Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 2.0e-126 456.1 279 100.0
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 7.1e-92 341.3 246 87.0
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.2e-84 315.8 246 79.3
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 9.3e-84 314.3 246 78.9
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 4.6e-83 312.0 251 82.9
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 3.0e-82 309.3 258 77.1
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.9e-82 308.9 247 79.4
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.1e-81 307.4 238 78.6
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 9.7e-81 304.3 252 77.4
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 9.7e-81 304.3 247 77.7
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 2.2e-80 303.1 246 80.1
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.2e-80 303.1 253 66.8
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 2.8e-80 302.8 236 79.2
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 6.3e-80 301.6 246 77.2
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 2.4e-79 299.7 246 76.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.4e-79 299.7 246 76.8
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 2.4e-79 299.7 246 78.0
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 9.1e-79 297.7 246 78.0
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 9.1e-79 297.7 247 78.5
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 2.6e-78 296.2 246 76.8
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 2.6e-78 296.2 246 74.8
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 2.6e-78 296.2 246 76.8
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 4.5e-78 295.4 269 72.1
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 5.9e-78 295.0 246 76.4
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.7e-77 293.5 248 78.6
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 1.7e-77 293.5 246 77.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.2e-77 293.1 255 74.9
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.9e-77 292.7 237 78.1
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 6.5e-77 291.6 270 71.5
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.4e-76 290.4 246 75.2
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 3.2e-76 289.3 246 76.4
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.2e-76 289.3 246 75.2
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 4.2e-76 288.9 255 77.6
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 5.5e-76 288.5 250 76.4
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.5e-76 288.5 248 77.0
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 7.2e-76 288.1 246 76.0
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 7.2e-76 288.1 246 73.6
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 2.7e-75 286.2 240 77.5
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 2.7e-75 286.2 246 73.6
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 2.7e-75 286.2 246 76.4
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 2.7e-75 286.2 246 75.2
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 2.7e-75 286.2 247 74.9
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 3.6e-75 285.8 247 75.7
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.6e-75 285.8 246 74.4
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 3.6e-75 285.8 247 74.5
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 6.1e-75 285.0 248 75.4
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 7.9e-75 284.6 248 76.2
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.0e-74 284.3 247 75.7
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.4e-74 283.9 246 74.8
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.8e-74 283.5 248 75.0
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 2.3e-74 283.1 246 75.6
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 3.0e-74 282.7 274 69.7
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 3.0e-74 282.7 248 75.8
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 5.1e-74 282.0 249 75.9
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 5.1e-74 282.0 247 73.3
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 6.7e-74 281.6 249 75.1
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 6.7e-74 281.6 206 84.0
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 8.8e-74 281.2 248 75.0
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 8.8e-74 281.2 249 79.5
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-73 280.8 248 76.2
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.5e-73 280.4 248 77.8
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.5e-73 280.4 249 75.5
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.5e-73 280.4 247 73.7
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 2.0e-73 280.0 249 72.7
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 2.6e-73 279.6 246 74.4
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 2.6e-73 279.6 241 73.4
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 3.3e-73 279.3 249 74.3
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 4.4e-73 278.9 252 73.4
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 5.7e-73 278.5 247 73.7
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 7.4e-73 278.1 251 72.9
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 7.4e-73 278.1 246 75.2
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 7.4e-73 278.1 243 73.3
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 9.7e-73 277.7 247 74.1
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 2.2e-72 276.6 248 73.4
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.8e-72 276.2 246 74.8
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 3.7e-72 275.8 246 75.6
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 4.8e-72 275.4 250 71.2
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 4.8e-72 275.4 247 72.9
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 6.3e-72 275.0 246 75.2
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 8.2e-72 274.6 250 73.6
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 1.1e-71 274.2 247 72.9
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 1.1e-71 274.2 248 73.8
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 1.8e-71 273.5 247 73.3
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.8e-71 273.5 248 73.0
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.1e-71 272.3 253 73.5
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 4.1e-71 272.3 247 72.1
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 5.3e-71 271.9 247 72.1
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 5.3e-71 271.9 247 72.1
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 5.3e-71 271.9 251 73.3
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.9e-71 271.6 251 73.3
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 9.1e-71 271.2 247 72.9
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 9.1e-71 271.2 247 70.9
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 9.1e-71 271.2 260 70.8
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.5e-70 270.4 249 74.3
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 2.0e-70 270.0 247 72.9
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.0e-70 270.0 257 70.8
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 2.6e-70 269.6 247 72.1
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 2.6e-70 269.6 247 72.1
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 4.5e-70 268.9 249 73.1
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 7.7e-70 268.1 247 70.4
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.0e-69 267.7 247 69.6
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.7e-69 266.9 247 73.7
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.7e-69 266.9 248 71.4
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.2e-69 266.5 249 72.7
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 2.2e-69 266.5 248 71.0
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 5.0e-69 265.4 247 68.4
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 5.0e-69 265.4 247 70.0
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 5.0e-69 265.4 247 69.2
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 6.5e-69 265.0 247 68.8
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 6.5e-69 265.0 247 70.9
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 8.5e-69 264.6 249 71.5
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.1e-68 264.2 272 65.1
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 1.4e-68 263.8 247 68.8
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.4e-68 263.8 250 71.2
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.9e-68 263.5 247 69.2
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.9e-68 263.5 247 69.2
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.9e-68 263.5 248 70.2
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 2.5e-68 263.1 247 68.8
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 2.5e-68 263.1 247 68.8
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 3.2e-68 262.7 247 69.2
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 4.2e-68 262.3 247 68.8
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 5.5e-68 261.9 250 70.8
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 5.5e-68 261.9 279 65.2
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.6e-67 260.4 198 83.8
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 2.7e-67 259.6 249 71.5
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 3.6e-67 259.2 250 75.2
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 7.9e-67 258.1 249 73.5
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.3e-66 256.5 198 82.3
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 3.9e-66 255.8 242 72.7
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 6.7e-66 255.0 177 91.5
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 8.8e-66 254.6 246 68.7
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-65 254.2 194 80.9
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.5e-65 253.8 241 71.4
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 1.5e-65 253.8 248 67.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 3.7e-64 249.2 252 70.2
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 3.7e-64 249.2 251 70.5
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 4.8e-64 248.8 255 69.0
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.1e-63 247.7 247 67.6
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.2e-62 244.2 176 90.3
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 2.9e-61 239.6 260 64.6
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 7.2e-60 235.0 243 68.7
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.6e-59 233.8 178 86.5
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.1e-59 233.4 177 72.9
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 6.1e-59 231.9 246 64.2
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 6.7e-58 228.4 247 67.2
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 6.7e-58 228.4 186 70.4
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 2.2e-56 223.4 214 71.5
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 4.8e-56 222.2 180 77.2
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 5.3e-55 218.8 190 72.6
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.3e-53 214.2 196 75.5
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.3e-53 214.2 196 75.5
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.2e-53 213.4 186 73.1
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.2e-52 209.5 168 79.8
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.2e-50 202.2 247 51.4
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 6.8e-50 201.8 148 91.9
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.0e-49 200.3 193 67.4
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 2.0e-49 200.3 162 82.1
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 3.4e-49 199.5 169 66.3
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.8e-47 193.7 148 85.8
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 1.2e-46 191.0 169 59.2
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 5.9e-46 188.7 169 75.1
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 7.7e-46 188.3 192 58.9
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 8.6e-45 184.9 147 69.4
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 5.6e-36 155.6 100 78.0
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 8.0e-35 151.8 96 76.0
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 3.0e-34 149.8 175 56.6
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 1.2e-33 147.9 88 80.7
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 4.6e-30 136.0 108 75.0
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 3.0e-29 133.3 190 44.2
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.2e-27 127.9 88 76.1
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.2e-22 111.3 58 91.4
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.6e-22 110.9 145 56.6
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-17 94.7 146 54.1
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.6e-17 93.6 107 65.4
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 2.2e-16 90.5 83 80.7
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 3.2e-15 86.7 122 48.4
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.2e-15 86.7 51 82.4
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 1.9e-12 77.4 64 65.6
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.2e-06 58.2 42 76.2
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 2.1e-06 57.4 81 35.8


User provided reference genes

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