Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01185 Davidia involucrata HOM05D005984 ORTHO05D007754 9.7e-115 416.8 203 100.0
Dinv11718 Davidia involucrata HOM05D005984 ORTHO05D007754 2.8e-114 415.2 203 99.5
Actinidia13710 Actinidia chinensis HOM05D005984 ORTHO05D007754 1.3e-111 406.4 203 96.6
CiPaw.06G060100 Carya illinoinensis HOM05D005984 ORTHO05D007754 1.3e-111 406.4 203 97.0
PGR044G2022 Punica granatum HOM05D005984 ORTHO05D007754 1.3e-111 406.4 203 95.6
Potri.007G071300 Populus trichocarpa HOM05D005984 ORTHO05D007754 2.2e-111 405.6 203 95.6
Sabra07G0060100 Salix brachista HOM05D005984 ORTHO05D007754 6.5e-111 404.1 203 95.1
Cpa.g.sc44.38 Carica papaya HOM05D005984 ORTHO05D007754 1.1e-110 403.3 201 95.5
Lj3g0024041 Lotus japonicus HOM05D005984 ORTHO05D007754 1.1e-110 403.3 203 95.1
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea HOM05D005984 ORTHO05D007754 1.5e-110 402.9 203 95.1
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea HOM05D005984 ORTHO05D007754 1.5e-110 402.9 203 95.1
Gohir.A03G164600 Gossypium hirsutum HOM05D005984 ORTHO05D007754 1.5e-110 402.9 203 95.1
Gohir.D02G187800 Gossypium hirsutum HOM05D005984 ORTHO05D007754 1.9e-110 402.5 203 94.6
Gorai.005G210500 Gossypium raimondii HOM05D005984 ORTHO05D007754 1.9e-110 402.5 203 94.6
Aqoxy3G04258 Aquilegia oxysepala HOM05D005984 ORTHO05D007754 3.2e-110 401.7 203 95.1
Cfa008738 Carpinus fangiana HOM05D005984 ORTHO05D007754 3.2e-110 401.7 203 95.6
Manes.11G108100 Manihot esculenta HOM05D005984 ORTHO05D007754 3.2e-110 401.7 203 95.1
TWI53G1952 Tripterygium wilfordii HOM05D005984 ORTHO05D007754 3.2e-110 401.7 203 94.6
vmacro08597 Vaccinium macrocarpon HOM05D005984 ORTHO05D007754 3.2e-110 401.7 203 95.6
Atru.chr11.1117 Acer truncatum HOM05D005984 ORTHO05D007754 4.2e-110 401.4 203 94.1
TAR629G1998 Trochodendron aralioides HOM05D005984 ORTHO05D007754 4.2e-110 401.4 203 94.6
Ciclev10031672m.g Citrus clementina HOM05D005984 ORTHO05D007754 5.5e-110 401.0 203 93.6
ClCG09G004540 Citrullus lanatus HOM05D005984 ORTHO05D007754 7.2e-110 400.6 203 93.6
Glyma.11G100800 Glycine max HOM05D005984 ORTHO05D007754 1.2e-109 399.8 203 94.6
Phvul.011G029800 Phaseolus vulgaris HOM05D005984 ORTHO05D007754 1.2e-109 399.8 203 94.6
VMungo0647G2306 Vigna mungo HOM05D005984 ORTHO05D007754 1.2e-109 399.8 203 94.6
VMungo1127G1047 Vigna mungo HOM05D005984 ORTHO05D007754 1.2e-109 399.8 203 94.6
GSVIVG01012045001 Vitis vinifera HOM05D005984 ORTHO05D007754 1.2e-109 399.8 203 94.6
Actinidia38413 Actinidia chinensis HOM05D005984 ORTHO05D007754 1.6e-109 399.4 199 96.5
Thecc.02G160200 Theobroma cacao HOM05D005984 ORTHO05D007754 2.1e-109 399.1 203 94.6
Prupe.1G347100 Prunus persica HOM05D005984 ORTHO05D007754 2.7e-109 398.7 203 93.6
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 4.7e-109 397.9 203 94.1
Lsat_1_v5_gn_3_35480 Lactuca sativa HOM05D005984 ORTHO05D007754 4.7e-109 397.9 203 93.1
Sed0006813 Sechium edule HOM05D005984 ORTHO05D007754 4.7e-109 397.9 203 92.6
CsaV3_7G030600 Cucumis sativus L. HOM05D005984 ORTHO05D007754 6.1e-109 397.5 203 92.6
Glyma.12G026900 Glycine max HOM05D005984 ORTHO05D007754 6.1e-109 397.5 203 94.1
TPR.G32343 Trifolium pratense HOM05D005984 ORTHO05D007754 8.0e-109 397.1 203 94.1
Lalb_Chr03g0024761 Lupinus albus HOM05D005984 ORTHO05D007754 1.4e-108 396.4 203 92.6
Manes.04G064200 Manihot esculenta HOM05D005984 ORTHO05D007754 1.4e-108 396.4 203 93.1
Medtr4g075040 Medicago truncatula HOM05D005984 ORTHO05D007754 3.0e-108 395.2 203 93.6
CSS0012805 Camellia sinensis var. sinensis HOM05D005984 ORTHO05D007754 4.0e-108 394.8 203 93.1
Duzib052G0297 Durio zibethinus HOM05D005984 ORTHO05D007754 4.0e-108 394.8 203 92.6
Haze_11755 Corylus avellana HOM05D005984 ORTHO05D007754 5.2e-108 394.4 213 91.1
ATR0618G114 Amborella trichopoda HOM05D005984 ORTHO05D007754 6.8e-108 394.0 203 93.1
DCAR_002576 Daucus carota HOM05D005984 ORTHO05D007754 6.8e-108 394.0 203 92.6
ECA246G1868 Erigeron canadensis HOM05D005984 ORTHO05D007754 8.8e-108 393.7 203 91.6
Eucgr.J00865 Eucalyptus grandis HOM05D005984 ORTHO05D007754 8.8e-108 393.7 203 93.1
PSO063G6567 Papaver somniferum HOM05D005984 ORTHO05D007754 8.8e-108 393.7 203 92.1
RcHm_v2.0_Chr4g0446671 Rosa chinensis HOM05D005984 ORTHO05D007754 8.8e-108 393.7 203 92.6
Sed0023953 Sechium edule HOM05D005984 ORTHO05D007754 8.8e-108 393.7 203 91.6
THA.LOC104800911 Tarenaya hassleriana HOM05D005984 ORTHO05D007754 8.8e-108 393.7 203 92.6
AT5G23120 Arabidopsis thaliana HOM05D005984 ORTHO05D007754 1.2e-107 393.3 203 92.1
MSTRG.431 Avicennia marina HOM05D005984 ORTHO05D007754 1.5e-107 392.9 203 92.6
CANSAT56G2432 Cannabis sativa HOM05D005984 ORTHO05D007754 1.5e-107 392.9 203 90.6
FvH4_4g36890 Fragaria vesca HOM05D005984 ORTHO05D007754 1.5e-107 392.9 203 92.1
FAN07G1379 Fragaria x ananassa HOM05D005984 ORTHO05D007754 1.5e-107 392.9 203 92.1
FAN12G1392 Fragaria x ananassa HOM05D005984 ORTHO05D007754 1.5e-107 392.9 203 92.1
Psat7g177360 Pisum sativum HOM05D005984 ORTHO05D007754 1.5e-107 392.9 203 92.1
CAN.G157.24 Capsicum annuum HOM05D005984 ORTHO05D007754 2.0e-107 392.5 203 91.6
PSO782G0234 Papaver somniferum HOM05D005984 ORTHO05D007754 2.0e-107 392.5 203 91.6
MD16G1002000 Malus domestica HOM05D005984 ORTHO05D007754 2.6e-107 392.1 200 92.5
Sopen02g003530 Solanum pennellii HOM05D005984 ORTHO05D007754 2.6e-107 392.1 203 91.1
AL6G34310 Arabidopsis lyrata HOM05D005984 ORTHO05D007754 5.7e-107 391.0 203 91.1
CDE07G0658 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 5.7e-107 391.0 203 91.6
PGSC0003DMG400002324 Solanum tuberosum HOM05D005984 ORTHO05D007754 5.7e-107 391.0 203 90.6
Zm00001eb271820 Zea mays HOM05D005984 ORTHO05D007754 5.7e-107 391.0 203 91.6
MD13G1005900 Malus domestica HOM05D005984 ORTHO05D007754 7.5e-107 390.6 203 91.6
SalBow2G1456 Salvia bowleyana HOM05D005984 ORTHO05D007754 7.5e-107 390.6 203 91.1
Lj3A850G95 Lonicera japonica HOM05D005984 ORTHO05D007754 9.8e-107 390.2 203 91.6
Sp2g24000 Schrenkiella parvula HOM05D005984 ORTHO05D007754 9.8e-107 390.2 203 90.6
HPP92_012878 Vanilla planifolia HOM05D005984 ORTHO05D007754 1.3e-106 389.8 203 91.6
A03p46390 Brassica napus HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
C07p44410 Brassica napus HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
BolC7t44963H Brassica oleracea HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
BraA03t13765Z Brassica rapa HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
Carub.0006s2091 Capsella rubella HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
CARHR190410 Cardamine hirsuta HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
Migut.E00699 Erythranthe guttata HOM05D005984 ORTHO05D007754 1.7e-106 389.4 202 91.1
Thhalv10004338m.g Eutrema salsugineum HOM05D005984 ORTHO05D007754 1.7e-106 389.4 203 90.6
Cc11_g02280 Coffea canephora HOM05D005984 ORTHO05D007754 2.2e-106 389.0 203 91.1
Os06g0729650 Oryza sativa ssp. japonica HOM05D005984 ORTHO05D007754 2.2e-106 389.0 203 91.1
Ca_19021_v3 Cicer arietinum L. HOM05D005984 ORTHO05D007754 2.8e-106 388.7 225 85.8
Aa31LG11G2610 Aethionema arabicum HOM05D005984 ORTHO05D007754 6.3e-106 387.5 203 89.7
Hund08579 Selenicereus undatus HOM05D005984 ORTHO05D007754 1.1e-105 386.7 211 88.2
AUR62015232 Chenopodium quinoa HOM05D005984 ORTHO05D007754 1.4e-105 386.3 203 90.6
AUR62015234 Chenopodium quinoa HOM05D005984 ORTHO05D007754 1.4e-105 386.3 203 90.6
AUR62017696 Chenopodium quinoa HOM05D005984 ORTHO05D007754 1.4e-105 386.3 203 90.6
Nitab4.5_0000133g0050 Nicotiana tabacum HOM05D005984 ORTHO05D007754 2.7e-104 382.1 212 86.8
Nitab4.5_0006277g0020 Nicotiana tabacum HOM05D005984 ORTHO05D007754 2.7e-104 382.1 212 86.8
SGA_v2.0_scaffold88G27230 Striga asiatica HOM05D005984 ORTHO05D007754 2.7e-104 382.1 222 84.7
COL.COLO4_19602 Corchorus olitorius HOM05D005984 ORTHO05D007754 7.7e-104 380.6 244 78.7
Oeu026903.3 Olea europaea HOM05D005984 ORTHO05D007754 7.7e-104 380.6 240 79.6
unitig_8.g2892 Utricularia gibba HOM05D005984 ORTHO05D007754 1.3e-103 379.8 203 88.2
EL10Ac9g22946 Beta vulgaris HOM05D005984 ORTHO05D007754 1.6e-101 372.9 222 82.4
Nn3g18651 Nelumbo nucifera HOM05D005984 ORTHO05D007754 3.4e-99 365.2 184 94.0
QL03p045967 Quercus lobata HOM05D005984 ORTHO05D007754 1.3e-98 363.2 295 65.4
Rhsim04G0167300 Rhododendron simsii HOM05D005984 ORTHO05D007754 1.7e-98 362.8 203 87.7
Pp3c15_7930 Physcomitrium patens HOM05D005984 ORTHO05D007754 2.8e-98 362.1 203 85.7
Pp3c9_10350 Physcomitrium patens HOM05D005984 ORTHO05D007754 5.4e-97 357.8 203 84.7
MELO3C023596.2 Cucumis melo HOM05D005984 ORTHO05D007754 9.1e-97 357.1 184 91.3
SMO347G0352 Selaginella moellendorffii HOM05D005984 ORTHO05D007754 9.1e-97 357.1 203 82.3
HanXRQChr06g0171511 Helianthus annuus HOM05D005984 ORTHO05D007754 1.6e-96 356.3 180 93.9
HanXRQChr17g0544921 Helianthus annuus HOM05D005984 ORTHO05D007754 1.6e-96 356.3 180 93.9
Solyc02g014150.4 Solanum lycopersicum HOM05D005984 ORTHO05D007754 1.5e-94 349.7 180 90.6
Sc10g0006780 Simmondsia chinensis HOM05D005984 ORTHO05D007754 7.2e-94 347.4 181 91.7
Peaxi162Scf00363g00317 Petunia axillaris HOM05D005984 ORTHO05D007754 1.4e-92 343.2 189 87.3
Ah.01g001560 Amaranthus hybridus HOM05D005984 ORTHO05D007754 1.3e-90 336.7 202 80.7
Mapoly0020s0149 Marchantia polymorpha HOM05D005984 ORTHO05D007754 3.7e-90 335.1 203 77.3
CDE04G0799 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 6.0e-80 301.2 203 74.4
CBR_g11122 Chara braunii HOM05D005984 ORTHO05D007754 2.3e-79 299.3 202 69.8
Cre06.g273700 Chlamydomonas reinhardtii HOM05D005984 ORTHO05D007754 8.6e-71 270.8 203 60.6
MCO05G498 Micromonas commoda HOM05D005984 ORTHO05D007754 3.3e-70 268.9 206 58.3
FAN17G0887 Fragaria x ananassa HOM05D005984 ORTHO05D007754 2.1e-64 249.6 128 90.6
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis HOM05D005984 ORTHO05D007754 2.3e-63 246.1 178 69.1
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 7.3e-62 241.1 118 95.8
PRCOL_00000217 Prasinoderma coloniale HOM05D005984 ORTHO05D007754 3.2e-57 225.7 175 58.9
MD15G1106700 Malus domestica HOM05D005984 ORTHO05D007754 1.5e-51 206.8 102 94.1
C09p07860 Brassica napus HOM05D005984 ORTHO05D007754 7.6e-51 204.5 181 62.4
MD00G1043400 Malus domestica HOM05D005984 ORTHO05D007754 5.8e-43 178.3 111 78.4
BcaB04g19886 Brassica carinata HOM05D005984 ORTHO05D007754 5.6e-38 161.8 203 50.2
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 3.2e-33 146.0 192 40.1
HanXRQChr10g0318441 Helianthus annuus HOM05D005984 ORTHO05D007754 5.1e-31 138.7 69 91.3
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 1.2e-27 127.5 85 72.9
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 1.7e-26 123.6 83 72.3
AUR62024854 Chenopodium quinoa HOM05D005984 ORTHO05D007754 7.4e-22 108.2 57 93.0
SEGI_27749 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 4.1e-20 102.4 53 84.9
MBI03_g15323_MAGBIO Magnolia biondii HOM05D002934 ORTHO05D003937 3.0e-15 86.3 43 90.7
Zm00001eb227280 Zea mays HOM05D005984 ORTHO05D007754 1.3e-13 80.9 62 66.1
Glyma.01G000174 Glycine max HOM05D036214 ORTHO05D007754 1.5e-11 73.9 43 81.4
Pp3c24_8290 Physcomitrium patens HOM05D013586 ORTHO05D011470 8.5e-10 68.2 38 76.3
SGA_v2.0_scaffold57G20111 Striga asiatica HOM05D005984 ORTHO05D402503 6.1e-08 62.0 39 69.2
SEGI_34707 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 1.0e-07 61.2 32 84.4
Glyma.06G237300 Glycine max HOM05D005984 ORTHO05D007754 3.0e-07 59.7 58 58.6


User provided reference genes

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