Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09075 Davidia involucrata HOM05D005418 ORTHO05D006724 6.8e-40 166.8 79 100.0
Nn1g06291 Nelumbo nucifera HOM05D005418 ORTHO05D006724 9.2e-29 129.8 64 92.2
PGR102G0744 Punica granatum HOM05D005418 ORTHO05D006724 9.2e-29 129.8 64 92.2
Prupe.5G237600 Prunus persica HOM05D005418 ORTHO05D006724 2.1e-28 128.6 64 90.6
TAR365G0064 Trochodendron aralioides HOM05D005418 ORTHO05D006724 2.1e-28 128.6 64 90.6
MBI17_g45323_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 3.5e-28 127.9 64 90.6
Potri.015G036600 Populus trichocarpa HOM05D005418 ORTHO05D006724 3.5e-28 127.9 64 90.6
vmacro17855 Vaccinium macrocarpon HOM05D005418 ORTHO05D006724 3.5e-28 127.9 64 90.6
MD14G1240000 Malus domestica HOM05D005418 ORTHO05D006724 4.6e-28 127.5 64 89.1
CSS0002924 Camellia sinensis var. sinensis HOM05D005418 ORTHO05D006724 6.0e-28 127.1 64 89.1
Hund01906 Selenicereus undatus HOM05D005418 ORTHO05D006724 6.0e-28 127.1 64 89.1
Atru.chr9.1604 Acer truncatum HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
Ciclev10005966m.g Citrus clementina HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 90.6
Gohir.A05G289300 Gossypium hirsutum HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
Gohir.D05G290700 Gossypium hirsutum HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
Gorai.009G305700 Gossypium raimondii HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
PSO210G6190 Papaver somniferum HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
PSO832G3604 Papaver somniferum HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
Sabra15G0030200 Salix brachista HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
Sabra15G0031100 Salix brachista HOM05D005418 ORTHO05D006724 7.8e-28 126.7 64 89.1
arahy.Tifrunner.gnm1.ann1.20VKS9 Arachis hypogaea HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 89.1
CDE11G0106 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 87.5
FvH4_5g17750 Fragaria vesca HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 89.1
FAN08G1767 Fragaria x ananassa HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 89.1
FAN13G2408 Fragaria x ananassa HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 89.1
HanXRQChr14g0431131 Helianthus annuus HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 90.6
Manes.06G002300 Manihot esculenta HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 87.5
Manes.14G173200 Manihot esculenta HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 87.5
RcHm_v2.0_Chr7g0177871 Rosa chinensis HOM05D005418 ORTHO05D006724 1.0e-27 126.3 64 89.1
Actinidia06835 Actinidia chinensis HOM05D005418 ORTHO05D006724 1.3e-27 125.9 64 89.1
Actinidia09063 Actinidia chinensis HOM05D005418 ORTHO05D006724 1.3e-27 125.9 64 89.1
Duzib128G1895 Durio zibethinus HOM05D005418 ORTHO05D006724 1.3e-27 125.9 64 89.1
MSTRG.9356 Avicennia marina HOM05D005418 ORTHO05D006724 1.7e-27 125.6 64 87.5
Rhsim08G0113500 Rhododendron simsii HOM05D005418 ORTHO05D006724 1.7e-27 125.6 64 87.5
SalBow1G6390 Salvia bowleyana HOM05D005418 ORTHO05D006724 1.7e-27 125.6 64 87.5
GSVIVG01037420001 Vitis vinifera HOM05D005418 ORTHO05D006724 1.7e-27 125.6 64 87.5
Aa31LG4G11570 Aethionema arabicum HOM05D005418 ORTHO05D006724 2.3e-27 125.2 64 87.5
Cpa.g.sc64.48 Carica papaya HOM05D005418 ORTHO05D006724 2.3e-27 125.2 64 89.1
Ca_25975_v3 Cicer arietinum L. HOM05D005418 ORTHO05D006724 2.3e-27 125.2 64 89.1
THA.LOC104812146 Tarenaya hassleriana HOM05D005418 ORTHO05D006724 2.3e-27 125.2 64 87.5
TWI15G1138 Tripterygium wilfordii HOM05D005418 ORTHO05D006724 2.3e-27 125.2 64 85.9
DCAR_011383 Daucus carota HOM05D000073 ORTHO05D000033 3.0e-27 124.8 64 87.5
Lsat_1_v5_gn_2_11960 Lactuca sativa HOM05D005418 ORTHO05D006724 3.0e-27 124.8 64 87.5
TWI60G0409 Tripterygium wilfordii HOM05D005418 ORTHO05D006724 3.0e-27 124.8 64 85.9
CANSAT78G1374 Cannabis sativa HOM05D005418 ORTHO05D006724 3.9e-27 124.4 64 85.9
FAN18G2901 Fragaria x ananassa HOM05D005418 ORTHO05D006724 3.9e-27 124.4 64 87.5
Thecc.10G098100 Theobroma cacao HOM05D005418 ORTHO05D006724 3.9e-27 124.4 64 87.5
AT1G73820 Arabidopsis thaliana HOM05D005418 ORTHO05D006724 5.1e-27 124.0 64 85.9
arahy.Tifrunner.gnm1.ann1.XQM4JL Arachis hypogaea HOM05D005418 ORTHO05D006724 5.1e-27 124.0 63 88.9
Cfa005619 Carpinus fangiana HOM05D005418 ORTHO05D006724 5.1e-27 124.0 64 87.5
Haze_15514 Corylus avellana HOM05D005418 ORTHO05D006724 5.1e-27 124.0 64 87.5
QL10p031782 Quercus lobata HOM05D005418 ORTHO05D006724 5.1e-27 124.0 64 85.9
Aqoxy5G00519 Aquilegia oxysepala HOM05D005418 ORTHO05D006724 6.6e-27 123.6 64 89.1
Aqoxy6G02988 Aquilegia oxysepala HOM05D005418 ORTHO05D006724 6.6e-27 123.6 64 89.1
HPP92_026203 Vanilla planifolia HOM05D005418 ORTHO05D006724 6.6e-27 123.6 64 85.9
Cc04_g09290 Coffea canephora HOM05D005418 ORTHO05D006724 8.7e-27 123.2 64 85.9
ECA238G0283 Erigeron canadensis HOM05D005418 ORTHO05D006724 8.7e-27 123.2 64 87.5
Phvul.004G147300 Phaseolus vulgaris HOM05D005418 ORTHO05D006724 8.7e-27 123.2 64 87.5
AL2G33630 Arabidopsis lyrata HOM05D005418 ORTHO05D006724 1.1e-26 122.9 64 84.4
EL10Ac4g07600 Beta vulgaris HOM05D005418 ORTHO05D006724 1.1e-26 122.9 66 81.8
CARHR066900 Cardamine hirsuta HOM05D005418 ORTHO05D006724 1.1e-26 122.9 64 84.4
Thhalv10019100m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 1.1e-26 122.9 64 84.4
Nitab4.5_0006110g0060 Nicotiana tabacum HOM05D005418 ORTHO05D006724 1.1e-26 122.9 69 79.7
Carub.0002s2057 Capsella rubella HOM05D005418 ORTHO05D006724 1.5e-26 122.5 64 84.4
CiPaw.15G148000 Carya illinoinensis HOM05D005418 ORTHO05D006724 1.5e-26 122.5 64 85.9
Nitab4.5_0000430g0100 Nicotiana tabacum HOM05D005418 ORTHO05D006724 1.9e-26 122.1 64 84.4
Sp5g29010 Schrenkiella parvula HOM05D005418 ORTHO05D006724 1.9e-26 122.1 64 84.4
ClCG04G012830 Citrullus lanatus HOM05D005418 ORTHO05D006724 3.3e-26 121.3 64 84.4
MELO3C001923.2 Cucumis melo HOM05D005418 ORTHO05D006724 3.3e-26 121.3 64 84.4
CsaV3_1G004910 Cucumis sativus L. HOM05D005418 ORTHO05D006724 3.3e-26 121.3 64 84.4
Sed0019275 Sechium edule HOM05D005418 ORTHO05D006724 3.3e-26 121.3 64 84.4
ATR0827G099 Amborella trichopoda HOM05D005418 ORTHO05D006724 4.3e-26 120.9 57 94.7
BcaB03g15730 Brassica carinata HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
BcaC08g45620 Brassica carinata HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
A07p29640 Brassica napus HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
C06p33820 Brassica napus HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
BolC6t38495H Brassica oleracea HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
BraA07t30605Z Brassica rapa HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
Lalb_Chr22g0353611 Lupinus albus HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
Medtr0332s0040 Medicago truncatula HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 85.9
SEGI_01195 Sequoiadendron giganteum HOM05D005418 ORTHO05D006724 4.3e-26 120.9 66 81.8
TPR.G14843 Trifolium pratense HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 85.9
VMungo0464G1360 Vigna mungo HOM05D005418 ORTHO05D006724 4.3e-26 120.9 64 84.4
COL.COLO4_07665 Corchorus olitorius HOM05D005418 ORTHO05D006724 5.6e-26 120.6 64 82.8
Psat1g028800 Pisum sativum HOM05D005418 ORTHO05D006724 5.6e-26 120.6 64 84.4
Sc12g0008760 Simmondsia chinensis HOM05D005418 ORTHO05D006724 5.6e-26 120.6 62 85.5
Ah.06g181320 Amaranthus hybridus HOM05D005418 ORTHO05D006724 7.3e-26 120.2 64 82.8
CAN.G637.36 Capsicum annuum HOM05D005418 ORTHO05D006724 7.3e-26 120.2 64 84.4
COL.COLO4_34153 Corchorus olitorius HOM05D005418 ORTHO05D006724 7.3e-26 120.2 64 82.8
Lj2g0014184 Lotus japonicus HOM05D005418 ORTHO05D006724 7.3e-26 120.2 64 84.4
CDE12G0113 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 9.6e-26 119.8 64 82.8
unitig_899.g14817 Utricularia gibba HOM05D005418 ORTHO05D006724 9.6e-26 119.8 64 84.4
Glyma.07G106200 Glycine max HOM05D005418 ORTHO05D006724 1.2e-25 119.4 64 82.8
Solyc03g097990.3 Solanum lycopersicum HOM05D005418 ORTHO05D006724 1.2e-25 119.4 64 82.8
Sopen03g028700 Solanum pennellii HOM05D005418 ORTHO05D006724 1.2e-25 119.4 64 82.8
AUR62036432 Chenopodium quinoa HOM05D005418 ORTHO05D006724 1.6e-25 119.0 66 81.8
PGSC0003DMG400033680 Solanum tuberosum HOM05D005418 ORTHO05D006724 1.6e-25 119.0 64 82.8
Migut.D01215 Erythranthe guttata HOM05D005418 ORTHO05D006724 3.6e-25 117.9 64 81.2
Peaxi162Scf00171g00918 Petunia axillaris HOM05D005418 ORTHO05D006724 3.6e-25 117.9 64 81.2
SHI12596 Sapria himalayana HOM05D005418 ORTHO05D006724 4.7e-25 117.5 64 82.8
Mapoly0058s0033 Marchantia polymorpha HOM05D005418 ORTHO05D006724 6.2e-25 117.1 66 80.3
CDE01G0467 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 1.1e-24 116.3 64 82.8
SGA_v2.0_scaffold40G15645 Striga asiatica HOM05D005418 ORTHO05D006724 1.8e-24 115.5 64 81.2
BcaC08g46801 Brassica carinata HOM05D005418 ORTHO05D006724 5.2e-24 114.0 66 77.3
C06p47960 Brassica napus HOM05D005418 ORTHO05D006724 5.2e-24 114.0 66 77.3
BolC6t39831H Brassica oleracea HOM05D005418 ORTHO05D006724 5.2e-24 114.0 66 77.3
MD06G1233000 Malus domestica HOM05D005418 ORTHO05D006724 1.5e-23 112.5 64 81.2
CBR_g52356 Chara braunii HOM05D005418 ORTHO05D006724 2.0e-23 112.1 66 75.8
MBI17_g10951_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 2.6e-23 111.7 53 94.3
Pp3c24_6390 Physcomitrium patens HOM05D005418 ORTHO05D006724 2.2e-22 108.6 66 74.2
A07p39670 Brassica napus HOM05D005418 ORTHO05D006724 2.9e-22 108.2 66 74.2
BraA07t31516Z Brassica rapa HOM05D005418 ORTHO05D006724 2.9e-22 108.2 66 74.2
Os12g0168200 Oryza sativa ssp. japonica HOM05D005418 ORTHO05D006724 3.8e-22 107.8 64 75.0
Pp3c8_14260 Physcomitrium patens HOM05D005418 ORTHO05D006724 6.4e-22 107.1 66 72.7
Thhalv10019803m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 1.1e-21 106.3 64 76.6
Pp3c23_19050 Physcomitrium patens HOM05D005418 ORTHO05D006724 1.1e-21 106.3 66 71.2
Zm00001eb139180 Zea mays HOM05D005418 ORTHO05D006724 1.4e-21 105.9 64 75.0
Hma1.2p1_0471F.1_g159370 Hydrangea macrophylla HOM05D005418 ORTHO05D006724 1.6e-20 102.4 53 86.8
SMO232G0125 Selaginella moellendorffii HOM05D005418 ORTHO05D006724 2.1e-20 102.1 66 66.7
Lj9C416T2 Lonicera japonica HOM05D005418 ORTHO05D006724 1.3e-19 99.4 53 83.0
Cre02.g145300 Chlamydomonas reinhardtii HOM05D005418 ORTHO05D006724 5.6e-18 94.0 57 70.2
PGSC0003DMG400019995 Solanum tuberosum HOM05D005418 ORTHO05D006724 2.6e-15 85.1 50 74.0
PRCOL_00006990 Prasinoderma coloniale HOM05D005418 ORTHO05D006724 4.5e-15 84.3 67 61.2
COL.COLO4_32865 Corchorus olitorius HOM05D005418 ORTHO05D006724 1.2e-12 76.3 50 74.0
Cfa023691 Carpinus fangiana HOM05D005418 ORTHO05D006724 1.3e-11 72.8 67 53.7
MCO08G311 Micromonas commoda HOM05D005418 ORTHO05D006724 3.0e-11 71.6 68 52.9


User provided reference genes

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