Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34667 Davidia involucrata HOM05D000728 ORTHO05D001586 2.3e-129 465.7 258 100.0
CSS0031500 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 5.5e-22 109.0 144 47.9
Hma1.2p1_0273F.1_g109260 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 8.0e-21 105.1 111 57.7
Lj1C73G4 Lonicera japonica HOM05D000728 ORTHO05D001586 1.4e-20 104.4 125 54.4
TAR365G0137 Trochodendron aralioides HOM05D000728 ORTHO05D001586 1.4e-20 104.4 166 47.0
vmacro02707 Vaccinium macrocarpon HOM05D000728 ORTHO05D001586 6.3e-18 95.5 128 48.4
CiPaw.03G270100 Carya illinoinensis HOM05D000728 ORTHO05D001586 1.1e-17 94.7 115 49.6
Hund05480 Selenicereus undatus HOM05D000728 ORTHO05D001586 1.4e-17 94.4 129 50.4
CSS0045777 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.8e-17 94.0 135 46.7
Actinidia09520 Actinidia chinensis HOM05D000728 ORTHO05D001586 9.1e-17 91.7 114 50.9
Hma1.2p1_1702F.1_g298300 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 2.7e-16 90.1 87 60.9
Cc01_g17870 Coffea canephora HOM05D000728 ORTHO05D001586 1.2e-13 81.3 116 54.3
CAN.G1487.2 Capsicum annuum HOM05D000728 ORTHO05D001586 1.6e-13 80.9 109 50.5
Atru.chr5.1823 Acer truncatum HOM05D000728 ORTHO05D001586 3.6e-13 79.7 122 47.5
Haze_24694 Corylus avellana HOM05D000728 ORTHO05D001586 3.6e-13 79.7 125 44.8
Migut.N02227 Erythranthe guttata HOM05D000728 ORTHO05D001586 4.7e-13 79.3 137 42.3
Hund18282 Selenicereus undatus HOM05D000728 ORTHO05D001586 8.0e-13 78.6 127 47.2
EL10Ac7g17673 Beta vulgaris HOM05D000728 ORTHO05D001586 1.0e-12 78.2 131 46.6
Ciclev10018896m.g Citrus clementina HOM05D000728 ORTHO05D001586 1.4e-12 77.8 127 44.1
Lj2C1143T10 Lonicera japonica HOM05D000728 ORTHO05D001586 1.4e-12 77.8 97 53.6
Rhsim13G0039700 Rhododendron simsii HOM05D000728 ORTHO05D001586 1.4e-12 77.8 115 46.1
Cc01_g17860 Coffea canephora HOM05D000728 ORTHO05D001586 2.3e-12 77.0 130 43.8
Nitab4.5_0000845g0130 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.3e-12 77.0 104 50.0
Nitab4.5_0003342g0010 Nicotiana tabacum HOM05D000728 ORTHO05D001586 4.0e-12 76.3 103 50.5
CiPaw.04G190100 Carya illinoinensis HOM05D000728 ORTHO05D001586 5.2e-12 75.9 78 53.8
Sc17g0002720 Simmondsia chinensis HOM05D000728 ORTHO05D001586 6.8e-12 75.5 131 44.3
Sopen09g028690 Solanum pennellii HOM05D000728 ORTHO05D001586 6.8e-12 75.5 135 40.7
Solyc09g072890.2 Solanum lycopersicum HOM05D000728 ORTHO05D001586 8.8e-12 75.1 137 42.3
Sopen09g028710 Solanum pennellii HOM05D000728 ORTHO05D001586 8.8e-12 75.1 137 42.3
AUR62008788 Chenopodium quinoa HOM05D000728 ORTHO05D001586 2.0e-11 73.9 132 43.9
Nitab4.5_0002538g0040 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.0e-11 73.9 136 44.9
Nitab4.5_0003167g0090 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.0e-11 73.9 136 45.6
DCAR_012580 Daucus carota HOM05D000728 ORTHO05D001586 3.4e-11 73.2 107 47.7
Lsat_1_v5_gn_9_11421 Lactuca sativa HOM05D000728 ORTHO05D001586 4.4e-11 72.8 138 42.0
Manes.12G036100 Manihot esculenta HOM05D000728 ORTHO05D001586 7.5e-11 72.0 109 43.1
SGA_v2.0_scaffold1G00645 Striga asiatica HOM05D000728 ORTHO05D001586 7.5e-11 72.0 139 41.0
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 9.8e-11 71.6 126 40.5
Eucgr.K01433 Eucalyptus grandis HOM05D000728 ORTHO05D001586 2.8e-10 70.1 129 42.6
ECA247G3020 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.1e-09 68.2 120 42.5
MSTRG.12519 Avicennia marina HOM05D000728 ORTHO05D001586 1.4e-09 67.8 141 41.1
DCAR_004684 Daucus carota HOM05D000728 ORTHO05D001586 7.0e-09 65.5 132 40.2
ClCG06G001460 Citrullus lanatus HOM05D000728 ORTHO05D001586 1.2e-08 64.7 105 44.8
Gohir.A08G191866 Gossypium hirsutum HOM05D000728 ORTHO05D001586 1.2e-08 64.7 102 43.1
Peaxi162Scf00043g02925 Petunia axillaris HOM05D000728 ORTHO05D001586 1.2e-08 64.7 112 46.4
Thecc.01G251600 Theobroma cacao HOM05D000728 ORTHO05D001586 1.6e-08 64.3 134 40.3
CsaV3_6G007420 Cucumis sativus L. HOM05D000728 ORTHO05D001586 7.7e-08 62.0 105 43.8
Duzib138G0819 Durio zibethinus HOM05D000728 ORTHO05D001586 7.7e-08 62.0 93 47.3
Manes.13G040300 Manihot esculenta HOM05D000728 ORTHO05D001586 7.7e-08 62.0 91 46.2
Cpa.g.sc87.19 Carica papaya HOM05D000728 ORTHO05D001586 1.0e-07 61.6 69 52.2
Gohir.D08G209900 Gossypium hirsutum HOM05D000728 ORTHO05D001586 1.0e-07 61.6 116 40.5
CAN.G771.39 Capsicum annuum HOM05D000728 ORTHO05D001586 1.3e-07 61.2 128 38.3
Lsat_1_v5_gn_8_92080 Lactuca sativa HOM05D000728 ORTHO05D001586 1.3e-07 61.2 88 47.7
RcHm_v2.0_Chr6g0286831 Rosa chinensis HOM05D000728 ORTHO05D001586 1.3e-07 61.2 149 35.6
AUR62025455 Chenopodium quinoa HOM05D000728 ORTHO05D001586 1.7e-07 60.8 132 41.7
Peaxi162Scf00517g00031 Petunia axillaris HOM05D000728 ORTHO05D001586 1.7e-07 60.8 137 40.1
TAR633G1057 Trochodendron aralioides HOM05D000728 ORTHO05D001586 2.2e-07 60.5 86 48.8
MSTRG.18349 Avicennia marina HOM05D000728 ORTHO05D001586 3.8e-07 59.7 128 42.2
Duzib211G0287 Durio zibethinus HOM05D000728 ORTHO05D001586 3.8e-07 59.7 91 44.0
Cpa.g.sc165.20 Carica papaya HOM05D001174 ORTHO05D001586 5.0e-07 59.3 99 42.4
TWI12G1257 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 5.0e-07 59.3 138 37.0
GSVIVG01028411001 Vitis vinifera HOM05D000728 ORTHO05D001586 5.0e-07 59.3 130 34.6
Ca_09651_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 6.5e-07 58.9 115 35.7
Ah.08g218230 Amaranthus hybridus HOM05D000728 ORTHO05D001586 8.5e-07 58.5 129 38.8
Lalb_Chr06g0170701 Lupinus albus HOM05D000728 ORTHO05D001586 1.1e-06 58.2 115 38.3
VMungo1383G1125 Vigna mungo HOM05D000728 ORTHO05D001586 1.1e-06 58.2 105 40.0
HanXRQChr15g0468241 Helianthus annuus HOM05D000728 ORTHO05D001586 1.5e-06 57.8 120 39.2
Gorai.004G222200 Gossypium raimondii HOM05D000728 ORTHO05D001586 1.9e-06 57.4 102 40.2
MELO3C022387.2 Cucumis melo HOM05D000728 ORTHO05D001586 3.2e-06 56.6 134 36.6
Oeu028901.1 Olea europaea HOM05D000728 ORTHO05D001586 3.2e-06 56.6 129 38.0
FAN15G3455 Fragaria x ananassa HOM05D000728 ORTHO05D001586 4.2e-06 56.2 147 33.3
Gohir.D11G139300 Gossypium hirsutum HOM05D000728 ORTHO05D001586 4.2e-06 56.2 107 46.7
Gorai.007G149600 Gossypium raimondii HOM05D000728 ORTHO05D001586 4.2e-06 56.2 107 46.7
Sopen06g035170 Solanum pennellii HOM05D000728 ORTHO05D001586 5.5e-06 55.8 128 39.1
Oeu039654.1 Olea europaea HOM05D000728 ORTHO05D001586 7.2e-06 55.5 129 37.2
Sed0009313 Sechium edule HOM05D000728 ORTHO05D001586 7.2e-06 55.5 127 35.4
FAN27G1521 Fragaria x ananassa HOM05D000728 ORTHO05D001586 9.4e-06 55.1 148 34.5
Potri.002G257400 Populus trichocarpa HOM05D000728 ORTHO05D001586 9.4e-06 55.1 114 42.1


User provided reference genes

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