Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 2.0e-103 379.0 185 100.0
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-97 358.2 185 92.4
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-97 358.2 185 92.4
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-97 358.2 185 92.4
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-97 358.2 185 92.4
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-97 358.2 185 92.4
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-97 358.2 185 92.4
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 4.1e-96 354.8 185 91.4
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 7.8e-95 350.5 185 91.4
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 7.8e-95 350.5 185 91.4
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 2.3e-94 349.0 185 91.4
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 5.1e-94 347.8 185 91.4
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.1e-93 346.7 185 90.3
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 2.1e-92 342.4 182 90.1
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 4.7e-92 341.3 185 88.6
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 4.7e-92 341.3 185 89.2
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 8.1e-92 340.5 185 87.6
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 8.1e-92 340.5 185 87.6
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 89.2
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 2.0e-90 335.9 185 87.0
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 5.8e-90 334.3 185 87.6
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 3.8e-89 331.6 185 87.0
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 1.4e-88 329.7 185 86.5
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 7.1e-88 327.4 171 92.4
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 7.1e-88 327.4 171 92.4
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 9.2e-88 327.0 185 86.5
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 2.7e-87 325.5 185 85.9
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.7e-86 322.8 182 86.3
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 3.0e-86 322.0 185 85.4
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 1.1e-85 320.1 185 84.9
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 1.1e-85 320.1 185 84.9
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 1.1e-85 320.1 185 84.9
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 1.1e-85 320.1 185 84.9
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 1.1e-85 320.1 185 84.9
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 7.3e-85 317.4 185 83.8
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 7.3e-85 317.4 185 84.3
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 7.3e-85 317.4 185 84.3
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 7.3e-85 317.4 185 84.3
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 8.1e-84 313.9 185 85.4
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 1.3e-81 306.6 185 81.6
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 1.9e-80 302.8 184 80.4
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 4.6e-79 298.1 170 85.9
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.0e-78 297.0 182 80.2
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.1e-77 293.5 182 79.7
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.8e-75 286.2 185 75.7
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 2.4e-75 285.8 185 78.4
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-75 285.4 182 78.0
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-75 285.4 182 78.0
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 3.4e-74 282.0 170 80.6
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 7.6e-74 280.8 185 77.3
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 1.7e-73 279.6 158 84.8
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 6.4e-73 277.7 182 78.0
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.4e-73 277.3 182 76.4
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 2.3e-70 269.2 185 73.0
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.4e-67 259.2 182 73.1
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.7e-65 253.1 185 71.4
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-62 243.8 141 83.0
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 1.3e-62 243.4 133 85.7
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.9e-62 241.9 182 67.6
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 5.1e-62 241.5 130 86.9
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 5.6e-61 238.0 118 94.9
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-60 236.5 120 93.3
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-60 236.5 120 93.3
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-60 236.5 120 93.3
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.4e-59 233.4 122 89.3
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 9.0e-59 230.7 119 89.1
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 7.6e-58 227.6 120 88.3
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 1.7e-57 226.5 120 90.8
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 2.9e-57 225.7 117 88.9
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.9e-57 225.7 120 89.2
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.8e-57 225.3 154 70.8
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.4e-56 223.4 127 84.3
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.9e-56 223.0 117 88.0
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.5e-56 222.6 177 67.2
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.6e-55 219.9 120 85.8
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 2.3e-54 216.1 120 88.3
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 1.1e-53 213.8 120 85.8
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 1.1e-53 213.8 120 85.8
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.1e-53 213.8 138 74.6
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 1.5e-53 213.4 186 60.2
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 7.4e-53 211.1 119 84.9
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 7.4e-53 211.1 124 83.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 5.9e-50 201.4 113 82.3
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.0e-49 200.7 192 54.7
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 5.0e-49 198.4 110 84.5
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.5e-48 196.1 106 87.7
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.1e-47 193.0 103 90.3
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 3.6e-47 192.2 98 91.8
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 7.9e-47 191.0 178 47.8
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 7.9e-47 191.0 95 95.8
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 7.9e-47 191.0 187 58.8
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.0e-46 189.1 98 89.8
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 3.9e-46 188.7 97 92.8
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 3.9e-46 188.7 94 94.7
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 6.7e-46 188.0 123 78.0
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 8.7e-46 187.6 98 88.8
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.9e-45 186.4 127 72.4
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 4.3e-45 185.3 115 75.7
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 5.7e-45 184.9 95 90.5
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 5.7e-45 184.9 95 90.5
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 5.7e-45 184.9 119 73.1
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.6e-44 183.3 95 91.6
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 4.8e-44 181.8 193 51.8
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 6.3e-44 181.4 112 78.6
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 6.3e-44 181.4 123 74.8
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 6.3e-44 181.4 175 57.1
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 1.4e-43 180.3 120 75.0
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 1.4e-43 180.3 192 52.6
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.4e-43 180.3 97 84.5
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.4e-43 180.3 113 75.2
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 3.1e-43 179.1 185 49.7
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 4.1e-43 178.7 120 77.5
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 4.1e-43 178.7 121 72.7
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 1.2e-42 177.2 95 85.3
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 1.2e-42 177.2 120 74.2
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.5e-42 176.8 98 83.7
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 1.5e-42 176.8 94 89.4
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 2.0e-42 176.4 176 57.4
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.0e-41 174.1 94 85.1
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.0e-41 174.1 100 82.0
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 1.0e-41 174.1 90 90.0
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 1.3e-41 173.7 120 74.2
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 2.2e-41 172.9 103 78.6
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.9e-41 172.6 95 83.2
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.1e-40 170.6 186 54.3
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.2e-40 168.7 92 83.7
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 5.5e-40 168.3 120 65.8
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 5.5e-40 168.3 117 71.8
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.6e-39 165.6 87 89.7
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.0e-38 164.1 94 78.7
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.3e-36 157.1 86 84.9
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 2.2e-36 156.4 174 48.3
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 2.8e-36 156.0 131 61.1
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 6.9e-35 151.4 88 81.8
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.6e-34 149.4 99 72.7
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 5.5e-32 141.7 167 52.1
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.7e-30 134.8 78 80.8
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.7e-30 134.8 78 80.8
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.7e-30 134.8 78 80.8
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.7e-30 134.8 78 80.8
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.7e-30 134.8 78 80.8
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 8.8e-30 134.4 81 80.2
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.0e-29 133.3 77 80.5
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.0e-29 133.3 77 80.5
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.0e-29 133.3 77 80.5
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.0e-29 133.3 77 80.5
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.0e-29 133.3 77 80.5
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.7e-28 130.2 70 82.9
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.7e-28 129.0 125 57.6
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 3.5e-26 122.5 96 62.5
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 5.0e-25 118.6 156 49.4
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 9.4e-24 114.4 64 87.5
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.7e-23 112.8 123 50.4
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.4e-22 110.5 61 86.9
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.3e-22 109.8 70 70.0
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.2e-21 107.5 82 64.6
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 5.7e-21 105.1 62 75.8
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 2.2e-20 103.2 62 82.3
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.8e-20 102.8 62 77.4
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 3.7e-20 102.4 118 50.0
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.7e-20 102.4 78 65.4
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 3.7e-20 102.4 111 49.5
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 1.8e-19 100.1 91 57.1
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 2.4e-19 99.8 64 78.1
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 5.3e-19 98.6 74 60.8
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 9.1e-19 97.8 61 80.3
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-18 97.1 60 73.3
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 2.0e-18 96.7 55 85.5
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 2.7e-18 96.3 60 78.3
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 3.5e-18 95.9 53 84.9
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 3.5e-18 95.9 53 84.9
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 3.5e-18 95.9 62 79.0
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 3.8e-17 92.4 60 75.0
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 3.8e-17 92.4 93 53.8
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 2.5e-16 89.7 52 78.8
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 5.5e-16 88.6 49 85.7
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 3.6e-15 85.9 57 78.9
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 2.8e-12 76.3 49 75.5
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.4e-11 73.2 49 71.4
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 2.7e-10 69.7 33 90.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 2.7e-10 69.7 33 90.9
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 3.5e-10 69.3 49 71.4
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 1.0e-09 67.8 36 83.3
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 3.8e-09 65.9 32 90.6
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.1e-08 64.3 36 88.9
FAN07G1499 Fragaria x ananassa HOM05D000806 ORTHO05D007429 8.0e-07 58.2 54 55.6


User provided reference genes

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