Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31781 Davidia involucrata HOM05D001978 ORTHO05D003036 1.1e-60 236.5 119 100.0
Dinv15066 Davidia involucrata HOM05D001978 ORTHO05D003036 3.1e-52 208.4 107 99.1
Dinv02869 Davidia involucrata HOM05D001978 ORTHO05D003036 2.8e-45 185.3 96 100.0
Dinv43400 Davidia involucrata HOM05D001978 ORTHO05D003036 4.0e-44 181.4 105 87.6
Dinv07789 Davidia involucrata HOM05D001978 ORTHO05D003036 5.3e-44 181.0 112 86.6
Dinv37732 Davidia involucrata HOM05D001978 ORTHO05D003036 2.6e-43 178.7 97 95.9
CSS0022031 Camellia sinensis var. sinensis HOM05D001978 ORTHO05D003036 2.2e-42 175.6 110 80.0
CSS0034960 Camellia sinensis var. sinensis HOM05D001978 ORTHO05D003036 7.1e-41 170.6 105 82.9
CsaV3_3G031890 Cucumis sativus L. HOM05D001978 ORTHO05D003036 7.1e-41 170.6 106 80.2
COL.COLO4_12328 Corchorus olitorius HOM05D001978 ORTHO05D003036 9.3e-41 170.2 110 78.2
Glyma.09G226400 Glycine max HOM05D001978 ORTHO05D003036 1.2e-40 169.9 106 80.2
Sed0016255 Sechium edule HOM05D001978 ORTHO05D003036 1.2e-40 169.9 106 79.2
Carub.0005s3007 Capsella rubella HOM05D001978 ORTHO05D003036 1.6e-40 169.5 105 81.9
ClCG10G012130 Citrullus lanatus HOM05D001978 ORTHO05D003036 1.6e-40 169.5 106 79.2
MELO3C024002.2 Cucumis melo HOM05D001978 ORTHO05D003036 1.6e-40 169.5 106 79.2
Actinidia21535 Actinidia chinensis HOM05D001978 ORTHO05D003036 2.1e-40 169.1 106 80.2
Thecc.01G404200 Theobroma cacao HOM05D001978 ORTHO05D003036 2.1e-40 169.1 110 78.2
Lj7C575G6 Lonicera japonica HOM05D001978 ORTHO05D003036 2.7e-40 168.7 105 80.0
Actinidia06286 Actinidia chinensis HOM05D001978 ORTHO05D003036 3.5e-40 168.3 111 78.4
Duzib138G1653 Durio zibethinus HOM05D001978 ORTHO05D003036 3.5e-40 168.3 110 77.3
AL5G46320 Arabidopsis lyrata HOM05D001978 ORTHO05D003036 6.0e-40 167.5 105 81.0
Cpa.g.sc125.58 Carica papaya HOM05D001978 ORTHO05D003036 7.9e-40 167.2 110 76.4
VMungo1127G0961 Vigna mungo HOM05D001978 ORTHO05D003036 7.9e-40 167.2 106 80.2
Thhalv10005758m.g Eutrema salsugineum HOM05D001978 ORTHO05D003036 1.3e-39 166.4 105 81.0
Psat7g158440 Pisum sativum HOM05D001978 ORTHO05D003036 1.3e-39 166.4 106 79.2
Sp5g00090 Schrenkiella parvula HOM05D001978 ORTHO05D003036 1.3e-39 166.4 105 81.0
AT3G63460 Arabidopsis thaliana HOM05D001978 ORTHO05D003036 1.8e-39 166.0 105 80.0
Duzib268G1826 Durio zibethinus HOM05D001978 ORTHO05D003036 1.8e-39 166.0 110 74.5
Phvul.011G010400 Phaseolus vulgaris HOM05D001978 ORTHO05D003036 1.8e-39 166.0 106 78.3
TAR369G0424 Trochodendron aralioides HOM05D001978 ORTHO05D003036 1.8e-39 166.0 106 78.3
CARHR291510 Cardamine hirsuta HOM05D001978 ORTHO05D003036 2.3e-39 165.6 105 80.0
Lj3g0007867 Lotus japonicus HOM05D001978 ORTHO05D003036 2.3e-39 165.6 106 80.2
Gohir.A08G141300 Gossypium hirsutum HOM05D001978 ORTHO05D003036 3.0e-39 165.2 106 78.3
THA.LOC104823030 Tarenaya hassleriana HOM05D001978 ORTHO05D003036 3.0e-39 165.2 106 80.2
BraA09t40921Z Brassica rapa HOM05D001978 ORTHO05D003036 5.1e-39 164.5 105 81.0
Duzib133G0356 Durio zibethinus HOM05D001978 ORTHO05D003036 5.1e-39 164.5 106 77.4
MBI13_g11939_MAGBIO Magnolia biondii HOM05D001978 ORTHO05D003036 5.1e-39 164.5 106 78.3
TPR.G8347 Trifolium pratense HOM05D001978 ORTHO05D003036 5.1e-39 164.5 106 79.2
TWI09G1049 Tripterygium wilfordii HOM05D001978 ORTHO05D003036 5.1e-39 164.5 110 75.5
Gohir.D08G162400 Gossypium hirsutum HOM05D001978 ORTHO05D003036 6.7e-39 164.1 106 77.4
Gorai.004G168700 Gossypium raimondii HOM05D001978 ORTHO05D003036 6.7e-39 164.1 106 77.4
TWI73G0465 Tripterygium wilfordii HOM05D001978 ORTHO05D003036 6.7e-39 164.1 110 75.5
TAR633G0096 Trochodendron aralioides HOM05D001978 ORTHO05D003036 6.7e-39 164.1 106 77.4
TAR633G1125 Trochodendron aralioides HOM05D001978 ORTHO05D003036 6.7e-39 164.1 106 76.4
Gohir.D11G078201 Gossypium hirsutum HOM05D001978 ORTHO05D003036 8.7e-39 163.7 105 80.0
TWI53G0392 Tripterygium wilfordii HOM05D001978 ORTHO05D003036 8.7e-39 163.7 110 74.5
BcaC07g40813 Brassica carinata HOM05D001978 ORTHO05D003036 1.1e-38 163.3 105 80.0
BolC8t51381H Brassica oleracea HOM05D001978 ORTHO05D003036 1.1e-38 163.3 105 80.0
BraA09t40920Z Brassica rapa HOM05D001978 ORTHO05D003036 1.1e-38 163.3 105 80.0
Ca_26319_v3 Cicer arietinum L. HOM05D001978 ORTHO05D003036 1.1e-38 163.3 110 75.5
Ca_29948_v3 Cicer arietinum L. HOM05D001978 ORTHO05D003036 1.1e-38 163.3 110 75.5
Gorai.007G083600 Gossypium raimondii HOM05D001978 ORTHO05D003036 1.1e-38 163.3 105 80.0
Lalb_Chr19g0140221 Lupinus albus HOM05D001978 ORTHO05D003036 1.1e-38 163.3 106 78.3
Medtr4g045577 Medicago truncatula HOM05D001978 ORTHO05D003036 1.1e-38 163.3 106 77.4
Sed0014499 Sechium edule HOM05D001978 ORTHO05D003036 1.5e-38 162.9 106 76.4
Atru.chr11.2543 Acer truncatum HOM05D001978 ORTHO05D003036 1.9e-38 162.5 106 76.4
C04p29860 Brassica napus HOM05D001978 ORTHO05D003036 1.9e-38 162.5 104 78.8
BolC4t24517H Brassica oleracea HOM05D001978 ORTHO05D003036 1.9e-38 162.5 104 78.8
Manes.10G135100 Manihot esculenta HOM05D001978 ORTHO05D003036 1.9e-38 162.5 106 76.4
Hma1.2p1_0685F.1_g203310 Hydrangea macrophylla HOM05D001978 ORTHO05D003036 2.5e-38 162.2 105 78.1
A09p55130 Brassica napus HOM05D001978 ORTHO05D003036 3.3e-38 161.8 105 79.0
vmacro13704 Vaccinium macrocarpon HOM05D001978 ORTHO05D003036 3.3e-38 161.8 106 77.4
Gohir.A08G055600 Gossypium hirsutum HOM05D001978 ORTHO05D003036 4.3e-38 161.4 106 75.5
Gohir.D08G064900 Gossypium hirsutum HOM05D001978 ORTHO05D003036 4.3e-38 161.4 106 75.5
Gorai.004G067200 Gossypium raimondii HOM05D001978 ORTHO05D003036 4.3e-38 161.4 106 75.5
BcaB02g08058 Brassica carinata HOM05D001978 ORTHO05D003036 5.6e-38 161.0 104 77.9
Eucgr.G03281 Eucalyptus grandis HOM05D001978 ORTHO05D003036 5.6e-38 161.0 106 76.4
MBI19_g16674_MAGBIO Magnolia biondii HOM05D001978 ORTHO05D003036 5.6e-38 161.0 105 78.1
Lalb_Chr01g0000521 Lupinus albus HOM05D001978 ORTHO05D003036 7.4e-38 160.6 106 77.4
arahy.Tifrunner.gnm1.ann1.18AW2L Arachis hypogaea HOM05D001978 ORTHO05D003036 9.6e-38 160.2 106 76.4
arahy.Tifrunner.gnm1.ann1.T8W0FC Arachis hypogaea HOM05D001978 ORTHO05D003036 9.6e-38 160.2 106 76.4
Lalb_Chr03g0024131 Lupinus albus HOM05D001978 ORTHO05D003036 1.3e-37 159.8 106 74.5
Aa31LG10G17320 Aethionema arabicum HOM05D001978 ORTHO05D003036 1.6e-37 159.5 105 77.1
Rhsim07G0059400 Rhododendron simsii HOM05D001978 ORTHO05D003036 2.1e-37 159.1 106 73.6
AUR62009426 Chenopodium quinoa HOM05D001978 ORTHO05D003036 2.8e-37 158.7 110 70.9
Gohir.D12G103000 Gossypium hirsutum HOM05D001978 ORTHO05D003036 3.7e-37 158.3 105 77.1
Manes.07G011900 Manihot esculenta HOM05D001978 ORTHO05D003036 3.7e-37 158.3 106 74.5
Hund16631 Selenicereus undatus HOM05D001978 ORTHO05D003036 3.7e-37 158.3 110 70.9
THA.LOC104801971 Tarenaya hassleriana HOM05D001978 ORTHO05D003036 3.7e-37 158.3 106 76.4
Cfa022633 Carpinus fangiana HOM05D001978 ORTHO05D003036 4.8e-37 157.9 108 75.9
Haze_03128 Corylus avellana HOM05D001978 ORTHO05D003036 4.8e-37 157.9 108 75.9
Haze_03129 Corylus avellana HOM05D001978 ORTHO05D003036 4.8e-37 157.9 108 75.9
Prupe.2G024600 Prunus persica HOM05D001978 ORTHO05D003036 8.1e-37 157.1 107 75.7
BcaC08g45262 Brassica carinata HOM05D001978 ORTHO05D003036 1.4e-36 156.4 104 76.0
A07p26260 Brassica napus HOM05D001978 ORTHO05D003036 1.4e-36 156.4 104 76.0
C06p28640 Brassica napus HOM05D001978 ORTHO05D003036 1.4e-36 156.4 104 76.0
BolC6t38032H Brassica oleracea HOM05D001978 ORTHO05D003036 1.4e-36 156.4 104 76.0
BraA07t30269Z Brassica rapa HOM05D001978 ORTHO05D003036 1.4e-36 156.4 104 76.0
FvH4_7g01850 Fragaria vesca HOM05D001978 ORTHO05D003036 1.4e-36 156.4 108 75.0
FAN03G2968 Fragaria x ananassa HOM05D001978 ORTHO05D003036 1.4e-36 156.4 108 75.0
FAN06G2210 Fragaria x ananassa HOM05D001978 ORTHO05D003036 1.4e-36 156.4 108 75.0
FAN10G1732 Fragaria x ananassa HOM05D001978 ORTHO05D003036 1.4e-36 156.4 108 75.0
Gorai.008G112200 Gossypium raimondii HOM05D001978 ORTHO05D003036 1.4e-36 156.4 105 76.2
RcHm_v2.0_Chr1g0318481 Rosa chinensis HOM05D001978 ORTHO05D003036 1.4e-36 156.4 108 75.0
FAN01G0983 Fragaria x ananassa HOM05D001978 ORTHO05D003036 2.4e-36 155.6 108 75.0
Rhsim01G0124800 Rhododendron simsii HOM05D001978 ORTHO05D003036 2.4e-36 155.6 112 72.3
Sabra09G0040500 Salix brachista HOM05D001978 ORTHO05D003036 2.4e-36 155.6 105 75.2
Potri.009G055400 Populus trichocarpa HOM05D001978 ORTHO05D003036 3.1e-36 155.2 105 75.2
MD02G1300000 Malus domestica HOM05D001978 ORTHO05D003036 4.0e-36 154.8 107 74.8
CANSAT80G0138 Cannabis sativa HOM05D001978 ORTHO05D003036 5.3e-36 154.5 106 76.4
Dinv01996 Davidia involucrata HOM05D001978 ORTHO05D003036 5.3e-36 154.5 81 95.1
HanXRQChr16g0524831 Helianthus annuus HOM05D001978 ORTHO05D003036 5.3e-36 154.5 105 76.2
PGR031G1837 Punica granatum HOM05D001978 ORTHO05D003036 5.3e-36 154.5 106 70.8
Ah.10g038540 Amaranthus hybridus HOM05D001978 ORTHO05D003036 9.0e-36 153.7 106 68.9
Nn7g36348 Nelumbo nucifera HOM05D001978 ORTHO05D003036 9.0e-36 153.7 106 72.6
Sabra16G0159500 Salix brachista HOM05D001978 ORTHO05D003036 9.0e-36 153.7 110 70.9
TAR636G2630 Trochodendron aralioides HOM05D001978 ORTHO05D003036 1.2e-35 153.3 106 75.5
Lj9A642T48 Lonicera japonica HOM05D001978 ORTHO05D003036 2.0e-35 152.5 105 72.4
CDE09G0202 Ceratophyllum demersum HOM05D001978 ORTHO05D003036 2.6e-35 152.1 105 74.3
MD07G1024900 Malus domestica HOM05D001978 ORTHO05D003036 3.4e-35 151.8 107 72.9
Potri.001G260900 Populus trichocarpa HOM05D001978 ORTHO05D003036 3.4e-35 151.8 110 71.8
CDE02G0774 Ceratophyllum demersum HOM05D001978 ORTHO05D003036 5.8e-35 151.0 105 73.3
CiPaw.14G004000 Carya illinoinensis HOM05D001978 ORTHO05D003036 7.6e-35 150.6 108 75.0
Aqoxy2G04178 Aquilegia oxysepala HOM05D001978 ORTHO05D003036 1.0e-34 150.2 106 70.8
QL04p010499 Quercus lobata HOM05D001978 ORTHO05D003036 1.0e-34 150.2 110 68.2
ECA234G3788 Erigeron canadensis HOM05D001978 ORTHO05D003036 2.9e-34 148.7 105 74.3
Ah.16g100700 Amaranthus hybridus HOM05D001978 ORTHO05D003036 3.8e-34 148.3 106 67.0
EL10Ac2g04382 Beta vulgaris HOM05D001978 ORTHO05D003036 6.5e-34 147.5 105 67.6
Nn2g15171 Nelumbo nucifera HOM05D001978 ORTHO05D003036 6.5e-34 147.5 106 70.8
Sc11g0009020 Simmondsia chinensis HOM05D001978 ORTHO05D003036 1.4e-33 146.4 105 68.6
Lsat_1_v5_gn_1_101701 Lactuca sativa HOM05D001978 ORTHO05D003036 5.5e-33 144.4 105 71.4
Sc14g0004930 Simmondsia chinensis HOM05D001978 ORTHO05D003036 7.1e-33 144.1 105 71.4
Oeu014599.1 Olea europaea HOM05D001978 ORTHO05D003036 9.3e-33 143.7 102 69.6
HPP92_001386 Vanilla planifolia HOM05D001978 ORTHO05D003036 1.6e-32 142.9 105 70.5
CAN.G909.18 Capsicum annuum HOM05D001978 ORTHO05D003036 2.7e-32 142.1 105 69.5
Solyc01g088020.3 Solanum lycopersicum HOM05D001978 ORTHO05D003036 2.7e-32 142.1 105 68.6
A08p30170 Brassica napus HOM05D001978 ORTHO05D003036 3.5e-32 141.7 106 67.0
ECA236G3334 Erigeron canadensis HOM05D001978 ORTHO05D003036 7.9e-32 140.6 104 69.2
HanXRQChr06g0183381 Helianthus annuus HOM05D001978 ORTHO05D003036 1.0e-31 140.2 104 71.2
SGA_v2.0_scaffold5G02944 Striga asiatica HOM05D001978 ORTHO05D003036 1.0e-31 140.2 103 66.0
HanXRQChr01g0015661 Helianthus annuus HOM05D001978 ORTHO05D003036 1.3e-31 139.8 105 69.5
Nitab4.5_0002888g0010 Nicotiana tabacum HOM05D001978 ORTHO05D003036 1.3e-31 139.8 105 70.5
Nitab4.5_0006695g0020 Nicotiana tabacum HOM05D001978 ORTHO05D003036 1.3e-31 139.8 105 70.5
SGA_v2.0_scaffold119G32768 Striga asiatica HOM05D001978 ORTHO05D003036 1.3e-31 139.8 103 68.9
C08p18950 Brassica napus HOM05D001978 ORTHO05D003036 3.0e-31 138.7 114 61.4
SGA_v2.0_scaffold4G02473 Striga asiatica HOM05D001978 ORTHO05D003036 3.0e-31 138.7 102 69.6
MSTRG.17003 Avicennia marina HOM05D001978 ORTHO05D003036 3.9e-31 138.3 102 68.6
Peaxi162Scf01108g00213 Petunia axillaris HOM05D001978 ORTHO05D003036 3.9e-31 138.3 105 67.6
ATR0057G085 Amborella trichopoda HOM05D001978 ORTHO05D003036 5.1e-31 137.9 105 68.6
BcaC07g38951 Brassica carinata HOM05D001978 ORTHO05D003036 6.7e-31 137.5 106 65.1
BolC8t49521H Brassica oleracea HOM05D001978 ORTHO05D003036 6.7e-31 137.5 106 65.1
DCAR_022370 Daucus carota HOM05D001978 ORTHO05D003036 1.5e-30 136.3 105 65.7
Migut.B01256 Erythranthe guttata HOM05D001978 ORTHO05D003036 1.9e-30 136.0 102 66.7
SalBow5G1268 Salvia bowleyana HOM05D001978 ORTHO05D003036 2.5e-30 135.6 102 67.6
SalBow5G4104 Salvia bowleyana HOM05D001978 ORTHO05D003036 2.5e-30 135.6 102 67.6
BcaB03g12953 Brassica carinata HOM05D001978 ORTHO05D003036 7.4e-30 134.0 104 65.4
Sopen01g034910 Solanum pennellii HOM05D001978 ORTHO05D003036 9.6e-30 133.7 99 68.7
BraA08t34951Z Brassica rapa HOM05D001978 ORTHO05D003036 1.3e-29 133.3 106 64.2
SalBow6G2677 Salvia bowleyana HOM05D001978 ORTHO05D003036 1.6e-29 132.9 103 63.1
SalBow6G7160 Salvia bowleyana HOM05D001978 ORTHO05D003036 1.6e-29 132.9 103 63.1
AT1G18830 Arabidopsis thaliana HOM05D001978 ORTHO05D003036 6.2e-29 131.0 103 65.0
MSTRG.20555 Avicennia marina HOM05D001978 ORTHO05D003036 1.1e-28 130.2 102 65.7
GSVIVG01001441001 Vitis vinifera HOM05D001978 ORTHO05D003036 9.0e-28 127.1 84 75.0
Zm00001eb329590 Zea mays HOM05D001978 ORTHO05D003036 3.4e-27 125.2 106 58.5
Zm00001eb110650 Zea mays HOM05D001978 ORTHO05D003036 7.6e-27 124.0 106 56.6
Ciclev10030570m.g Citrus clementina HOM05D001978 ORTHO05D003036 1.3e-26 123.2 79 77.2
Os07g0657200 Oryza sativa ssp. japonica HOM05D001978 ORTHO05D003036 6.5e-26 120.9 106 54.7
Carub.0001s1846 Capsella rubella HOM05D001978 ORTHO05D003036 1.9e-25 119.4 101 62.4
Oeu006547.2 Olea europaea HOM05D001978 ORTHO05D003036 4.2e-25 118.2 84 69.0
ECA248G1610 Erigeron canadensis HOM05D001978 ORTHO05D003036 5.5e-25 117.9 100 65.0
Lsat_1_v5_gn_4_32040 Lactuca sativa HOM05D001978 ORTHO05D003036 1.6e-24 116.3 80 73.8
Cc00_g06050 Coffea canephora HOM05D001978 ORTHO05D003036 2.1e-24 115.9 79 72.2
PSO732G0135 Papaver somniferum HOM05D001978 ORTHO05D003036 2.1e-24 115.9 110 55.5
PSO675G4117 Papaver somniferum HOM05D001978 ORTHO05D003036 2.7e-24 115.5 110 55.5
DCAR_031813 Daucus carota HOM05D001978 ORTHO05D003036 1.8e-23 112.8 79 68.4
vmacro21141 Vaccinium macrocarpon HOM05D001978 ORTHO05D003036 2.3e-23 112.5 75 76.0
Mapoly0156s0008 Marchantia polymorpha HOM05D001978 ORTHO05D003036 2.5e-22 109.0 104 51.0
A09p55140 Brassica napus HOM05D001978 ORTHO05D003036 4.1e-20 101.7 63 79.4
AagrBONN_evm.TU.Sc2ySwM_117.496 Anthoceros agrestis HOM05D001978 ORTHO05D003036 6.9e-20 100.9 96 51.0
Pp3c2_17710 Physcomitrium patens HOM05D001978 ORTHO05D003036 9.0e-20 100.5 103 50.5
LjContig00095g0022524 Lotus japonicus HOM05D001978 ORTHO05D003036 1.2e-19 100.1 100 56.0
Pp3c1_29660 Physcomitrium patens HOM05D001978 ORTHO05D003036 1.5e-19 99.8 103 50.5
C08p38070 Brassica napus HOM05D001978 ORTHO05D003036 2.0e-19 99.4 63 76.2
CiPaw.13G008500 Carya illinoinensis HOM05D001978 ORTHO05D003036 1.3e-18 96.7 108 52.8
CBR_g4546 Chara braunii HOM05D001978 ORTHO05D003036 9.4e-17 90.5 102 43.1
COL.COLO4_18389 Corchorus olitorius HOM05D001978 ORTHO05D003036 3.6e-16 88.6 93 54.8
Cre12.g522450 Chlamydomonas reinhardtii HOM05D001978 ORTHO05D003036 1.0e-15 87.0 105 42.9
SMO347G0508 Selaginella moellendorffii HOM05D001978 ORTHO05D003036 3.9e-15 85.1 105 44.8
PRCOL_00000726 Prasinoderma coloniale HOM05D000924 ORTHO05D001209 2.4e-12 75.9 87 41.4
TPR.G35927 Trifolium pratense HOM05D001978 ORTHO05D003036 1.0e-10 70.5 61 57.4
TPR.G3036 Trifolium pratense HOM05D001978 ORTHO05D003036 1.7e-10 69.7 53 62.3
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 8.5e-10 67.4 52 61.5
MCO15G626 Micromonas commoda HOM05D001978 ORTHO05D003036 1.1e-09 67.0 80 41.2
Rhsim02G0169400 Rhododendron simsii HOM05D001978 ORTHO05D003036 1.4e-09 66.6 66 57.6
CARHR040110 Cardamine hirsuta HOM05D001978 ORTHO05D003036 2.1e-08 62.8 101 40.6
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.0e-07 60.5 46 67.4


User provided reference genes

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