Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 0.0e+00 2305.8 1302 100.0
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 0.0e+00 1633.6 1178 84.2
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 0.0e+00 1527.3 1359 68.5
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 0.0e+00 1472.6 1356 67.6
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 0.0e+00 1468.8 1356 67.4
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1450.3 1431 64.3
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 0.0e+00 1373.2 1356 62.5
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 0.0e+00 1345.9 1405 59.7
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 0.0e+00 1336.6 1370 61.2
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 0.0e+00 1334.3 1405 61.1
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 0.0e+00 1325.1 1400 60.1
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 0.0e+00 1320.8 1396 60.8
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 0.0e+00 1313.9 1400 60.2
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 0.0e+00 1305.0 1351 61.2
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 0.0e+00 1299.6 1369 61.3
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 0.0e+00 1288.9 1393 59.2
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 0.0e+00 1280.4 1359 57.5
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 0.0e+00 1279.6 1375 58.0
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 0.0e+00 1276.2 1401 58.6
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 0.0e+00 1274.6 1394 59.0
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 0.0e+00 1268.1 1457 56.0
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 0.0e+00 1265.8 1371 59.5
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 0.0e+00 1264.2 1381 60.7
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 0.0e+00 1256.1 1354 59.6
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 0.0e+00 1249.2 1359 59.3
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 0.0e+00 1242.3 1304 60.0
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 0.0e+00 1241.9 1355 58.7
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 0.0e+00 1239.9 1354 56.9
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 0.0e+00 1230.7 1369 57.9
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 0.0e+00 1228.4 1370 59.0
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 0.0e+00 1224.5 1380 59.1
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 0.0e+00 1219.1 1215 62.1
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 0.0e+00 1216.4 1401 58.0
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 0.0e+00 1216.4 1422 60.7
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 0.0e+00 1211.4 1398 58.5
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 0.0e+00 1206.8 1391 58.9
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 0.0e+00 1198.3 1417 57.2
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 0.0e+00 1190.3 1361 56.5
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 0.0e+00 1178.3 1436 56.1
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 0.0e+00 1177.9 1349 55.3
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 0.0e+00 1169.5 1335 55.5
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 0.0e+00 1169.1 1339 55.2
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 0.0e+00 1168.7 1393 57.4
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 0.0e+00 1164.1 1372 55.5
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 0.0e+00 1163.7 1412 56.7
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 0.0e+00 1157.1 1357 54.3
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 0.0e+00 1156.4 1345 57.2
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 0.0e+00 1155.6 1398 57.0
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 0.0e+00 1149.0 1165 60.7
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 0.0e+00 1143.6 1483 53.9
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 0.0e+00 1142.5 1357 54.9
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 0.0e+00 1139.8 1376 53.9
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 0.0e+00 1139.0 1375 53.7
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 0.0e+00 1132.1 1340 54.8
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 0.0e+00 1131.3 1314 58.5
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 0.0e+00 1127.5 1372 57.2
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 0.0e+00 1119.4 1195 55.6
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 0.0e+00 1117.1 1358 53.3
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 0.0e+00 1116.3 1361 53.6
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 0.0e+00 1112.8 1393 53.0
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 0.0e+00 1109.7 1359 55.4
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 0.0e+00 1108.6 1239 56.3
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 0.0e+00 1105.1 1030 61.4
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 0.0e+00 1098.6 1340 53.7
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 0.0e+00 1098.6 1371 52.7
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 0.0e+00 1088.2 1384 53.0
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 0.0e+00 1085.9 1363 52.1
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 0.0e+00 1083.9 1368 51.7
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 4.5e-311 1071.6 1285 53.0
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 1.1e-310 1070.5 1341 53.1
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 4.2e-304 1048.5 1397 50.5
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 2.8e-300 1035.8 1371 54.2
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 3.5e-298 1028.9 1233 54.3
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 1.3e-297 1026.9 1225 55.8
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 2.9e-297 1025.8 896 62.3
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 1.0e-294 1017.3 1347 50.0
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 1.2e-293 1013.8 942 60.3
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 1.1e-280 970.7 1378 50.2
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 2.3e-278 963.0 1386 49.4
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 2.3e-278 963.0 1435 45.5
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 3.4e-277 959.1 1353 52.2
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 3.7e-276 955.7 1419 46.4
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 1.4e-275 953.7 1378 49.3
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.9e-275 953.4 1367 48.5
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 2.3e-273 946.4 1407 48.5
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 1.2e-271 940.6 1400 46.1
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 1.1e-270 937.6 1413 45.5
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 6.8e-270 934.9 1361 51.8
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 1.7e-268 930.2 1345 50.9
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 1.3e-265 920.6 1479 47.2
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.1e-264 917.5 1010 60.0
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 3.3e-264 916.0 1419 45.1
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 9.5e-264 914.4 1395 50.8
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 6.2e-263 911.8 1495 46.6
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 1.5e-261 907.1 1419 45.0
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 1.5e-261 907.1 1383 45.3
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 3.4e-261 906.0 1375 45.4
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 3.4e-261 906.0 1375 45.4
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 5.8e-261 905.2 1377 45.5
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 7.6e-261 904.8 942 56.9
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.9e-259 900.2 1060 58.7
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 3.2e-259 899.4 1372 45.2
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 3.5e-258 896.0 1353 48.1
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 3.0e-257 892.9 1390 44.2
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 8.1e-255 884.8 1373 46.5
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 1.4e-251 874.0 1172 47.0
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 6.6e-249 865.1 1346 45.1
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 8.7e-249 864.8 1307 45.6
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 9.0e-246 854.7 782 62.3
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 4.8e-239 832.4 1126 49.6
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 2.7e-218 763.5 1194 45.6
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 8.7e-217 758.4 920 51.5
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 2.0e-213 747.3 1334 41.5
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 1.3e-207 728.0 1001 47.4
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 3.2e-203 713.4 789 54.4
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 2.6e-197 693.7 1335 41.8
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 3.5e-189 666.8 1390 41.1
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 2.0e-181 641.0 539 65.9
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 8.9e-169 599.0 1220 37.7
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 5.4e-166 589.7 1202 42.0
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 9.2e-150 535.8 1239 40.1
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 4.6e-149 533.5 1291 36.0
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 3.9e-148 530.4 907 48.3
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 7.6e-144 516.2 1236 36.7
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 5.3e-129 466.8 312 76.3
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 4.5e-128 463.8 1387 33.4
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 3.3e-123 447.6 1390 34.0
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 4.8e-114 417.2 1380 32.5
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 8.2e-106 389.8 480 48.3
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 5.3e-97 360.5 1184 31.8
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 9.1e-97 359.8 1386 31.5
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 1.8e-89 335.5 497 44.7
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 3.0e-84 318.2 403 46.9
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 2.9e-71 275.0 1288 29.7
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 8.8e-68 263.5 986 29.6
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 2.0e-67 262.3 452 44.9
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 4.8e-66 257.7 374 47.3
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 7.0e-65 253.8 200 66.0
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 5.0e-63 247.7 864 28.2
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 2.8e-61 241.9 902 27.9
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 1.8e-60 239.2 915 28.5
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 3.0e-60 238.4 1108 26.8
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 4.1e-57 228.0 318 42.8
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 3.5e-56 224.9 213 58.2
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 1.1e-54 219.9 312 42.0
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 5.6e-54 217.6 610 32.0
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 1.2e-53 216.5 309 42.1
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 6.4e-50 204.1 590 44.2
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 1.0e-47 196.8 918 27.2
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 5.0e-47 194.5 232 51.7
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 9.5e-46 190.3 905 27.7
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 9.5e-46 190.3 251 44.2
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 5.2e-44 184.5 1001 25.5
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 5.4e-41 174.5 164 56.7
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 4.3e-38 164.9 695 26.9
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 3.6e-37 161.8 517 31.3
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.8e-36 159.5 850 26.2
Nitab4.5_0006425g0080 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.3e-34 153.3 385 40.0
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 2.9e-34 152.1 984 24.4
Oeu013447.1 Olea europaea HOM05D001849 ORTHO05D004075 2.4e-33 149.1 174 51.7
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.9e-30 139.4 1007 23.3
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 8.1e-29 134.0 898 24.1
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.4e-28 133.3 1079 24.0
Oeu011104.1 Olea europaea HOM05D001849 ORTHO05D004075 5.2e-28 131.3 195 62.1
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 9.9e-27 127.1 84 66.7
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 1.3e-23 116.7 882 22.7
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 7.3e-22 110.9 124 54.8
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 1.2e-21 110.2 170 34.7
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 1.2e-21 110.2 129 46.5
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 3.1e-20 105.5 143 44.1
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 5.2e-20 104.8 88 56.8
MBI19_g29884_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 9.9e-19 100.5 121 55.4
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 2.2e-18 99.4 90 55.6
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 1.8e-12 79.7 86 46.5
Atru.chr11.323 Acer truncatum HOM05D001849 ORTHO05D004075 1.5e-11 76.6 528 26.7
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 9.3e-09 67.4 69 53.6
SEGI_04298 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.6e-08 66.6 129 37.2
Medtr3g035000 Medicago truncatula HOM05D000079 ORTHO05D004075 3.0e-07 62.4 52 50.0
BcaC02g11963 Brassica carinata HOM05D001675 ORTHO05D021664 1.9e-06 59.7 73 46.6
Nitab4.5_0004322g0030 Nicotiana tabacum HOM05D001849 ORTHO05D004075 5.6e-06 58.2 39 61.5


User provided reference genes

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