Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 2.5e-56 221.9 111 100.0
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 1.9e-24 115.9 62 91.9
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 3.7e-23 111.7 62 88.7
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 4.8e-23 111.3 116 55.2
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 6.2e-23 110.9 60 86.7
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 6.2e-23 110.9 62 87.1
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 6.2e-23 110.9 113 55.8
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 6.2e-23 110.9 59 91.5
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 6.2e-23 110.9 62 85.5
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 8.2e-23 110.5 94 61.7
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 8.2e-23 110.5 94 61.7
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 8.2e-23 110.5 59 89.8
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 1.1e-22 110.2 94 60.6
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.4e-22 109.8 61 86.9
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 1.4e-22 109.8 62 83.9
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 1.8e-22 109.4 60 88.3
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 1.8e-22 109.4 60 88.3
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 1.8e-22 109.4 60 88.3
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 1.8e-22 109.4 60 88.3
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 2.4e-22 109.0 62 87.1
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 3.1e-22 108.6 62 85.5
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 3.1e-22 108.6 62 85.5
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 3.1e-22 108.6 62 87.1
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 3.1e-22 108.6 62 85.5
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 3.1e-22 108.6 96 60.4
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 3.1e-22 108.6 62 87.1
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 3.1e-22 108.6 62 87.1
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.1e-22 108.6 63 90.5
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 3.1e-22 108.6 60 88.3
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 4.0e-22 108.2 60 86.7
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 4.0e-22 108.2 60 86.7
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 4.0e-22 108.2 59 88.1
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 4.0e-22 108.2 62 83.9
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 4.0e-22 108.2 96 60.4
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 5.3e-22 107.8 59 86.4
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 5.3e-22 107.8 60 85.0
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 5.3e-22 107.8 116 55.2
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 5.3e-22 107.8 62 83.9
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 5.3e-22 107.8 62 83.9
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 5.3e-22 107.8 62 85.5
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 6.9e-22 107.5 59 91.5
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 6.9e-22 107.5 62 85.5
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 6.9e-22 107.5 62 85.5
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 6.9e-22 107.5 96 60.4
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 9.0e-22 107.1 62 83.9
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 1.2e-21 106.7 59 86.4
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 1.2e-21 106.7 62 82.3
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.5e-21 106.3 59 88.1
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.5e-21 106.3 59 88.1
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 2.0e-21 105.9 62 82.3
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 2.0e-21 105.9 60 83.3
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 2.0e-21 105.9 59 86.4
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 2.0e-21 105.9 59 86.4
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 2.0e-21 105.9 62 83.9
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 2.0e-21 105.9 62 82.3
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 2.0e-21 105.9 93 60.2
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 2.0e-21 105.9 62 83.9
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 2.0e-21 105.9 113 54.9
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 2.6e-21 105.5 60 83.3
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 2.6e-21 105.5 62 82.3
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 2.6e-21 105.5 62 85.5
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 2.6e-21 105.5 62 85.5
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 3.4e-21 105.1 116 53.4
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 3.4e-21 105.1 58 87.9
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 4.5e-21 104.8 59 84.7
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 4.5e-21 104.8 56 89.3
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 4.5e-21 104.8 58 86.2
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 4.5e-21 104.8 62 80.6
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 5.8e-21 104.4 62 82.3
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 7.6e-21 104.0 93 59.1
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.0e-20 103.6 60 80.0
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.3e-20 103.2 59 84.7
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 1.3e-20 103.2 93 59.1
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 2.2e-20 102.4 62 80.6
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 2.9e-20 102.1 59 83.1
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 2.9e-20 102.1 62 79.0
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 2.9e-20 102.1 62 79.0
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 2.9e-20 102.1 55 89.1
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 3.8e-20 101.7 54 92.6
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 4.9e-20 101.3 56 89.3
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 6.5e-20 100.9 60 80.0
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 1.1e-19 100.1 56 85.7
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 1.4e-19 99.8 62 79.0
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 1.9e-19 99.4 59 79.7
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 2.5e-19 99.0 62 79.0
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 2.5e-19 99.0 63 81.0
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 3.2e-19 98.6 59 81.4
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 3.2e-19 98.6 59 81.4
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 4.2e-19 98.2 113 50.4
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 9.3e-19 97.1 54 87.0
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 1.2e-18 96.7 70 72.9
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 2.7e-18 95.5 75 68.0
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.5e-18 95.1 58 79.3
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.5e-18 95.1 58 79.3
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.5e-18 95.1 58 79.3
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 6.0e-18 94.4 60 78.3
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 7.9e-18 94.0 59 76.3
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.8e-17 92.8 52 84.6
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.3e-17 92.4 57 80.7
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 2.3e-17 92.4 59 76.3
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 6.7e-17 90.9 56 80.4
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 1.9e-16 89.4 113 50.4
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 3.7e-15 85.1 48 83.3
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 2.9e-12 75.5 60 65.0
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 7.2e-11 70.9 60 60.0
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 1.6e-10 69.7 86 50.0
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 2.2e-07 59.3 58 50.0
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 1.8e-06 56.2 40 72.5
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 5.3e-06 54.7 25 96.0


User provided reference genes

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