Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.2e-308 1062.4 532 100.0
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 4.6e-297 1023.8 511 99.8
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 1.8e-232 809.3 511 78.3
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 2.0e-223 779.2 512 76.4
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 1.7e-222 776.2 511 77.9
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 3.7e-222 775.0 512 76.6
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 1.6e-217 759.6 515 74.2
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 2.7e-217 758.8 528 72.0
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 1.1e-215 753.4 514 74.5
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 5.3e-213 744.6 511 73.8
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 2.0e-207 726.1 515 71.5
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 9.7e-207 723.8 510 71.6
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 4.8e-206 721.5 511 71.4
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 6.3e-206 721.1 528 69.9
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 2.4e-205 719.2 512 71.5
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 9.1e-205 717.2 512 72.7
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 3.5e-204 715.3 515 70.1
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 4.5e-204 714.9 511 70.3
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 1.7e-203 713.0 511 70.6
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.2e-203 712.6 511 71.2
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 3.8e-203 711.8 512 69.5
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 6.5e-203 711.1 511 71.0
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 1.9e-202 709.5 513 70.0
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 4.2e-202 708.4 511 71.2
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 7.2e-202 707.6 511 71.8
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.7e-201 705.7 511 70.6
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 6.1e-201 704.5 512 69.7
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 8.0e-201 704.1 512 70.3
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 1.0e-200 703.7 511 70.5
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 1.4e-200 703.4 512 69.7
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 1.4e-200 703.4 511 69.5
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.8e-200 703.0 511 69.9
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 2.3e-200 702.6 514 70.0
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 8.8e-200 700.7 511 69.3
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 3.4e-199 698.7 511 69.9
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 9.8e-199 697.2 542 66.4
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 1.7e-198 696.4 511 69.7
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 1.7e-198 696.4 515 68.2
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 2.2e-198 696.0 513 68.0
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 2.4e-197 692.6 511 67.9
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 2.4e-197 692.6 554 65.5
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 3.1e-197 692.2 513 67.6
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 9.1e-197 690.6 514 69.5
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 1.6e-196 689.9 540 66.9
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 2.0e-196 689.5 512 67.6
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 2.7e-196 689.1 512 68.9
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 1.0e-195 687.2 513 67.3
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 1.3e-195 686.8 512 68.9
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 2.9e-195 685.6 511 69.1
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 2.5e-194 682.6 512 69.1
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 6.1e-193 677.9 513 67.8
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 3.0e-192 675.6 514 67.7
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 6.8e-192 674.5 512 68.2
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 6.8e-192 674.5 515 67.4
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 6.8e-192 674.5 516 67.6
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 1.2e-191 673.7 567 64.7
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 3.4e-191 672.2 514 66.5
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 9.8e-191 670.6 514 66.0
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 1.1e-189 667.2 512 68.2
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 1.8e-189 666.4 512 66.2
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 1.8e-189 666.4 608 59.7
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 7.0e-189 664.5 499 67.3
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 4.5e-188 661.8 517 66.7
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 4.5e-188 661.8 517 65.6
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 5.9e-188 661.4 514 65.6
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 1.0e-187 660.6 511 66.3
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 1.0e-187 660.6 514 66.0
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 6.6e-187 657.9 526 66.2
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 8.6e-187 657.5 494 68.4
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 1.9e-186 656.4 515 65.6
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 3.3e-186 655.6 528 63.4
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 2.3e-184 649.4 511 66.7
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.5e-183 646.7 532 64.1
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 2.0e-183 646.4 514 64.8
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 2.0e-183 646.4 514 64.8
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 2.6e-183 646.0 539 62.9
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 2.6e-183 646.0 514 65.0
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 6.4e-182 641.3 514 64.8
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 1.0e-179 634.0 389 79.2
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 8.3e-174 614.4 522 60.2
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 3.2e-173 612.5 462 67.3
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 5.4e-173 611.7 487 64.9
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 3.5e-172 609.0 511 61.3
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 3.0e-171 605.9 551 60.8
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 3.3e-170 602.4 450 69.1
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 6.2e-169 598.2 526 61.8
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 1.7e-166 590.1 461 65.3
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 8.3e-166 587.8 535 58.1
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 1.9e-165 586.6 479 65.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.3e-163 579.7 544 59.6
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 3.0e-163 579.3 511 62.0
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 8.6e-163 577.8 523 57.2
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 6.8e-160 568.2 451 64.3
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 1.4e-157 560.5 435 65.3
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 1.6e-156 557.0 366 74.9
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.8e-152 543.5 512 59.2
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.4e-144 516.5 500 58.4
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.9e-143 511.1 527 54.5
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 5.1e-139 498.8 401 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 1.3e-137 494.2 519 50.7
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 6.9e-136 488.4 271 84.1
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 6.0e-132 475.3 537 48.2
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 3.1e-128 463.0 275 78.9
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 1.4e-125 454.1 466 54.7
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 3.1e-120 436.4 495 51.5
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 1.6e-116 424.1 344 64.2
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 3.7e-113 412.9 346 59.0
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 3.2e-109 399.8 465 50.8
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 2.7e-108 396.7 320 59.1
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 2.4e-104 383.6 326 63.8
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.6e-100 369.8 217 77.4
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 6.8e-91 339.0 183 85.2
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.3e-89 334.7 270 62.6
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 1.1e-85 321.6 186 81.2
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 7.5e-82 308.9 371 50.1
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 3.1e-80 303.5 395 46.3
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 2.3e-75 287.3 524 36.5
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.3e-75 287.3 307 56.0
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.3e-75 287.3 332 43.7
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.8e-72 277.7 208 64.4
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 2.8e-68 263.8 312 42.6
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 5.8e-66 256.1 473 35.1
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 5.0e-62 243.0 140 80.0
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 5.0e-62 243.0 314 40.8
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 3.4e-58 230.3 248 55.2
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 1.1e-53 215.3 112 88.4
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 2.8e-52 210.7 244 50.8
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 1.4e-51 208.4 245 52.7
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.2e-50 205.3 254 51.2
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.4e-43 181.0 255 46.7
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 5.8e-42 176.4 357 33.1
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 3.9e-38 163.7 93 82.8
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 1.5e-37 161.8 369 27.4
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 2.4e-35 154.5 379 29.3
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 1.4e-32 145.2 123 56.9
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 3.9e-30 137.1 82 76.8
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 3.8e-25 120.6 101 61.4
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 3.7e-20 104.0 62 77.4
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 7.1e-16 89.7 193 32.1
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 4.3e-13 80.5 55 67.3
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.8e-12 77.8 59 59.3
PRCOL_00003580 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 4.6e-07 60.5 171 29.2
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 5.1e-06 57.0 45 60.0


User provided reference genes

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