Gene: Os09g0123200

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os09g0123200
  • Transcript Identifier Os09t0123200-01
  • Gene Type Coding gene
  • Location chr09 : 1790726-1798751 : positive

Gene Family Information

  • ID HOM05D001495
  • #Genes/#Species 424/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os09t0123200-01
  • MSU-ID LOC_Os09g03610.1
  • MSU-ID LOC_Os09g03610.2
  • MSU-ID LOC_Os09g03610.3
  • MSU-ID LOC_Os09g03610.4
  • symbol OsFCA
  • uniprot Q6K271

Descriptions

  • Description FCA-like protein, FCA gamma protein, Flowering time related protein involved in autonomous flowering pathway
  • Description Similar to Flowering time control protein isoform OsFCA-1.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031048
ISO
PLAZA Integrative Orthologyheterochromatin assembly by small RNA AT4G16280
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT4G16280
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G16280
GO:0048026
IBA
GOA Databasepositive regulation of mRNA splicing, via spliceosome
GO:0008361
IMP
GOA Databaseregulation of cell size
GO:0009909
IMP
ISS
GOA Databaseregulation of flower development
GO:0048510
IMP
GOA Databaseregulation of timing of transition from vegetative to reproductive phase
GO:0080113
IMP
GOA Databaseregulation of seed growth
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009908
IEA
GOA Databaseflower development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010427
ISO
PLAZA Integrative Orthologyabscisic acid binding AT4G16280
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G47310
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IPI
GOA Databaseprotein binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IBA
GOA Databasespliceosomal complex
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT4G16280
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT4G16280
GO:1990904
IEA
GOA Databaseribonucleoprotein complex
GO:1990904
IEA
InterProribonucleoprotein complex
GO:0005634
IDA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001202 WW domain
IPR000504 RNA recognition motif domain
IPR036020 WW domain superfamily
IPR002343 Paraneoplastic encephalomyelitis antigen
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated