
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 1.3e-33 146.4 107 64.5
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 1.7e-33 146.0 107 68.2
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 4.3e-32 141.4 108 62.0
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 7.3e-32 140.6 106 64.2
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 9.5e-32 140.2 107 61.7
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 1.2e-31 139.8 107 61.7
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 1.6e-31 139.4 107 60.7
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 2.1e-31 139.0 107 61.7
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 2.1e-31 139.0 101 68.3
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 4.7e-31 137.9 107 60.7
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 6.2e-31 137.5 107 62.6
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 8.1e-31 137.1 107 58.9
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 1.1e-30 136.7 107 60.7
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.1e-30 136.7 107 59.8
Solyc01g099460.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.4e-30 136.3 107 60.7
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.8e-30 136.0 107 58.9
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 4.0e-30 134.8 107 60.7
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 5.2e-30 134.4 104 67.3
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 5.2e-30 134.4 107 61.7
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 1.2e-29 133.3 106 58.5
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 1.2e-29 133.3 106 58.5
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.5e-29 132.9 106 58.5
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 1.5e-29 132.9 107 58.9
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 3.4e-29 131.7 107 59.8
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 4.4e-29 131.3 106 57.5
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 4.4e-29 131.3 108 59.3
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 7.5e-29 130.6 108 59.3
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 9.9e-29 130.2 116 56.0
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 9.9e-29 130.2 106 57.5
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 1.3e-28 129.8 107 54.2
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 3.7e-28 128.3 107 57.0
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 6.4e-28 127.5 109 56.0
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 8.3e-28 127.1 106 56.6
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.4e-27 126.3 122 50.0
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 1.9e-27 125.9 111 56.8
MBI19_g41249_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 3.2e-27 125.2 102 54.9
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 4.1e-27 124.8 107 55.1
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 4.1e-27 124.8 105 58.1
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 5.4e-27 124.4 109 56.9
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 5.4e-27 124.4 107 57.9
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 5.4e-27 124.4 107 56.1
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 5.4e-27 124.4 109 56.0
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 7.1e-27 124.0 108 54.6
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 7.1e-27 124.0 107 56.1
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 7.1e-27 124.0 107 57.0
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.2e-26 123.2 106 54.7
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 1.6e-26 122.9 107 57.9
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 1.6e-26 122.9 109 54.1
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 2.7e-26 122.1 107 57.9
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 3.5e-26 121.7 109 53.2
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 3.5e-26 121.7 109 56.9
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 4.6e-26 121.3 107 55.1
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 4.6e-26 121.3 103 58.3
Eucgr.F00584 Eucalyptus grandis HOM05D000246 ORTHO05D007179 7.8e-26 120.6 111 54.1
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 1.3e-25 119.8 110 55.5
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 1.3e-25 119.8 109 55.0
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 1.3e-25 119.8 107 54.2
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 3.0e-25 118.6 109 51.4
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 3.9e-25 118.2 106 52.8
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 5.1e-25 117.9 108 53.7
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 5.1e-25 117.9 108 53.7
Eucgr.L01167 Eucalyptus grandis HOM05D000246 ORTHO05D007179 5.1e-25 117.9 115 50.4
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 8.6e-25 117.1 109 52.3
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 1.5e-24 116.3 109 53.2
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 5.6e-24 114.4 108 54.6
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 7.3e-24 114.0 100 51.0
Eucgr.H04508 Eucalyptus grandis HOM05D000246 ORTHO05D007179 7.3e-24 114.0 63 74.6
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 7.3e-24 114.0 149 44.3
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 2.1e-23 112.5 104 51.9
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 2.4e-22 109.0 108 50.0
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 1.2e-21 106.7 76 69.7
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 1.7e-20 102.8 115 47.0
CDE01G0252 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 5.4e-19 97.8 62 66.1
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 3.5e-18 95.1 108 42.6
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 1.0e-17 93.6 114 42.1
Solyc01g099440.4 Solanum lycopersicum HOM05D000246 ORTHO05D007179 5.1e-17 91.3 114 47.4
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 6.2e-15 84.3 60 55.0
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.5e-13 79.7 86 50.0
Sopen01g043010 Solanum pennellii HOM05D036645 ORTHO05D051249 4.4e-13 78.2 44 75.0
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 3.8e-12 75.1 76 51.3
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 3.2e-11 72.0 110 37.3
Pp3c20_2130 Physcomitrium patens HOM05D000246 ORTHO05D007179 1.2e-10 70.1 62 48.4
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 7.3e-08 60.8 32 78.1
SHI18109 Sapria himalayana HOM05D000246 ORTHO05D007179 1.6e-07 59.7 33 81.8
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 2.4e-06 55.8 109 34.9
Sopen02g033150 Solanum pennellii HOM05D000246 ORTHO05D007179 2.4e-06 55.8 67 46.3


User provided reference genes

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