Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38471 Davidia involucrata HOM05D004180 ORTHO05D005323 2.1e-88 328.9 158 100.0
Gohir.D11G038900 Gossypium hirsutum HOM05D004180 ORTHO05D005323 9.6e-86 320.1 158 96.8
Duzib084G0269 Durio zibethinus HOM05D004180 ORTHO05D005323 1.6e-85 319.3 158 96.2
Atru.chr9.1011 Acer truncatum HOM05D004180 ORTHO05D005323 2.1e-85 318.9 158 95.6
Gohir.A11G035300 Gossypium hirsutum HOM05D004180 ORTHO05D005323 3.7e-85 318.2 158 96.2
COL.COLO4_09266 Corchorus olitorius HOM05D004180 ORTHO05D005323 4.8e-85 317.8 158 95.6
TAR622G0515 Trochodendron aralioides HOM05D004180 ORTHO05D005323 1.1e-84 316.6 158 94.9
Thecc.03G122700 Theobroma cacao HOM05D004180 ORTHO05D005323 1.4e-84 316.2 158 95.6
PGR083G1171 Punica granatum HOM05D004180 ORTHO05D005323 1.8e-84 315.8 158 95.6
Eucgr.B00149 Eucalyptus grandis HOM05D004180 ORTHO05D005323 2.4e-84 315.5 156 96.2
Glyma.04G192900 Glycine max HOM05D004180 ORTHO05D005323 2.4e-84 315.5 157 95.5
Actinidia19386 Actinidia chinensis HOM05D004180 ORTHO05D005323 5.3e-84 314.3 158 94.9
arahy.Tifrunner.gnm1.ann1.Y3SZAS Arachis hypogaea HOM05D004180 ORTHO05D005323 5.3e-84 314.3 158 94.9
Manes.06G115200 Manihot esculenta HOM05D004180 ORTHO05D005323 5.3e-84 314.3 156 95.5
ATR0824G280 Amborella trichopoda HOM05D004180 ORTHO05D005323 6.9e-84 313.9 157 94.3
Glyma.06G173000 Glycine max HOM05D004180 ORTHO05D005323 6.9e-84 313.9 157 94.9
Hma1.2p1_0046F.1_g027540 Hydrangea macrophylla HOM05D004180 ORTHO05D005323 6.9e-84 313.9 157 94.9
GSVIVG01007544001 Vitis vinifera HOM05D004180 ORTHO05D005323 6.9e-84 313.9 158 94.9
EL10Ac7g18073 Beta vulgaris HOM05D004180 ORTHO05D005323 9.0e-84 313.5 158 94.3
VMungo1309G1699 Vigna mungo HOM05D004180 ORTHO05D005323 9.0e-84 313.5 156 95.5
CSS0024351 Camellia sinensis var. sinensis HOM05D004180 ORTHO05D005323 1.5e-83 312.8 158 94.3
CiPaw.12G035600 Carya illinoinensis HOM05D004180 ORTHO05D005323 1.5e-83 312.8 156 94.9
CDE02G3278 Ceratophyllum demersum HOM05D004180 ORTHO05D005323 1.5e-83 312.8 158 94.3
Lj1g0008389 Lotus japonicus HOM05D004180 ORTHO05D005323 2.0e-83 312.4 158 94.9
THA.LOC104811605 Tarenaya hassleriana HOM05D004180 ORTHO05D005323 2.0e-83 312.4 158 93.7
arahy.Tifrunner.gnm1.ann1.598RU2 Arachis hypogaea HOM05D004180 ORTHO05D005323 2.6e-83 312.0 158 94.3
CAN.G352.60 Capsicum annuum HOM05D004180 ORTHO05D005323 2.6e-83 312.0 158 94.3
Sc10g0010340 Simmondsia chinensis HOM05D004180 ORTHO05D005323 2.6e-83 312.0 158 94.3
Ah.08g218120 Amaranthus hybridus HOM05D004180 ORTHO05D005323 3.4e-83 311.6 158 93.7
HanXRQChr02g0035141 Helianthus annuus HOM05D004180 ORTHO05D005323 3.4e-83 311.6 158 93.0
PGSC0003DMG401015202 Solanum tuberosum HOM05D004180 ORTHO05D005323 3.4e-83 311.6 158 94.9
CANSAT80G2894 Cannabis sativa HOM05D004180 ORTHO05D005323 4.5e-83 311.2 158 93.7
Haze_07277 Corylus avellana HOM05D004180 ORTHO05D005323 4.5e-83 311.2 156 94.2
FAN13G2268 Fragaria x ananassa HOM05D004180 ORTHO05D005323 4.5e-83 311.2 158 93.7
MD14G1163700 Malus domestica HOM05D004180 ORTHO05D005323 4.5e-83 311.2 158 93.7
Oeu037582.1 Olea europaea HOM05D004180 ORTHO05D005323 4.5e-83 311.2 158 92.4
Prupe.5G157100 Prunus persica HOM05D004180 ORTHO05D005323 4.5e-83 311.2 158 93.7
Rhsim12G0172100 Rhododendron simsii HOM05D004180 ORTHO05D005323 5.9e-83 310.8 158 93.7
Sopen03g030100 Solanum pennellii HOM05D004180 ORTHO05D005323 5.9e-83 310.8 158 94.3
AUR62001277 Chenopodium quinoa HOM05D004180 ORTHO05D005323 7.6e-83 310.5 158 93.7
FAN04G2334 Fragaria x ananassa HOM05D004180 ORTHO05D005323 7.6e-83 310.5 156 93.6
FAN08G3357 Fragaria x ananassa HOM05D004180 ORTHO05D005323 7.6e-83 310.5 156 93.6
Gorai.003G153300 Gossypium raimondii HOM05D004180 ORTHO05D005323 7.6e-83 310.5 156 93.6
Medtr1g107255 Medicago truncatula HOM05D004180 ORTHO05D005323 7.6e-83 310.5 158 92.4
QL10p005240 Quercus lobata HOM05D004180 ORTHO05D005323 7.6e-83 310.5 156 95.5
FAN18G2865 Fragaria x ananassa HOM05D004180 ORTHO05D005323 1.0e-82 310.1 156 92.9
Gohir.A07G053600 Gossypium hirsutum HOM05D004180 ORTHO05D005323 1.0e-82 310.1 156 93.6
Phvul.009G168900 Phaseolus vulgaris HOM05D004180 ORTHO05D005323 1.0e-82 310.1 157 93.6
Psat6g217640 Pisum sativum HOM05D004180 ORTHO05D005323 1.0e-82 310.1 158 91.8
Solyc03g110910.4 Solanum lycopersicum HOM05D004180 ORTHO05D005323 1.0e-82 310.1 158 94.3
TPR.G3286 Trifolium pratense HOM05D004180 ORTHO05D005323 1.0e-82 310.1 158 91.8
Lalb_Chr08g0236941 Lupinus albus HOM05D004180 ORTHO05D005323 1.3e-82 309.7 156 94.2
Aa31LG3G5910 Aethionema arabicum HOM05D004180 ORTHO05D005323 1.7e-82 309.3 158 93.0
ECA247G0271 Erigeron canadensis HOM05D004180 ORTHO05D005323 1.7e-82 309.3 158 92.4
PSO063G5665 Papaver somniferum HOM05D004180 ORTHO05D005323 1.7e-82 309.3 157 91.1
Hund05645 Selenicereus undatus HOM05D004180 ORTHO05D005323 1.7e-82 309.3 158 93.0
AUR62025729 Chenopodium quinoa HOM05D004180 ORTHO05D005323 2.2e-82 308.9 158 93.0
FvH4_5g07340 Fragaria vesca HOM05D004180 ORTHO05D005323 2.2e-82 308.9 156 92.9
AT5G50320 Arabidopsis thaliana HOM05D004180 ORTHO05D005323 2.9e-82 308.5 158 91.8
Cpa.g.sc4.68 Carica papaya HOM05D004180 ORTHO05D005323 2.9e-82 308.5 158 93.0
Lsat_1_v5_gn_1_8721 Lactuca sativa HOM05D004180 ORTHO05D005323 2.9e-82 308.5 158 91.1
Nn3g16580 Nelumbo nucifera HOM05D004180 ORTHO05D005323 2.9e-82 308.5 158 93.0
TWI14G0632 Tripterygium wilfordii HOM05D004180 ORTHO05D005323 2.9e-82 308.5 158 92.4
MSTRG.22929 Avicennia marina HOM05D004180 ORTHO05D005323 3.8e-82 308.1 158 93.0
Ca_16090_v3 Cicer arietinum L. HOM05D004180 ORTHO05D005323 3.8e-82 308.1 158 92.4
Os04g0484900 Oryza sativa ssp. japonica HOM05D004180 ORTHO05D005323 3.8e-82 308.1 158 91.8
THA.LOC104803140 Tarenaya hassleriana HOM05D004180 ORTHO05D005323 3.8e-82 308.1 158 92.4
vmacro16709 Vaccinium macrocarpon HOM05D004180 ORTHO05D005323 3.8e-82 308.1 158 93.0
vmacro23155 Vaccinium macrocarpon HOM05D004180 ORTHO05D005323 3.8e-82 308.1 158 93.0
Potri.012G092800 Populus trichocarpa HOM05D004180 ORTHO05D005323 5.0e-82 307.8 156 92.9
Cc04_g10350 Coffea canephora HOM05D004180 ORTHO05D005323 6.5e-82 307.4 158 93.0
Potri.015G090500 Populus trichocarpa HOM05D004180 ORTHO05D005323 6.5e-82 307.4 156 92.9
Sed0010285 Sechium edule HOM05D004180 ORTHO05D005323 6.5e-82 307.4 156 93.6
Zm00001eb079280 Zea mays HOM05D004180 ORTHO05D005323 6.5e-82 307.4 158 91.1
AL8G24380 Arabidopsis lyrata HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
BcaB01g02900 Brassica carinata HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
BcaC01g04814 Brassica carinata HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
A03p27780 Brassica napus HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
C03p33510 Brassica napus HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
BolC3t15672H Brassica oleracea HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
BraA03t11989Z Brassica rapa HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
CARHR258210 Cardamine hirsuta HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
Thhalv10013124m.g Eutrema salsugineum HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
Sp6g12400 Schrenkiella parvula HOM05D004180 ORTHO05D005323 8.4e-82 307.0 158 91.1
Carub.0008s1036 Capsella rubella HOM05D004180 ORTHO05D005323 1.4e-81 306.2 156 91.7
Manes.14G055300 Manihot esculenta HOM05D004180 ORTHO05D005323 1.4e-81 306.2 156 92.9
Zm00001eb425150 Zea mays HOM05D004180 ORTHO05D005323 1.9e-81 305.8 158 90.5
RcHm_v2.0_Chr7g0191201 Rosa chinensis HOM05D004180 ORTHO05D005323 3.2e-81 305.1 158 92.4
Sabra12G0067400 Salix brachista HOM05D004180 ORTHO05D005323 5.5e-81 304.3 156 91.7
Ciclev10019518m.g Citrus clementina HOM05D004180 ORTHO05D005323 7.2e-81 303.9 156 92.3
Mapoly0095s0008 Marchantia polymorpha HOM05D004180 ORTHO05D005323 9.3e-81 303.5 155 90.3
vmacro16658 Vaccinium macrocarpon HOM05D004180 ORTHO05D005323 9.3e-81 303.5 158 92.4
CsaV3_1G000820 Cucumis sativus L. HOM05D004180 ORTHO05D005323 1.2e-80 303.1 156 91.7
Gorai.007G041800 Gossypium raimondii HOM05D004180 ORTHO05D005323 2.7e-80 302.0 190 80.0
Pp3c18_6090 Physcomitrium patens HOM05D004180 ORTHO05D005323 3.5e-80 301.6 156 90.4
AagrBONN_evm.TU.Sc2ySwM_344.3483 Anthoceros agrestis HOM05D004180 ORTHO05D005323 4.6e-80 301.2 156 90.4
MELO3C026234.2 Cucumis melo HOM05D004180 ORTHO05D005323 6.1e-80 300.8 156 91.0
SMO137G0131 Selaginella moellendorffii HOM05D004180 ORTHO05D005323 1.1e-78 296.6 156 89.1
SMO170G0003 Selaginella moellendorffii HOM05D004180 ORTHO05D005323 1.1e-78 296.6 156 89.1
Migut.I00474 Erythranthe guttata HOM05D004180 ORTHO05D005323 1.5e-78 296.2 167 85.0
unitig_22.g5936 Utricularia gibba HOM05D004180 ORTHO05D005323 2.5e-78 295.4 156 89.1
CBR_g17965 Chara braunii HOM05D004180 ORTHO05D005323 3.3e-78 295.0 156 89.7
ClCG06G017620 Citrullus lanatus HOM05D004180 ORTHO05D005323 1.3e-77 293.1 176 81.8
HPP92_004592 Vanilla planifolia HOM05D004180 ORTHO05D005323 4.8e-77 291.2 157 89.2
Lj5C100T5 Lonicera japonica HOM05D004180 ORTHO05D005323 6.9e-76 287.3 158 88.6
SGA_v2.0_scaffold338G49249 Striga asiatica HOM05D004180 ORTHO05D005323 1.5e-75 286.2 158 88.0
Oeu044608.1 Olea europaea HOM05D004180 ORTHO05D005323 8.5e-74 280.4 158 84.8
SMO170G0034 Selaginella moellendorffii HOM05D004180 ORTHO05D005323 7.2e-73 277.3 174 77.0
Eucgr.L01338 Eucalyptus grandis HOM05D004180 ORTHO05D005323 2.1e-72 275.8 156 85.9
SalBow5G4032 Salvia bowleyana HOM05D004180 ORTHO05D005323 3.0e-71 271.9 137 93.4
Peaxi162Scf00089g00242 Petunia axillaris HOM05D004180 ORTHO05D005323 8.8e-71 270.4 140 92.1
MCO06G075 Micromonas commoda HOM05D004180 ORTHO05D005323 1.3e-66 256.5 158 77.8
Cre07.g354100 Chlamydomonas reinhardtii HOM05D004180 ORTHO05D005323 5.7e-62 241.1 161 74.5
Cfa018893 Carpinus fangiana HOM05D004180 ORTHO05D005323 2.4e-60 235.7 159 76.1
Nitab4.5_0001311g0030 Nicotiana tabacum HOM05D004180 ORTHO05D005323 5.5e-57 224.6 158 74.1
SMO137G0375 Selaginella moellendorffii HOM05D004180 ORTHO05D005323 7.2e-57 224.2 156 71.2
SMO170G0065 Selaginella moellendorffii HOM05D004180 ORTHO05D005323 7.2e-57 224.2 156 71.8
Nitab4.5_0011188g0020 Nicotiana tabacum HOM05D004180 ORTHO05D005323 1.4e-55 219.9 158 72.8
MBI11_g36312_MAGBIO Magnolia biondii HOM05D004180 ORTHO05D005323 3.0e-55 218.8 107 94.4
MBI11_g17238_MAGBIO Magnolia biondii HOM05D004180 ORTHO05D005323 4.0e-55 218.4 105 96.2
DCAR_025596 Daucus carota HOM05D004180 ORTHO05D005323 3.3e-54 215.3 158 70.3
Aqoxy3G01433 Aquilegia oxysepala HOM05D004180 ORTHO05D005323 5.7e-54 214.5 105 93.3
SEGI_27035 Sequoiadendron giganteum HOM05D004180 ORTHO05D005323 6.3e-53 211.1 105 93.3
Pp3c21_15940 Physcomitrium patens HOM05D004180 ORTHO05D005323 1.3e-50 203.4 154 66.9
SalBow5G4699 Salvia bowleyana HOM05D004180 ORTHO05D005323 1.8e-47 193.0 100 92.0
FvH4_5g07450 Fragaria vesca HOM05D004180 ORTHO05D005323 6.8e-47 191.0 163 63.8
Nn4g22462 Nelumbo nucifera HOM05D004180 ORTHO05D005323 4.4e-46 188.3 92 94.6
SMO137G0321 Selaginella moellendorffii HOM05D004180 ORTHO05D005323 4.0e-39 165.2 86 87.2
SMO137G0281 Selaginella moellendorffii HOM05D004180 ORTHO05D020683 7.8e-19 97.8 52 88.5
Actinidia19390 Actinidia chinensis HOM05D004180 ORTHO05D005323 3.9e-18 95.5 53 86.8
MD06G1155500 Malus domestica HOM05D004180 ORTHO05D005323 2.8e-16 89.4 44 90.9
MD06G1152200 Malus domestica HOM05D004180 ORTHO05D005323 6.6e-10 68.2 54 61.1
Migut.I00277 Erythranthe guttata HOM05D004180 ORTHO05D005323 2.0e-06 56.6 52 59.6


User provided reference genes

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