Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 2.9e-182 641.7 319 100.0
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 7.0e-152 540.8 319 83.1
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.4e-144 516.5 319 78.7
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 2.4e-144 515.8 318 79.6
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 5.4e-144 514.6 319 77.7
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 5.4e-144 514.6 319 77.7
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.2e-143 513.5 319 79.0
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.7e-143 512.3 319 79.3
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 5.0e-142 508.1 319 75.2
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 6.6e-142 507.7 319 78.1
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 6.6e-142 507.7 319 77.1
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 4.3e-141 505.0 319 77.1
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 5.6e-141 504.6 319 78.1
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 9.5e-141 503.8 319 77.1
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 2.1e-140 502.7 316 77.5
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 4.7e-140 501.5 319 76.5
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 8.0e-140 500.7 319 76.8
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.1e-139 500.4 321 78.8
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 3.1e-139 498.8 319 75.2
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 6.8e-139 497.7 319 75.9
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 7.5e-138 494.2 319 74.6
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.3e-137 493.4 319 73.7
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.1e-136 490.3 319 74.9
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 4.1e-136 488.4 319 72.7
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 5.4e-136 488.0 319 73.4
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 7.1e-136 487.6 319 74.3
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 9.2e-136 487.3 319 74.9
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 1.2e-135 486.9 319 72.1
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 2.7e-135 485.7 323 73.1
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 6.0e-135 484.6 320 73.1
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.0e-134 483.8 316 74.4
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 1.7e-134 483.0 319 72.4
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 3.9e-134 481.9 319 72.4
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 5.1e-134 481.5 319 72.7
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.1e-133 480.3 319 72.1
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 1.9e-133 479.6 319 73.4
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 3.3e-133 478.8 316 72.8
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 4.3e-133 478.4 320 72.2
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 1.4e-131 473.4 317 72.6
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 2.3e-131 472.6 321 71.7
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 3.1e-131 472.2 321 71.7
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 3.1e-131 472.2 320 71.2
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 4.0e-131 471.9 316 72.8
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 4.0e-131 471.9 316 71.5
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 4.0e-131 471.9 316 72.2
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 5.2e-131 471.5 316 72.5
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 6.8e-131 471.1 319 72.4
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 6.8e-131 471.1 319 71.5
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 8.9e-131 470.7 320 71.6
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 8.9e-131 470.7 320 71.6
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 8.9e-131 470.7 320 70.9
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.2e-130 470.3 320 70.6
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.2e-130 470.3 325 72.3
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.5e-130 469.9 319 71.8
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 7.6e-130 467.6 320 70.0
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 7.6e-130 467.6 320 70.9
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 9.9e-130 467.2 319 72.7
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 1.3e-129 466.8 316 71.8
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.3e-129 466.8 316 71.8
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.7e-129 466.5 322 72.7
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 1.7e-129 466.5 320 70.0
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.2e-129 466.1 319 70.8
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 2.9e-129 465.7 316 69.9
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 2.9e-129 465.7 319 74.3
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 3.7e-129 465.3 316 71.2
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 4.9e-129 464.9 319 70.2
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 6.4e-129 464.5 316 70.6
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.4e-128 463.4 320 71.2
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 7.1e-128 461.1 320 70.0
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.1e-127 459.5 321 68.5
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.7e-127 459.1 317 70.0
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 6.0e-127 458.0 319 70.2
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 7.8e-127 457.6 316 69.9
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 2.3e-126 456.1 319 70.5
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 3.0e-126 455.7 319 69.3
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 4.7e-124 448.4 319 69.9
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 6.2e-124 448.0 319 71.2
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 6.8e-123 444.5 317 67.2
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 4.2e-120 435.3 320 65.0
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 7.1e-120 434.5 320 65.9
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.2e-119 433.7 319 67.4
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 3.9e-118 428.7 317 66.9
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 5.1e-118 428.3 319 68.7
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 4.3e-117 425.2 319 67.1
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 3.1e-115 419.1 320 64.1
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 6.0e-111 404.8 320 64.4
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.3e-110 402.9 255 78.0
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 3.3e-109 399.1 319 63.3
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.3e-102 377.1 352 52.6
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.5e-101 372.9 299 64.9
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.2e-95 354.0 361 50.7
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.0e-94 350.9 319 59.9
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.8e-91 340.1 319 51.7
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 7.6e-90 334.7 239 66.9
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 6.1e-87 325.1 363 47.1
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.8e-78 297.0 251 63.7
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 3.0e-78 296.2 326 48.5
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.3e-76 290.8 210 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 1.2e-74 284.3 335 43.3
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 2.2e-68 263.5 282 48.2
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 2.0e-66 256.9 236 57.2
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.5e-64 250.0 331 41.1
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.2e-63 247.7 283 44.5
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.8e-54 217.2 341 38.7
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 5.0e-49 199.1 118 78.8
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 3.6e-47 193.0 118 78.0
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 4.0e-46 189.5 108 87.0
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 1.5e-45 187.6 142 69.7
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 4.4e-45 186.0 110 83.6
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 5.2e-38 162.5 101 74.3
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 4.7e-31 139.4 108 68.5
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 1.8e-30 137.5 100 70.0
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 4.4e-29 132.9 117 57.3
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.3e-22 110.5 68 72.1
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 1.5e-21 107.8 62 82.3
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 1.0e-09 68.6 52 65.4
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 1.0e-09 68.6 52 65.4
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.0e-09 67.0 47 68.1
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 3.0e-09 67.0 44 70.5
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 6.2e-07 59.3 31 87.1


User provided reference genes

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