Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 6.0e-138 494.2 253 100.0
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.1e-106 389.4 251 76.5
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.0e-105 387.1 253 75.1
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.3e-103 380.2 257 74.3
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 4.0e-102 375.2 252 72.6
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 3.4e-101 372.1 252 71.8
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.7e-100 369.8 252 73.0
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.7e-100 369.8 252 73.0
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.2e-100 369.4 252 71.4
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 3.2e-99 365.5 251 71.7
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.2e-98 363.6 253 70.8
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 3.5e-98 362.1 253 70.4
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 5.1e-97 358.2 251 70.1
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 8.7e-97 357.5 248 72.2
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 2.5e-96 355.9 252 68.7
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 1.4e-94 350.1 253 68.4
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 1.4e-94 350.1 253 68.8
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 9.0e-94 347.4 218 78.4
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 3.8e-92 342.0 253 68.0
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.2e-90 337.0 252 68.3
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.6e-90 336.7 252 65.5
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 2.7e-90 335.9 252 65.9
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.6e-90 335.5 251 66.5
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 6.1e-90 334.7 251 66.9
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.3e-89 333.6 253 65.6
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 4.3e-88 328.6 255 66.3
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.6e-87 326.6 246 63.0
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 1.6e-87 326.6 251 65.3
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 2.8e-87 325.9 322 54.0
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 4.8e-87 325.1 251 64.5
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 1.8e-86 323.2 271 59.0
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 4.1e-86 322.0 248 64.5
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 4.1e-86 322.0 251 63.7
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 2.0e-85 319.7 204 77.0
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 3.4e-85 318.9 259 62.5
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.0e-84 317.4 252 64.7
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 2.2e-84 316.2 214 71.0
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 3.8e-84 315.5 252 59.9
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 3.8e-84 315.5 252 59.9
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 1.4e-83 313.5 252 61.5
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 7.2e-83 311.2 252 59.1
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 7.2e-83 311.2 215 69.8
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 9.4e-83 310.8 249 61.0
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.0e-81 307.4 249 60.6
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.0e-81 307.4 256 60.5
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.4e-81 307.0 256 60.9
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 1.8e-81 306.6 249 61.4
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 3.9e-81 305.4 253 59.7
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 5.1e-81 305.1 253 62.1
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.5e-80 303.5 247 60.7
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 3.3e-80 302.4 253 58.5
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 4.4e-80 302.0 249 61.0
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 5.7e-80 301.6 236 63.1
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 5.7e-80 301.6 253 58.5
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 5.7e-80 301.6 254 59.8
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 5.7e-80 301.6 250 60.0
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 9.7e-80 300.8 249 61.8
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 2.8e-79 299.3 246 61.8
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 3.7e-79 298.9 252 61.5
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 3.7e-79 298.9 253 58.9
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 4.8e-79 298.5 253 56.5
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 4.8e-79 298.5 253 58.1
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 4.8e-79 298.5 253 58.1
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 4.8e-79 298.5 251 59.4
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 4.8e-79 298.5 256 57.8
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 6.3e-79 298.1 249 59.4
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.4e-78 297.0 250 61.6
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.8e-78 296.6 249 59.0
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 4.1e-78 295.4 260 56.9
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 6.9e-78 294.7 252 58.7
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 9.1e-78 294.3 252 59.1
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.0e-76 290.8 254 56.7
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 2.2e-76 289.7 257 59.5
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 3.8e-76 288.9 251 57.4
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 1.1e-75 287.3 254 58.7
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 4.2e-75 285.4 250 58.8
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 4.7e-74 282.0 254 56.3
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 3.9e-73 278.9 255 57.3
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 6.7e-73 278.1 251 57.4
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 8.8e-73 277.7 249 54.2
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 8.8e-73 277.7 249 54.2
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 1.5e-72 276.9 247 54.3
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.6e-72 276.2 255 56.9
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.7e-71 273.5 255 56.1
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 3.7e-71 272.3 252 55.6
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.4e-70 269.6 250 57.6
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 5.3e-70 268.5 206 64.6
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.6e-69 266.9 222 61.7
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 7.7e-69 264.6 211 60.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 1.5e-67 260.4 247 51.4
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 4.7e-66 255.4 240 52.9
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 1.7e-63 246.9 299 47.8
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 7.0e-62 241.5 204 58.3
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 2.0e-61 240.0 189 63.5
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 2.7e-58 229.6 253 51.8
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 9.8e-56 221.1 249 51.0
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 2.8e-55 219.5 182 62.6
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.6e-53 213.8 183 60.7
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 6.8e-49 198.4 123 76.4
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 3.7e-47 192.6 247 41.7
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 4.1e-46 189.1 142 66.2
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 3.5e-45 186.0 166 61.4
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 2.3e-44 183.3 147 63.3
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 2.8e-42 176.4 265 36.6
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 8.9e-41 171.4 130 68.5
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.5e-40 170.6 243 36.2
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 2.4e-38 163.3 131 64.9
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.7e-36 157.1 128 57.0
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.2e-34 151.0 202 39.6
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 6.2e-34 148.7 241 31.5
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 3.4e-32 142.9 173 42.8
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 6.8e-25 118.6 106 58.5
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 1.5e-24 117.5 142 48.6
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.4e-14 84.3 120 32.5
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 2.7e-13 80.1 228 27.2
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.3e-12 77.0 92 40.2
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 6.6e-12 75.5 110 45.5
Nn2g11894 Nelumbo nucifera HOM05D001060 ORTHO05D008097 1.9e-11 73.9 132 37.9
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 7.3e-11 72.0 57 70.2
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 4.7e-10 69.3 113 31.0
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 2.4e-09 67.0 130 36.2
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 5.8e-08 62.4 57 45.6
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 6.4e-07 58.9 75 41.3


User provided reference genes

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