Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 5.8e-71 270.8 137 100.0
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 1.4e-48 196.4 121 81.8
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 2.2e-46 189.1 123 79.7
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 7.2e-45 184.1 121 75.2
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 7.2e-45 184.1 121 75.2
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 1.8e-43 179.5 122 74.6
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 9.7e-42 173.7 117 72.6
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 1.3e-41 173.3 121 72.7
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.7e-41 172.9 116 75.0
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 8.2e-41 170.6 116 74.1
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 8.2e-41 170.6 116 73.3
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 1.1e-40 170.2 117 70.9
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 5.3e-40 167.9 121 69.4
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 6.9e-40 167.5 106 79.2
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.2e-39 166.8 123 70.7
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 1.2e-39 166.8 105 81.0
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 1.5e-39 166.4 123 68.3
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 1.5e-39 166.4 100 81.0
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 1.5e-39 166.4 100 81.0
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 2.0e-39 166.0 116 72.4
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 3.4e-39 165.2 117 73.5
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 3.4e-39 165.2 116 71.6
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 5.9e-39 164.5 117 71.8
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.0e-38 163.7 116 72.4
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 1.0e-38 163.7 119 69.7
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.3e-38 163.3 106 78.3
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 2.2e-38 162.5 117 71.8
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 2.2e-38 162.5 117 69.2
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 2.9e-38 162.2 115 69.6
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.9e-38 162.2 115 69.6
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.9e-38 162.2 115 69.6
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 2.9e-38 162.2 119 69.7
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 3.8e-38 161.8 115 69.6
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 5.0e-38 161.4 121 68.6
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 5.0e-38 161.4 121 66.9
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 6.5e-38 161.0 115 68.7
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 8.5e-38 160.6 122 68.9
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 8.5e-38 160.6 116 69.8
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.1e-37 160.2 121 66.1
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 1.4e-37 159.8 117 70.9
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 1.4e-37 159.8 119 68.9
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.4e-37 159.8 114 70.2
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.4e-37 159.8 110 72.7
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.9e-37 159.5 112 69.6
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 2.5e-37 159.1 110 72.7
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 3.2e-37 158.7 117 67.5
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 4.2e-37 158.3 119 65.5
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 4.2e-37 158.3 121 65.3
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 5.5e-37 157.9 119 66.4
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 7.2e-37 157.5 119 65.5
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 9.4e-37 157.1 123 70.7
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 2.1e-36 156.0 117 66.7
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 2.7e-36 155.6 120 65.8
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 4.7e-36 154.8 116 69.8
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 4.7e-36 154.8 121 66.1
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 1.4e-35 153.3 116 69.0
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 2.3e-35 152.5 145 59.3
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 2.3e-35 152.5 116 68.1
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 3.0e-35 152.1 116 69.0
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 6.7e-35 151.0 116 69.0
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 8.8e-35 150.6 116 68.1
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 1.1e-34 150.2 114 68.4
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 1.5e-34 149.8 108 73.1
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 2.0e-34 149.4 121 65.3
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 4.4e-34 148.3 111 72.1
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 4.4e-34 148.3 119 65.5
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.2e-33 146.0 121 64.5
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.2e-33 146.0 121 64.5
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 2.8e-33 145.6 103 71.8
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 2.8e-33 145.6 121 63.6
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.8e-33 145.6 110 69.1
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 3.7e-33 145.2 102 71.6
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 3.7e-33 145.2 102 71.6
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 6.3e-33 144.4 121 63.6
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 3.1e-32 142.1 110 67.3
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 3.1e-32 142.1 113 63.7
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 4.1e-32 141.7 102 68.6
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 4.1e-32 141.7 102 69.6
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 4.1e-32 141.7 102 69.6
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 5.3e-32 141.4 113 63.7
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 7.0e-32 141.0 102 69.6
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 9.1e-32 140.6 122 62.3
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 1.5e-31 139.8 108 70.4
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 2.6e-31 139.0 113 63.7
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 2.6e-31 139.0 113 63.7
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 3.5e-31 138.7 113 62.8
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.3e-30 136.7 119 63.0
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 2.2e-30 136.0 103 65.0
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 2.2e-30 136.0 115 60.0
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 3.2e-29 132.1 119 60.5
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 5.5e-29 131.3 113 61.1
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 2.1e-28 129.4 119 59.7
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 2.1e-28 129.4 121 59.5
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 6.1e-28 127.9 110 60.9
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 5.7e-26 121.3 113 59.3
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 2.2e-25 119.4 113 53.1
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 1.8e-24 116.3 81 70.4
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 3.1e-24 115.5 117 51.3
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.2e-22 109.4 77 67.5
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 5.0e-22 108.2 113 49.6
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.6e-20 103.2 77 64.9
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 4.0e-19 98.6 84 60.7
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 1.5e-18 96.7 71 73.2
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 2.6e-18 95.9 121 47.1
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 2.6e-18 95.9 112 44.6
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 9.7e-18 94.0 68 70.6
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.2e-15 87.0 84 57.1
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 1.9e-13 79.7 52 71.2
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 6.8e-11 71.2 56 62.5
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 2.0e-10 69.7 61 59.0
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 4.8e-09 65.1 144 38.9
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.8e-08 63.2 57 56.1
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 2.3e-06 56.2 55 52.7


User provided reference genes

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