Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 2.0e-86 322.4 159 100.0
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 5.6e-33 144.8 88 85.2
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 1.2e-32 143.7 89 82.0
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 7.6e-22 107.8 129 50.4
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 2.9e-21 105.9 106 55.7
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 7.1e-20 101.3 108 54.6
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 4.6e-19 98.6 106 53.8
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.3e-18 97.1 106 55.7
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 3.9e-18 95.5 104 53.8
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 6.6e-18 94.7 103 55.3
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 8.7e-18 94.4 120 47.5
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.9e-17 93.2 118 47.5
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.9e-17 93.2 108 51.9
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 4.3e-17 92.0 107 49.5
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 7.3e-17 91.3 106 51.9
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 1.6e-16 90.1 106 51.9
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.8e-16 89.4 106 51.9
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 2.8e-16 89.4 104 52.9
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 2.8e-16 89.4 107 52.3
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 8.1e-16 87.8 106 49.1
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 1.1e-15 87.4 110 52.7
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 1.8e-15 86.7 109 50.5
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 2.4e-15 86.3 106 50.9
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 4.0e-15 85.5 121 45.5
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 5.3e-15 85.1 130 43.8
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 6.9e-15 84.7 106 50.9
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 2.0e-14 83.2 104 50.0
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 2.0e-14 83.2 136 44.9
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 2.6e-14 82.8 104 46.2
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 2.6e-14 82.8 106 50.0
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 2.6e-14 82.8 111 46.8
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 2.6e-14 82.8 126 42.9
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 3.4e-14 82.4 104 49.0
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 3.4e-14 82.4 130 43.1
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 3.4e-14 82.4 106 49.1
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 3.4e-14 82.4 126 44.4
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 3.4e-14 82.4 126 44.4
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 3.4e-14 82.4 124 46.0
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 5.8e-14 81.6 105 49.5
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 5.8e-14 81.6 104 49.0
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 5.8e-14 81.6 107 48.6
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 7.6e-14 81.3 107 46.7
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 9.9e-14 80.9 108 48.1
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 9.9e-14 80.9 106 50.0
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.3e-13 80.5 104 52.9
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.3e-13 80.5 106 48.1
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 1.3e-13 80.5 106 48.1
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 2.2e-13 79.7 68 64.7
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 2.2e-13 79.7 122 45.9
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 2.9e-13 79.3 127 42.5
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.1e-12 77.4 106 47.2
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.4e-12 77.0 133 40.6
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 1.4e-12 77.0 106 47.2
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 1.4e-12 77.0 103 45.6
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.9e-12 76.6 106 48.1
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 3.2e-12 75.9 130 43.1
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.2e-12 75.9 106 48.1
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 3.2e-12 75.9 106 47.2
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 3.2e-12 75.9 104 45.2
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 4.2e-12 75.5 106 48.1
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 4.2e-12 75.5 111 46.8
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 4.2e-12 75.5 69 59.4
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 5.4e-12 75.1 119 44.5
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 7.1e-12 74.7 106 46.2
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 7.1e-12 74.7 129 43.4
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 9.3e-12 74.3 65 63.1
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 9.3e-12 74.3 65 64.6
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 9.3e-12 74.3 106 47.2
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.2e-11 73.9 111 45.0
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 1.6e-11 73.6 106 46.2
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 2.1e-11 73.2 107 44.9
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 2.1e-11 73.2 106 46.2
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.7e-11 72.8 99 49.5
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 4.6e-11 72.0 65 64.6
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 6.0e-11 71.6 129 39.5
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 6.0e-11 71.6 65 61.5
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 6.0e-11 71.6 69 58.0
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 7.9e-11 71.2 101 47.5
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.0e-10 70.9 69 58.0
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.3e-10 70.5 106 46.2
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 1.7e-10 70.1 101 45.5
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 2.3e-10 69.7 69 56.5
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 3.0e-10 69.3 106 45.3
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 3.9e-10 68.9 69 56.5
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 3.9e-10 68.9 69 56.5
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 3.9e-10 68.9 69 56.5
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 5.1e-10 68.6 69 56.5
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 5.1e-10 68.6 69 56.5
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 5.1e-10 68.6 69 56.5
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 5.1e-10 68.6 69 56.5
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 5.1e-10 68.6 69 56.5
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 8.7e-10 67.8 65 64.6
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 3.3e-09 65.9 78 52.6
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 3.3e-09 65.9 125 38.4
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 3.3e-09 65.9 69 53.6
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 2.1e-08 63.2 68 52.9
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 2.8e-08 62.8 106 41.5
Dinv27595 Davidia involucrata HOM05D006016 ORTHO05D183124 6.2e-08 61.6 28 96.4
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 3.1e-07 59.3 40 72.5
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 6.9e-07 58.2 133 36.8
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 1.2e-06 57.4 40 70.0
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.2e-06 57.4 49 63.3
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 1.2e-06 57.4 69 49.3
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.2e-06 57.4 46 60.9
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.2e-06 57.4 41 70.7
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 2.6e-06 56.2 40 67.5
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 3.4e-06 55.8 70 45.7
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 4.5e-06 55.5 58 58.6
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 7.6e-06 54.7 40 65.0


User provided reference genes

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