Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031603 Daucus carota HOM05D003237 ORTHO05D003631 2.0e-89 332.4 168 100.0
DCAR_002130 Daucus carota HOM05D003237 ORTHO05D003631 2.3e-69 265.8 175 81.1
Rhsim01G0196700 Rhododendron simsii HOM05D003237 ORTHO05D003631 2.0e-57 226.1 173 72.8
CSS0011655 Camellia sinensis var. sinensis HOM05D003237 ORTHO05D003631 3.4e-57 225.3 173 71.1
CSS0037994 Camellia sinensis var. sinensis HOM05D003237 ORTHO05D003631 3.4e-57 225.3 173 71.1
Actinidia22473 Actinidia chinensis HOM05D003237 ORTHO05D003631 2.2e-56 222.6 173 72.8
Actinidia06362 Actinidia chinensis HOM05D003237 ORTHO05D003631 2.9e-56 222.2 173 72.3
Dinv05234 Davidia involucrata HOM05D003237 ORTHO05D003631 8.5e-56 220.7 173 71.1
Dinv02325 Davidia involucrata HOM05D003237 ORTHO05D003631 1.4e-55 219.9 173 71.1
Hma1.2p1_0218F.1_g092610 Hydrangea macrophylla HOM05D003237 ORTHO05D003631 1.2e-54 216.9 173 70.5
Prupe.6G153800 Prunus persica HOM05D003237 ORTHO05D003631 1.6e-54 216.5 173 69.4
Cfa010256 Carpinus fangiana HOM05D003237 ORTHO05D003631 6.1e-54 214.5 172 67.4
CANSAT54G1397 Cannabis sativa HOM05D003237 ORTHO05D003631 2.3e-53 212.6 173 66.5
FvH4_3g27130 Fragaria vesca HOM05D003237 ORTHO05D003631 2.3e-53 212.6 173 67.6
FAN11G2711 Fragaria x ananassa HOM05D003237 ORTHO05D003631 2.3e-53 212.6 173 67.6
FAN16G3041 Fragaria x ananassa HOM05D003237 ORTHO05D003631 2.3e-53 212.6 173 67.6
FAN25G1344 Fragaria x ananassa HOM05D003237 ORTHO05D003631 2.3e-53 212.6 173 67.6
Potri.009G158600 Populus trichocarpa HOM05D003237 ORTHO05D003631 3.0e-53 212.2 173 69.4
FAN21G2928 Fragaria x ananassa HOM05D003237 ORTHO05D003631 3.9e-53 211.8 173 67.6
Nitab4.5_0002300g0140 Nicotiana tabacum HOM05D003237 ORTHO05D003631 3.9e-53 211.8 172 69.2
RcHm_v2.0_Chr5g0049831 Rosa chinensis HOM05D003237 ORTHO05D003631 3.9e-53 211.8 173 68.8
MD11G1180900 Malus domestica HOM05D003237 ORTHO05D003631 6.7e-53 211.1 173 67.6
Nitab4.5_0000428g0160 Nicotiana tabacum HOM05D003237 ORTHO05D003631 8.8e-53 210.7 172 68.6
Sed0025717 Sechium edule HOM05D003237 ORTHO05D003631 8.8e-53 210.7 172 69.2
Sabra04G0133100 Salix brachista HOM05D003237 ORTHO05D003631 2.0e-52 209.5 173 68.2
COL.COLO4_18368 Corchorus olitorius HOM05D003237 ORTHO05D003631 4.3e-52 208.4 173 67.1
ECA240G0992 Erigeron canadensis HOM05D003237 ORTHO05D003631 4.3e-52 208.4 171 68.4
ClCG03G014170 Citrullus lanatus HOM05D003237 ORTHO05D003631 5.7e-52 208.0 172 68.0
Potri.004G196400 Populus trichocarpa HOM05D003237 ORTHO05D003631 5.7e-52 208.0 173 68.2
Sabra09G0124100 Salix brachista HOM05D003237 ORTHO05D003631 9.7e-52 207.2 173 68.2
GSVIVG01037454001 Vitis vinifera HOM05D003237 ORTHO05D003631 9.7e-52 207.2 172 68.6
SalBow3G0543 Salvia bowleyana HOM05D003237 ORTHO05D003631 1.3e-51 206.8 172 69.8
TWI75G1610 Tripterygium wilfordii HOM05D003237 ORTHO05D003631 1.3e-51 206.8 167 71.9
vmacro14291 Vaccinium macrocarpon HOM05D003237 ORTHO05D003631 1.3e-51 206.8 234 55.1
MELO3C015627.2 Cucumis melo HOM05D003237 ORTHO05D003631 1.7e-51 206.5 172 67.4
CsaV3_1G042090 Cucumis sativus L. HOM05D003237 ORTHO05D003631 1.7e-51 206.5 172 67.4
Solyc01g009090.3 Solanum lycopersicum HOM05D003237 ORTHO05D003631 1.7e-51 206.5 172 69.2
Thecc.09G337100 Theobroma cacao HOM05D003237 ORTHO05D003631 1.7e-51 206.5 173 66.5
Gohir.D13G235500 Gossypium hirsutum HOM05D003237 ORTHO05D003631 2.2e-51 206.1 173 66.5
Sopen01g004580 Solanum pennellii HOM05D003237 ORTHO05D003631 2.2e-51 206.1 172 69.2
CAN.G651.1 Capsicum annuum HOM05D003237 ORTHO05D003631 6.3e-51 204.5 172 68.6
Gohir.A13G230000 Gossypium hirsutum HOM05D003237 ORTHO05D003631 6.3e-51 204.5 173 65.9
Cpa.g.sc103.67 Carica papaya HOM05D003237 ORTHO05D003631 3.1e-50 202.2 171 66.7
Eucgr.J00624 Eucalyptus grandis HOM05D003237 ORTHO05D003631 9.1e-50 200.7 172 66.3
HanXRQChr13g0420901 Helianthus annuus HOM05D003237 ORTHO05D003631 9.1e-50 200.7 170 66.5
TWI79G1622 Tripterygium wilfordii HOM05D003237 ORTHO05D003631 2.0e-49 199.5 173 69.4
Manes.04G052501 Manihot esculenta HOM05D003237 ORTHO05D003631 3.4e-49 198.7 172 65.1
TWI31G0528 Tripterygium wilfordii HOM05D003237 ORTHO05D003631 4.5e-49 198.4 173 68.8
Manes.11G111400 Manihot esculenta HOM05D003237 ORTHO05D003631 5.9e-49 198.0 172 65.7
PGR119G2033 Punica granatum HOM05D003237 ORTHO05D003631 7.7e-49 197.6 172 66.3
MSTRG.12411 Avicennia marina HOM05D003237 ORTHO05D003631 1.3e-48 196.8 172 68.0
QL01p020379 Quercus lobata HOM05D003237 ORTHO05D003631 2.9e-48 195.7 220 53.2
Gorai.009G104900 Gossypium raimondii HOM05D003237 ORTHO05D003631 1.4e-47 193.4 173 64.2
MSTRG.17661 Avicennia marina HOM05D003237 ORTHO05D003631 1.9e-47 193.0 172 65.7
Ciclev10014331m.g Citrus clementina HOM05D003237 ORTHO05D003631 1.9e-47 193.0 173 63.6
HanXRQChr03g0091691 Helianthus annuus HOM05D003237 ORTHO05D003631 5.5e-47 191.4 170 62.9
Gohir.D05G100800 Gossypium hirsutum HOM05D003237 ORTHO05D003631 7.2e-47 191.0 173 63.6
Gohir.A05G101000 Gossypium hirsutum HOM05D003237 ORTHO05D003631 9.4e-47 190.7 173 63.6
Oeu026659.2 Olea europaea HOM05D003237 ORTHO05D003631 1.6e-46 189.9 170 67.1
Cc01_g07580 Coffea canephora HOM05D003237 ORTHO05D003631 2.1e-46 189.5 136 76.5
EL10Ac7g16220 Beta vulgaris HOM05D003237 ORTHO05D003631 1.4e-45 186.8 171 65.5
SGA_v2.0_scaffold79G25511 Striga asiatica HOM05D003237 ORTHO05D003631 6.7e-45 184.5 172 62.2
TAR633G2621 Trochodendron aralioides HOM05D003237 ORTHO05D003631 6.7e-45 184.5 176 61.4
Atru.chr3.3010 Acer truncatum HOM05D003237 ORTHO05D003631 1.5e-44 183.3 173 63.0
MD00G1031700 Malus domestica HOM05D003237 ORTHO05D003631 3.3e-44 182.2 172 59.9
Ah.15g099440 Amaranthus hybridus HOM05D003237 ORTHO05D003631 4.4e-44 181.8 172 63.4
Gorai.004G001800 Gossypium raimondii HOM05D003237 ORTHO05D003631 9.7e-44 180.6 163 63.8
Sed0018000 Sechium edule HOM05D003237 ORTHO05D003631 9.7e-44 180.6 172 64.0
Gohir.D08G008600 Gossypium hirsutum HOM05D003237 ORTHO05D003631 2.2e-43 179.5 163 63.8
AUR62001612 Chenopodium quinoa HOM05D003237 ORTHO05D003631 3.7e-43 178.7 172 62.2
Aqoxy2G00072 Aquilegia oxysepala HOM05D003237 ORTHO05D003631 4.8e-43 178.3 176 58.5
Migut.D00714 Erythranthe guttata HOM05D003237 ORTHO05D003631 8.2e-43 177.6 162 65.4
Hund20982 Selenicereus undatus HOM05D003237 ORTHO05D003631 3.1e-42 175.6 171 60.2
Peaxi162Scf00342g00121 Petunia axillaris HOM05D003237 ORTHO05D003631 7.0e-42 174.5 136 71.3
THA.LOC104816965 Tarenaya hassleriana HOM05D003237 ORTHO05D003631 7.0e-42 174.5 172 59.3
THA.LOC104801503 Tarenaya hassleriana HOM05D003237 ORTHO05D003631 1.2e-41 173.7 173 59.5
Haze_23662 Corylus avellana HOM05D003237 ORTHO05D003631 4.5e-41 171.8 172 58.7
Gohir.A08G000080 Gossypium hirsutum HOM05D003237 ORTHO05D003631 2.2e-40 169.5 165 61.2
SGA_v2.0_scaffold16G07569 Striga asiatica HOM05D003237 ORTHO05D003631 3.8e-40 168.7 172 60.5
ATR0618G315 Amborella trichopoda HOM05D003237 ORTHO05D003631 6.5e-40 167.9 178 59.0
CiPaw.13G047600 Carya illinoinensis HOM05D003237 ORTHO05D003631 1.9e-39 166.4 175 58.3
Glyma.04G128800 Glycine max HOM05D003237 ORTHO05D003631 1.9e-39 166.4 172 58.7
Glyma.06G314900 Glycine max HOM05D003237 ORTHO05D003631 3.2e-39 165.6 172 58.1
Lsat_1_v5_gn_3_116081 Lactuca sativa HOM05D003237 ORTHO05D003631 4.2e-39 165.2 139 66.9
Duzib150G1090 Durio zibethinus HOM05D003237 ORTHO05D003631 1.6e-38 163.3 134 65.7
CAN.G65.214 Capsicum annuum HOM05D003237 ORTHO05D003631 2.7e-38 162.5 172 59.9
Cfa010439 Carpinus fangiana HOM05D003237 ORTHO05D003631 3.6e-38 162.2 176 56.2
TAR636G1985 Trochodendron aralioides HOM05D003237 ORTHO05D003631 3.6e-38 162.2 166 57.2
Gohir.A08G196300 Gossypium hirsutum HOM05D003237 ORTHO05D003631 4.7e-38 161.8 134 67.2
Haze_03397 Corylus avellana HOM05D003237 ORTHO05D003631 8.0e-38 161.0 176 55.7
CDE02G2326 Ceratophyllum demersum HOM05D003237 ORTHO05D003631 1.0e-37 160.6 174 58.6
VMungo1127G0582 Vigna mungo HOM05D003237 ORTHO05D003631 1.8e-37 159.8 169 57.4
Migut.N02418 Erythranthe guttata HOM05D003237 ORTHO05D003631 2.3e-37 159.5 171 57.9
Gohir.D08G213400 Gossypium hirsutum HOM05D003237 ORTHO05D003631 3.0e-37 159.1 134 65.7
Gorai.004G227500 Gossypium raimondii HOM05D003237 ORTHO05D003631 3.0e-37 159.1 134 65.7
AUR62020168 Chenopodium quinoa HOM05D003237 ORTHO05D003631 5.2e-37 158.3 181 56.4
Haze_03393 Corylus avellana HOM05D003237 ORTHO05D003631 1.1e-36 157.1 173 54.9
Peaxi162Scf00526g00069 Petunia axillaris HOM05D003237 ORTHO05D003631 2.0e-36 156.4 168 57.7
Lalb_Chr03g0032411 Lupinus albus HOM05D003237 ORTHO05D003631 2.6e-36 156.0 171 57.3
Phvul.011G187000 Phaseolus vulgaris HOM05D003237 ORTHO05D003631 2.6e-36 156.0 169 57.4
GSVIVG01027348001 Vitis vinifera HOM05D003237 ORTHO05D003631 3.3e-36 155.6 173 56.1
THA.LOC104826477 Tarenaya hassleriana HOM05D003237 ORTHO05D003631 5.7e-36 154.8 169 55.0
Gorai.013G266200 Gossypium raimondii HOM05D003237 ORTHO05D003631 9.7e-36 154.1 173 55.5
PSO339G2307 Papaver somniferum HOM05D003237 ORTHO05D003631 9.7e-36 154.1 190 55.8
PSO384G0529 Papaver somniferum HOM05D003237 ORTHO05D003631 9.7e-36 154.1 190 55.8
unitig_27.g25020 Utricularia gibba HOM05D003237 ORTHO05D003631 1.3e-35 153.7 149 65.1
Lj3g0010266 Lotus japonicus HOM05D003237 ORTHO05D003631 2.2e-35 152.9 173 55.5
arahy.Tifrunner.gnm1.ann1.MWA09F Arachis hypogaea HOM05D003237 ORTHO05D003631 2.8e-35 152.5 170 57.1
Lalb_Chr19g0132581 Lupinus albus HOM05D003237 ORTHO05D003631 3.7e-35 152.1 160 57.5
Hund18830 Selenicereus undatus HOM05D003237 ORTHO05D003631 4.8e-35 151.8 171 57.9
Ah.08g222820 Amaranthus hybridus HOM05D003237 ORTHO05D003631 6.3e-35 151.4 172 57.0
Medtr3g006760 Medicago truncatula HOM05D003237 ORTHO05D003631 1.4e-34 150.2 171 54.4
Lalb_Chr15g0079371 Lupinus albus HOM05D003237 ORTHO05D003631 2.4e-34 149.4 173 55.5
Psat4g168160 Pisum sativum HOM05D003237 ORTHO05D003631 5.3e-34 148.3 172 53.5
VMungo1080G0204 Vigna mungo HOM05D003237 ORTHO05D003631 9.1e-34 147.5 170 57.6
Ca_24120_v3 Cicer arietinum L. HOM05D003237 ORTHO05D003631 1.6e-33 146.7 169 55.0
Lj1A274G37 Lonicera japonica HOM05D003237 ORTHO05D003631 1.6e-33 146.7 136 64.7
unitig_699.g19168 Utricularia gibba HOM05D003237 ORTHO05D003631 2.0e-33 146.4 164 57.3
QL04p050672 Quercus lobata HOM05D003237 ORTHO05D003631 2.7e-33 146.0 178 52.8
Duzib168G1536 Durio zibethinus HOM05D003237 ORTHO05D003631 4.5e-33 145.2 152 57.2
Medtr8g043980 Medicago truncatula HOM05D003237 ORTHO05D003631 5.9e-33 144.8 171 55.0
Aa31LG5G8480 Aethionema arabicum HOM05D003237 ORTHO05D003631 1.0e-32 144.1 137 62.8
CANSAT56G4085 Cannabis sativa HOM05D003237 ORTHO05D003631 2.2e-32 142.9 168 54.2
Sp4g09790 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.2e-32 142.9 174 54.0
SpUn0012_0040 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.2e-32 142.9 174 54.0
Ca_30267_v3 Cicer arietinum L. HOM05D003237 ORTHO05D003631 2.9e-32 142.5 172 53.5
Ca_14021_v3 Cicer arietinum L. HOM05D003237 ORTHO05D003631 3.8e-32 142.1 171 53.2
SEGI_16115 Sequoiadendron giganteum HOM05D003237 ORTHO05D003631 3.8e-32 142.1 185 54.6
Glyma.08G227300 Glycine max HOM05D003237 ORTHO05D003631 6.5e-32 141.4 169 53.3
Zm00001eb226730 Zea mays HOM05D003237 ORTHO05D003631 1.1e-31 140.6 175 50.9
Zm00001eb273040 Zea mays HOM05D003237 ORTHO05D003631 1.1e-31 140.6 175 51.4
AL4G20790 Arabidopsis lyrata HOM05D003237 ORTHO05D003631 1.5e-31 140.2 175 53.7
TPR.G25034 Trifolium pratense HOM05D003237 ORTHO05D003631 1.5e-31 140.2 170 51.8
arahy.Tifrunner.gnm1.ann1.F9X6AJ Arachis hypogaea HOM05D003237 ORTHO05D003631 2.5e-31 139.4 177 52.5
Carub.0004s0759 Capsella rubella HOM05D003237 ORTHO05D003631 4.2e-31 138.7 174 54.0
Thhalv10001921m.g Eutrema salsugineum HOM05D003237 ORTHO05D003631 4.2e-31 138.7 174 54.0
AL4G20820 Arabidopsis lyrata HOM05D003237 ORTHO05D003631 1.2e-30 137.1 173 54.3
Thhalv10001919m.g Eutrema salsugineum HOM05D003237 ORTHO05D003631 1.6e-30 136.7 174 53.4
Sp4g09770 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0012_0060 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0093_0010 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0093_0020 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0105_0010 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0105_0020 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0154_0010 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
SpUn0154_0020 Schrenkiella parvula HOM05D003237 ORTHO05D003631 2.1e-30 136.3 174 52.3
BcaB02g10072 Brassica carinata HOM05D003237 ORTHO05D003631 4.7e-30 135.2 173 52.0
Oeu022227.1 Olea europaea HOM05D003237 ORTHO05D003631 4.7e-30 135.2 108 71.3
BcaB01g03049 Brassica carinata HOM05D003237 ORTHO05D003631 1.4e-29 133.7 175 50.9
Psat5g230400 Pisum sativum HOM05D003237 ORTHO05D003631 1.4e-29 133.7 173 51.4
A04p20580 Brassica napus HOM05D003237 ORTHO05D003631 5.2e-29 131.7 174 52.9
C04p56360 Brassica napus HOM05D003237 ORTHO05D003631 5.2e-29 131.7 174 52.9
BraA04t17633Z Brassica rapa HOM05D003237 ORTHO05D003631 5.2e-29 131.7 174 52.9
AT2G27100 Arabidopsis thaliana HOM05D003237 ORTHO05D003631 8.8e-29 131.0 174 52.9
TPR.G25518 Trifolium pratense HOM05D003237 ORTHO05D003631 1.2e-28 130.6 129 59.7
BcaB06g28111 Brassica carinata HOM05D003237 ORTHO05D003631 1.5e-28 130.2 174 54.0
Sc06g0008520 Simmondsia chinensis HOM05D003237 ORTHO05D003631 1.5e-28 130.2 174 52.9
Phvul.005G010800 Phaseolus vulgaris HOM05D003237 ORTHO05D003631 2.0e-28 129.8 174 50.6
BcaC02g08283 Brassica carinata HOM05D003237 ORTHO05D003631 4.4e-28 128.6 174 53.4
BolC4t27166H Brassica oleracea HOM05D003237 ORTHO05D003631 4.4e-28 128.6 174 53.4
HPP92_015378 Vanilla planifolia HOM05D003237 ORTHO05D003631 5.7e-28 128.3 175 47.4
Carub.0004s0762 Capsella rubella HOM05D003237 ORTHO05D003631 6.3e-27 124.8 174 52.3
Psat2g029240 Pisum sativum HOM05D002119 ORTHO05D003631 2.4e-26 122.9 113 57.5
Zm00001eb174730 Zea mays HOM05D003237 ORTHO05D003631 3.1e-26 122.5 147 50.3
Os06g0698859 Oryza sativa ssp. japonica HOM05D003237 ORTHO05D003631 4.1e-26 122.1 158 47.5
Zm00001eb035820 Zea mays HOM05D003237 ORTHO05D003631 1.2e-25 120.6 171 49.1
PSO675G8789 Papaver somniferum HOM05D003237 ORTHO05D003631 1.6e-25 120.2 187 49.7
A07p17990 Brassica napus HOM05D003237 ORTHO05D003631 2.0e-25 119.8 173 49.1
BraA07t29518Z Brassica rapa HOM05D003237 ORTHO05D003631 2.0e-25 119.8 173 49.1
BcaC02g10857 Brassica carinata HOM05D003237 ORTHO05D003631 1.7e-24 116.7 174 49.4
C04p24400 Brassica napus HOM05D003237 ORTHO05D003631 1.7e-24 116.7 174 49.4
BolC4t23937H Brassica oleracea HOM05D003237 ORTHO05D003631 1.7e-24 116.7 174 49.4
Pp3c25_7680 Physcomitrium patens HOM05D003237 ORTHO05D003631 3.0e-21 105.9 146 48.6
Aa31LG5G8490 Aethionema arabicum HOM05D003237 ORTHO05D003631 4.0e-21 105.5 144 51.4
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 6.8e-21 104.8 196 43.4
Pp3c16_11390 Physcomitrium patens HOM05D003237 ORTHO05D003631 6.8e-21 104.8 153 46.4
SMO118G0495 Selaginella moellendorffii HOM05D003237 ORTHO05D003631 5.4e-18 95.1 183 42.6
Mapoly0065s0067 Marchantia polymorpha HOM05D003237 ORTHO05D003631 2.0e-17 93.2 188 41.5
CARHR119470 Cardamine hirsuta HOM05D003237 ORTHO05D003631 5.7e-12 75.1 88 56.8
CiPaw.14G037800 Carya illinoinensis HOM05D003237 ORTHO05D003631 1.6e-06 57.0 82 50.0


User provided reference genes

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