Gene: Cc01_g07580

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc01_g07580
  • Transcript Identifier Cc01_g07580.1
  • Gene Type Coding gene
  • Location chr1 : 25540845-25550602 : positive

Gene Family Information

  • ID HOM05D003237
  • #Genes/#Species 212/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9ZVD0
  • UniProtKB D7T1I0
  • UniProtKB A5ALP0
  • UniProtKB B4J497
  • UniProtKB B9S6M6
  • UniProtKB B4MR46
  • id GSCOCG00009380001

Descriptions

  • Description Serrate RNA effector molecule
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT2G27100
GO:0048509
ISO
PLAZA Integrative Orthologyregulation of meristem development AT2G27100
GO:0031053
ISO
PLAZA Integrative Orthologyprimary miRNA processing AT2G27100
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G27100
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT2G27100
GO:0000381
ISO
PLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosome AT2G27100
GO:2000011
ISO
PLAZA Integrative Orthologyregulation of adaxial/abaxial pattern formation AT2G27100
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT2G27100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G27100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT2G27100
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G27100
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G27100
GO:0005846
ISO
PLAZA Integrative Orthologynuclear cap binding complex AT2G27100
GO:0010445
ISO
PLAZA Integrative Orthologynuclear dicing body AT2G27100
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G27100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021933 SERRATE/Ars2, N-terminal
IPR039727 SERRATE/Ars2
IPR007042 SERRATE/Ars2 , C-terminal
Mapman id Description
16.9.2.1.3 RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component SERRATE