Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030964 Daucus carota HOM05D001495 ORTHO05D030940 9.1e-40 166.4 81 100.0
DCAR_026991 Daucus carota HOM05D001495 ORTHO05D001391 4.3e-29 131.0 68 92.6
Atru.chr4.3048 Acer truncatum HOM05D001495 ORTHO05D001391 3.2e-16 88.2 72 54.2
Dinv44266 Davidia involucrata HOM05D001495 ORTHO05D001391 4.6e-15 84.3 66 57.6
CSS0010886 Camellia sinensis var. sinensis HOM05D001495 ORTHO05D001391 1.7e-14 82.4 65 58.5
Dinv15145 Davidia involucrata HOM05D001495 ORTHO05D001391 3.9e-14 81.3 66 57.6
VMungo1215G2798 Vigna mungo HOM05D001495 ORTHO05D001391 1.9e-13 79.0 69 53.6
FvH4_4g20210 Fragaria vesca HOM05D001495 ORTHO05D001391 3.3e-13 78.2 68 54.4
FAN07G0514 Fragaria x ananassa HOM05D001495 ORTHO05D001391 3.3e-13 78.2 68 54.4
FAN12G3734 Fragaria x ananassa HOM05D001495 ORTHO05D001391 3.3e-13 78.2 68 54.4
Phvul.003G116400 Phaseolus vulgaris HOM05D001495 ORTHO05D001391 3.3e-13 78.2 68 54.4
RcHm_v2.0_Chr4g0425821 Rosa chinensis HOM05D001495 ORTHO05D001391 4.3e-13 77.8 68 52.9
vmacro15174 Vaccinium macrocarpon HOM05D001495 ORTHO05D001391 4.3e-13 77.8 66 53.0
Lj6A693T65 Lonicera japonica HOM05D001495 ORTHO05D001391 5.6e-13 77.4 69 56.5
AUR62039258 Chenopodium quinoa HOM05D001495 ORTHO05D001391 1.6e-12 75.9 68 50.0
Lj4g0013859 Lotus japonicus HOM05D001495 ORTHO05D001391 2.1e-12 75.5 71 50.7
AUR62016232 Chenopodium quinoa HOM05D001495 ORTHO05D001391 3.6e-12 74.7 68 48.5
Prupe.1G114600 Prunus persica HOM05D001495 ORTHO05D001391 3.6e-12 74.7 68 57.4
CiPaw.02G073400 Carya illinoinensis HOM05D001495 ORTHO05D001391 8.1e-12 73.6 69 50.7
ECA233G5661 Erigeron canadensis HOM05D001495 ORTHO05D001391 1.1e-11 73.2 71 54.9
Cfa015287 Carpinus fangiana HOM05D001495 ORTHO05D001391 1.4e-11 72.8 66 56.1
HanXRQChr13g0395241 Helianthus annuus HOM05D001495 ORTHO05D001391 1.4e-11 72.8 68 55.9
Ca_21427_v3 Cicer arietinum L. HOM05D001495 ORTHO05D001391 2.3e-11 72.0 68 48.5
Hma1.2p1_0078F.1_g039900 Hydrangea macrophylla HOM05D001495 ORTHO05D001391 2.3e-11 72.0 68 48.5
Glyma.07G237900 Glycine max HOM05D001495 ORTHO05D001391 4.0e-11 71.2 70 52.9
ATR0800G063 Amborella trichopoda HOM05D001495 ORTHO05D001391 5.2e-11 70.9 68 51.5
Nn4g25557 Nelumbo nucifera HOM05D001495 ORTHO05D001391 6.8e-11 70.5 66 50.0
arahy.Tifrunner.gnm1.ann1.ZU7UIY Arachis hypogaea HOM05D001495 ORTHO05D001391 1.2e-10 69.7 68 50.0
CSS0023330 Camellia sinensis var. sinensis HOM05D001495 ORTHO05D001391 1.2e-10 69.7 65 49.2
Duzib151G0245 Durio zibethinus HOM05D001495 ORTHO05D001391 1.2e-10 69.7 66 54.5
CANSAT11G1739 Cannabis sativa HOM05D001495 ORTHO05D001391 2.6e-10 68.6 66 50.0
Glyma.17G035500 Glycine max HOM05D001495 ORTHO05D001391 2.6e-10 68.6 71 49.3
Aqoxy6G02578 Aquilegia oxysepala HOM05D001495 ORTHO05D001391 3.4e-10 68.2 68 54.4
QL06p012773 Quercus lobata HOM05D001495 ORTHO05D001391 3.4e-10 68.2 68 45.6
ClCG06G004470 Citrullus lanatus HOM05D001495 ORTHO05D001391 4.4e-10 67.8 66 50.0
Eucgr.H04064 Eucalyptus grandis HOM05D001495 ORTHO05D001391 7.5e-10 67.0 71 45.1
Nitab4.5_0009057g0010 Nicotiana tabacum HOM05D001495 ORTHO05D001391 7.5e-10 67.0 66 51.5
TWI73G1144 Tripterygium wilfordii HOM05D001495 ORTHO05D001391 7.5e-10 67.0 66 45.5
TAR636G2324 Trochodendron aralioides HOM05D001495 ORTHO05D001391 7.5e-10 67.0 66 48.5
Aa31LG10G5840 Aethionema arabicum HOM05D001495 ORTHO05D001391 9.9e-10 66.6 66 50.0
MELO3C021258.2 Cucumis melo HOM05D001495 ORTHO05D001391 9.9e-10 66.6 66 50.0
Actinidia14253 Actinidia chinensis HOM05D001495 ORTHO05D001391 1.3e-09 66.2 65 46.2
Lalb_Chr13g0298581 Lupinus albus HOM05D001495 ORTHO05D001391 1.3e-09 66.2 60 55.0
MD13G1150500 Malus domestica HOM05D001495 ORTHO05D001391 1.3e-09 66.2 68 47.1
Manes.03G206500 Manihot esculenta HOM05D001495 ORTHO05D001391 1.3e-09 66.2 66 50.0
Sp7g14810 Schrenkiella parvula HOM05D001495 ORTHO05D001391 1.3e-09 66.2 75 52.0
arahy.Tifrunner.gnm1.ann1.TK9WZW Arachis hypogaea HOM05D001495 ORTHO05D001391 1.7e-09 65.9 72 48.6
CsaV3_6G028500 Cucumis sativus L. HOM05D001495 ORTHO05D001391 1.7e-09 65.9 66 50.0
Oeu001158.2 Olea europaea HOM05D001495 ORTHO05D001391 1.7e-09 65.9 66 50.0
Sabra10G0114000 Salix brachista HOM05D001495 ORTHO05D001391 1.7e-09 65.9 61 54.1
Ciclev10006924m.g Citrus clementina HOM05D001495 ORTHO05D001391 2.2e-09 65.5 66 48.5
Potri.010G147900 Populus trichocarpa HOM05D001495 ORTHO05D001391 2.9e-09 65.1 61 55.7
Cc03_g00650 Coffea canephora HOM05D001495 ORTHO05D001391 3.7e-09 64.7 66 50.0
Solyc01g058450.3 Solanum lycopersicum HOM05D001495 ORTHO05D001391 3.7e-09 64.7 68 48.5
Sopen01g024010 Solanum pennellii HOM05D001495 ORTHO05D001391 3.7e-09 64.7 68 48.5
Lalb_Chr07g0181991 Lupinus albus HOM05D001495 ORTHO05D001391 4.9e-09 64.3 66 48.5
Sed0003150 Sechium edule HOM05D001495 ORTHO05D001391 4.9e-09 64.3 66 50.0
Actinidia13351 Actinidia chinensis HOM05D001495 ORTHO05D001391 6.4e-09 63.9 61 45.9
Hund11986 Selenicereus undatus HOM05D001495 ORTHO05D001391 6.4e-09 63.9 67 44.8
CDE05G1131 Ceratophyllum demersum HOM05D001495 ORTHO05D001391 8.3e-09 63.5 56 51.8
Psat4g021880 Pisum sativum HOM05D001495 ORTHO05D001391 8.3e-09 63.5 68 44.1
SGA_v2.0_scaffold157G37332 Striga asiatica HOM05D001495 ORTHO05D001391 8.3e-09 63.5 68 51.5
PGR004G1092 Punica granatum HOM05D001495 ORTHO05D001391 1.1e-08 63.2 37 70.3
CAN.G114.5 Capsicum annuum HOM05D001495 ORTHO05D001391 1.4e-08 62.8 66 48.5
CDE02G3065 Ceratophyllum demersum HOM05D001495 ORTHO05D001391 1.4e-08 62.8 65 50.8
Nitab4.5_0000177g0070 Nicotiana tabacum HOM05D001495 ORTHO05D001391 1.4e-08 62.8 66 51.5
Peaxi162Scf00228g00515 Petunia axillaris HOM05D001495 ORTHO05D001391 1.4e-08 62.8 66 51.5
TPR.G25425 Trifolium pratense HOM05D001495 ORTHO05D001391 1.4e-08 62.8 68 42.6
Sc25g0003200 Simmondsia chinensis HOM05D001495 ORTHO05D001391 1.9e-08 62.4 54 51.9
EL10Ac3g05531 Beta vulgaris HOM05D001495 ORTHO05D001391 2.4e-08 62.0 68 47.1
Manes.15G001500 Manihot esculenta HOM05D001495 ORTHO05D001391 2.4e-08 62.0 64 46.9
Nn3g21739 Nelumbo nucifera HOM05D001495 ORTHO05D001391 2.4e-08 62.0 40 67.5
Thecc.04G304200 Theobroma cacao HOM05D001495 ORTHO05D001391 3.2e-08 61.6 47 61.7
PSO421G0756 Papaver somniferum HOM05D001495 ORTHO05D001391 4.1e-08 61.2 76 42.1
PSO673G0031 Papaver somniferum HOM05D001495 ORTHO05D001391 4.1e-08 61.2 76 42.1
Carub.0007s2523 Capsella rubella HOM05D001495 ORTHO05D001391 5.4e-08 60.8 66 47.0
Lsat_1_v5_gn_6_261 Lactuca sativa HOM05D001495 ORTHO05D001391 5.4e-08 60.8 26 92.3
Medtr4g122650 Medicago truncatula HOM05D001495 ORTHO05D001391 5.4e-08 60.8 68 44.1
BcaC09g50326 Brassica carinata HOM05D001495 ORTHO05D001391 7.1e-08 60.5 66 50.0
A01p21280 Brassica napus HOM05D001495 ORTHO05D001391 7.1e-08 60.5 66 50.0
C01p26620 Brassica napus HOM05D001495 ORTHO05D001391 7.1e-08 60.5 66 50.0
BolC1t02603H Brassica oleracea HOM05D001495 ORTHO05D001391 7.1e-08 60.5 66 50.0
BraA01t02035Z Brassica rapa HOM05D001495 ORTHO05D001391 7.1e-08 60.5 66 50.0
Os09g0123200 Oryza sativa ssp. japonica HOM05D001495 ORTHO05D001391 7.1e-08 60.5 57 59.6
Ah.13g071430 Amaranthus hybridus HOM05D001495 ORTHO05D001391 9.2e-08 60.1 66 45.5
CARHR222670 Cardamine hirsuta HOM05D001495 ORTHO05D001391 1.2e-07 59.7 74 43.2
Thhalv10024390m.g Eutrema salsugineum HOM05D001495 ORTHO05D001391 1.2e-07 59.7 66 51.5
Nn5g28684 Nelumbo nucifera HOM05D001495 ORTHO05D001391 1.2e-07 59.7 66 45.5
Oeu027342.1 Olea europaea HOM05D001495 ORTHO05D001391 1.2e-07 59.7 69 46.4
PSO724G0940 Papaver somniferum HOM05D001495 ORTHO05D001391 1.2e-07 59.7 74 41.9
MD16G1150700 Malus domestica HOM05D001495 ORTHO05D001391 1.6e-07 59.3 68 45.6
BcaNung00209 Brassica carinata HOM05D001495 ORTHO05D001391 2.1e-07 58.9 66 50.0
SEGI_15924 Sequoiadendron giganteum HOM05D001495 ORTHO05D001391 2.1e-07 58.9 59 50.8
Duzib212G0382 Durio zibethinus HOM05D001495 ORTHO05D001391 2.7e-07 58.5 66 48.5
THA.LOC104820311 Tarenaya hassleriana HOM05D001495 ORTHO05D001391 2.7e-07 58.5 66 43.9
Actinidia19074 Actinidia chinensis HOM05D001495 ORTHO05D030940 3.5e-07 58.2 65 43.1
SEGI_21142 Sequoiadendron giganteum HOM05D001495 ORTHO05D001391 4.6e-07 57.8 68 47.1
THA.LOC104821799 Tarenaya hassleriana HOM05D001495 ORTHO05D001391 4.6e-07 57.8 66 43.9
AT4G16280 Arabidopsis thaliana HOM05D001495 ORTHO05D001391 7.8e-07 57.0 74 41.9
GSVIVG01034966001 Vitis vinifera HOM05D001495 ORTHO05D001391 7.8e-07 57.0 27 77.8
vmacro02387 Vaccinium macrocarpon HOM05D001495 ORTHO05D001391 1.0e-06 56.6 63 41.3
COL.COLO4_34585 Corchorus olitorius HOM05D001495 ORTHO05D001391 1.3e-06 56.2 64 46.9
Mapoly0009s0245 Marchantia polymorpha HOM05D001495 ORTHO05D001391 1.3e-06 56.2 28 75.0
Actinidia21385 Actinidia chinensis HOM05D001495 ORTHO05D001391 1.7e-06 55.8 64 42.2
HPP92_020088 Vanilla planifolia HOM05D001495 ORTHO05D001391 2.3e-06 55.5 68 45.6
Gohir.A10G173900 Gossypium hirsutum HOM05D001495 ORTHO05D001391 3.9e-06 54.7 66 45.5
Hma1.2p1_0408F.1_g146520 Hydrangea macrophylla HOM05D001495 ORTHO05D001391 3.9e-06 54.7 61 44.3
Ciclev10019644m.g Citrus clementina HOM05D001495 ORTHO05D001391 5.1e-06 54.3 64 43.8
Nn5g28488 Nelumbo nucifera HOM05D001495 ORTHO05D001391 5.1e-06 54.3 38 60.5
SGA_v2.0_scaffold64G22100 Striga asiatica HOM05D001495 ORTHO05D001391 5.1e-06 54.3 56 48.2
Zm00001eb095560 Zea mays HOM05D001495 ORTHO05D001391 5.1e-06 54.3 30 76.7
Gorai.011G201900 Gossypium raimondii HOM05D001495 ORTHO05D001391 6.6e-06 53.9 66 45.5
CSS0029739 Camellia sinensis var. sinensis HOM05D001495 ORTHO05D001391 8.6e-06 53.5 65 46.2
Dinv33135 Davidia involucrata HOM05D001495 ORTHO05D001391 8.6e-06 53.5 65 43.1
Gohir.D10G180400 Gossypium hirsutum HOM05D001495 ORTHO05D001391 8.6e-06 53.5 66 45.5


User provided reference genes

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