Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029051 Daucus carota HOM05D000104 ORTHO05D006311 4.6e-123 444.5 214 100.0
DCAR_029033 Daucus carota HOM05D000590 ORTHO05D006311 1.1e-97 360.1 182 95.6
Dinv23617 Davidia involucrata HOM05D000104 ORTHO05D006311 8.8e-58 227.6 210 58.6
Haze_10067 Corylus avellana HOM05D000104 ORTHO05D006311 1.8e-55 219.9 218 56.4
CSS0034041 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006311 1.0e-53 214.2 211 54.5
GSVIVG01031756001 Vitis vinifera HOM05D000104 ORTHO05D006311 3.8e-53 212.2 218 56.0
CSS0031251 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006311 5.0e-53 211.8 211 54.5
Actinidia27954 Actinidia chinensis HOM05D000104 ORTHO05D006311 8.5e-53 211.1 211 54.5
Lj5A209G69 Lonicera japonica HOM05D000104 ORTHO05D006311 1.5e-52 210.3 231 52.4
Cfa004510 Carpinus fangiana HOM05D000104 ORTHO05D006311 9.4e-52 207.6 219 55.3
MD05G1079700 Malus domestica HOM05D000104 ORTHO05D006311 1.2e-51 207.2 216 52.8
QL11p036019 Quercus lobata HOM05D000104 ORTHO05D006311 6.8e-50 201.4 218 53.7
FAN15G0367 Fragaria x ananassa HOM05D000104 ORTHO05D006311 1.5e-49 200.3 217 53.5
vmacro19498 Vaccinium macrocarpon HOM05D000104 ORTHO05D006311 7.5e-49 198.0 211 53.6
Prupe.8G123600 Prunus persica HOM05D000104 ORTHO05D006311 1.3e-48 197.2 215 51.6
FvH4_2g06200 Fragaria vesca HOM05D000104 ORTHO05D006311 2.8e-48 196.1 217 53.0
FAN24G2290 Fragaria x ananassa HOM05D000104 ORTHO05D006311 2.8e-48 196.1 217 53.0
Rhsim05G0083600 Rhododendron simsii HOM05D000104 ORTHO05D006311 3.7e-48 195.7 211 52.6
RcHm_v2.0_Chr6g0256991 Rosa chinensis HOM05D000104 ORTHO05D006311 4.9e-48 195.3 217 53.0
Nn5g30246 Nelumbo nucifera HOM05D000104 ORTHO05D006311 1.0e-45 187.6 217 50.7
Thecc.02G099700 Theobroma cacao HOM05D000104 ORTHO05D006311 1.1e-44 184.1 235 48.5
Potri.004G141500 Populus trichocarpa HOM05D000104 ORTHO05D006311 4.3e-44 182.2 217 52.1
Manes.07G082400 Manihot esculenta HOM05D000104 ORTHO05D006311 2.1e-43 179.9 217 49.3
CsaV3_3G018560 Cucumis sativus L. HOM05D000104 ORTHO05D006311 4.7e-43 178.7 219 49.3
CiPaw.05G006100 Carya illinoinensis HOM05D000104 ORTHO05D006311 6.1e-43 178.3 154 60.4
HanXRQChr16g0497611 Helianthus annuus HOM05D000104 ORTHO05D006311 1.4e-42 177.2 217 47.0
TAR628G1742 Trochodendron aralioides HOM05D000104 ORTHO05D006311 5.2e-42 175.3 190 54.2
Sed0008150 Sechium edule HOM05D000104 ORTHO05D006311 4.4e-41 172.2 215 49.8
TWI31G1026 Tripterygium wilfordii HOM05D000104 ORTHO05D006311 7.5e-41 171.4 218 50.5
Sabra04G0093400 Salix brachista HOM05D000104 ORTHO05D006311 6.4e-40 168.3 219 50.7
COL.COLO4_32665 Corchorus olitorius HOM05D000104 ORTHO05D006311 8.3e-40 167.9 235 42.1
Lalb_Chr05g0210731 Lupinus albus HOM05D000104 ORTHO05D006311 2.4e-39 166.4 214 47.7
Eucgr.G01447 Eucalyptus grandis HOM05D000104 ORTHO05D006311 3.2e-39 166.0 216 46.8
Hund00332 Selenicereus undatus HOM05D000104 ORTHO05D006311 3.2e-39 166.0 222 47.3
Duzib052G0677 Durio zibethinus HOM05D000104 ORTHO05D006311 4.1e-39 165.6 228 47.4
PSO210G6827 Papaver somniferum HOM05D000104 ORTHO05D006311 9.2e-39 164.5 219 47.5
Gohir.A13G039700 Gossypium hirsutum HOM05D000104 ORTHO05D006311 1.6e-38 163.7 234 47.9
MELO3C019510.2 Cucumis melo HOM05D000104 ORTHO05D006311 2.0e-38 163.3 234 45.3
Peaxi162Scf00152g00027 Petunia axillaris HOM05D000104 ORTHO05D006311 2.7e-38 162.9 236 44.9
MBI06_g36644_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D006311 5.9e-38 161.8 226 45.6
Aqoxy5G01249 Aquilegia oxysepala HOM05D000104 ORTHO05D006311 7.8e-38 161.4 214 47.7
Cc02_g18720 Coffea canephora HOM05D000104 ORTHO05D006311 7.8e-38 161.4 213 47.4
Gohir.D13G038400 Gossypium hirsutum HOM05D000104 ORTHO05D006311 1.0e-37 161.0 234 46.6
PSO170G2386 Papaver somniferum HOM05D000104 ORTHO05D006311 1.0e-37 161.0 219 46.6
Ciclev10027772m.g Citrus clementina HOM05D000104 ORTHO05D006311 1.7e-37 160.2 221 46.6
Nitab4.5_0004804g0040 Nicotiana tabacum HOM05D000104 ORTHO05D006311 1.7e-37 160.2 237 44.3
ECA234G1929 Erigeron canadensis HOM05D000104 ORTHO05D006311 5.0e-37 158.7 162 50.6
Nitab4.5_0000292g0040 Nicotiana tabacum HOM05D000104 ORTHO05D006311 1.5e-36 157.1 239 43.9
Sc18g0004040 Simmondsia chinensis HOM05D000104 ORTHO05D006311 2.5e-36 156.4 218 45.4
Oeu013703.1 Olea europaea HOM05D000104 ORTHO05D006311 3.3e-36 156.0 173 49.1
Gorai.013G043100 Gossypium raimondii HOM05D000104 ORTHO05D006311 3.6e-35 152.5 243 44.0
MSTRG.20152 Avicennia marina HOM05D000104 ORTHO05D006311 4.7e-35 152.1 212 42.9
PGR042G0253 Punica granatum HOM05D000104 ORTHO05D006311 1.4e-34 150.6 215 45.1
CAN.G46.36 Capsicum annuum HOM05D000104 ORTHO05D006311 2.3e-34 149.8 238 42.9
Glyma.01G244700 Glycine max HOM05D000104 ORTHO05D006311 4.0e-34 149.1 214 45.8
SalBow6G5855 Salvia bowleyana HOM05D000104 ORTHO05D006311 1.2e-33 147.5 182 45.6
Solyc04g056410.3 Solanum lycopersicum HOM05D000104 ORTHO05D006311 1.5e-33 147.1 240 42.1
AT3G19210 Arabidopsis thaliana HOM05D000104 ORTHO05D006311 2.6e-33 146.4 171 51.5
BcaB06g25977 Brassica carinata HOM05D000104 ORTHO05D006311 9.8e-33 144.4 127 59.8
ClCG05G010010 Citrullus lanatus HOM05D000104 ORTHO05D006311 9.8e-33 144.4 219 43.8
Aa31LG8G6000 Aethionema arabicum HOM05D000104 ORTHO05D006311 2.9e-32 142.9 215 42.8
Hund06178 Selenicereus undatus HOM05D000104 ORTHO05D006311 2.9e-32 142.9 115 60.0
AL3G32590 Arabidopsis lyrata HOM05D000104 ORTHO05D006311 6.4e-32 141.7 171 51.5
Migut.B00341 Erythranthe guttata HOM05D000104 ORTHO05D006311 8.3e-32 141.4 202 41.1
Sopen04g025310 Solanum pennellii HOM05D000104 ORTHO05D006311 8.3e-32 141.4 240 41.7
BraA05t21881Z Brassica rapa HOM05D000104 ORTHO05D006311 1.1e-31 141.0 150 53.3
SGA_v2.0_scaffold90G27664 Striga asiatica HOM05D000104 ORTHO05D006311 1.1e-31 141.0 211 42.2
C05p46030 Brassica napus HOM05D000104 ORTHO05D006311 1.4e-31 140.6 154 50.6
Thhalv10020013m.g Eutrema salsugineum HOM05D000104 ORTHO05D006311 1.4e-31 140.6 170 48.2
BcaC05g28523 Brassica carinata HOM05D000104 ORTHO05D006311 1.9e-31 140.2 215 42.8
BolC5t33330H Brassica oleracea HOM05D000104 ORTHO05D006311 1.9e-31 140.2 215 42.8
CARHR094620 Cardamine hirsuta HOM05D000104 ORTHO05D006311 1.9e-31 140.2 172 48.8
Lj1g0013867 Lotus japonicus HOM05D000104 ORTHO05D006311 2.4e-31 139.8 140 54.3
arahy.Tifrunner.gnm1.ann1.1287G1 Arachis hypogaea HOM05D000104 ORTHO05D006311 7.0e-31 138.3 211 44.1
A05p30430 Brassica napus HOM05D000104 ORTHO05D006311 7.0e-31 138.3 215 42.8
Carub.0003s1904 Capsella rubella HOM05D000104 ORTHO05D006311 9.2e-31 137.9 144 52.8
Phvul.002G054300 Phaseolus vulgaris HOM05D000104 ORTHO05D006311 1.2e-30 137.5 209 43.1
Lsat_1_v5_gn_5_112800 Lactuca sativa HOM05D000104 ORTHO05D006311 3.5e-30 136.0 210 42.4
Medtr5g004720 Medicago truncatula HOM05D000104 ORTHO05D006311 4.6e-30 135.6 214 41.6
Sp3g17280 Schrenkiella parvula HOM05D000104 ORTHO05D006311 6.0e-30 135.2 132 55.3
THA.LOC104809900 Tarenaya hassleriana HOM05D000104 ORTHO05D006311 2.3e-29 133.3 109 58.7
VMungo1215G3211 Vigna mungo HOM05D000104 ORTHO05D006311 3.0e-29 132.9 179 43.0
Ca_24337_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006311 3.9e-29 132.5 216 41.7
EL10Ac9g21836 Beta vulgaris HOM05D000104 ORTHO05D006311 6.6e-29 131.7 204 39.7
TPR.G21597 Trifolium pratense HOM05D000104 ORTHO05D006311 6.6e-29 131.7 152 49.3
Psat4g228280 Pisum sativum HOM05D000104 ORTHO05D006311 1.9e-28 130.2 152 49.3
HPP92_016725 Vanilla planifolia HOM05D000104 ORTHO05D006311 4.3e-28 129.0 140 49.3
unitig_0.g82 Utricularia gibba HOM05D004246 ORTHO05D006311 1.4e-26 124.0 168 44.0
SHI30983 Sapria himalayana HOM05D000104 ORTHO05D006311 4.0e-26 122.5 139 51.8
QL09p040364 Quercus lobata HOM05D000370 ORTHO05D001335 1.5e-25 120.6 98 61.2
CDE08G1277 Ceratophyllum demersum HOM05D000104 ORTHO05D006311 3.4e-25 119.4 223 39.5
AUR62011445 Chenopodium quinoa HOM05D000104 ORTHO05D006311 4.4e-25 119.0 220 39.5
Os02g0762800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D006311 1.3e-24 117.5 111 53.2
ATR0100G059 Amborella trichopoda HOM05D000104 ORTHO05D006311 2.2e-24 116.7 225 41.3
CDE06G0834 Ceratophyllum demersum HOM05D000104 ORTHO05D006311 3.7e-24 115.9 204 41.2
SEGI_21756 Sequoiadendron giganteum HOM05D000104 ORTHO05D006311 1.1e-23 114.4 132 45.5
AUR62016616 Chenopodium quinoa HOM05D000104 ORTHO05D006311 3.2e-23 112.8 206 39.3
AagrBONN_evm.TU.Sc2ySwM_228.1653 Anthoceros agrestis HOM05D000104 ORTHO05D006311 1.7e-21 107.1 115 43.5
Pp3c16_6690 Physcomitrium patens HOM05D000104 ORTHO05D006311 4.7e-19 99.0 109 45.9
SMO137G0183 Selaginella moellendorffii HOM05D000104 ORTHO05D006311 4.0e-18 95.9 93 46.2
CBR_g70715 Chara braunii HOM05D000104 ORTHO05D006311 1.2e-17 94.4 77 51.9
Pp3c5_12730 Physcomitrium patens HOM05D000104 ORTHO05D006311 3.4e-17 92.8 106 44.3
Cpa.g.sc62.19 Carica papaya HOM05D000104 ORTHO05D006311 3.4e-09 66.2 153 36.6
SHI05368 Sapria himalayana HOM05D000104 ORTHO05D006311 3.4e-09 66.2 75 45.3
Zm00001eb381850 Zea mays HOM05D000104 ORTHO05D006311 1.4e-07 60.8 40 62.5
Atru.chr5.2727 Acer truncatum HOM05D000104 ORTHO05D006311 6.0e-06 55.5 61 45.9
PRCOL_00002118 Prasinoderma coloniale HOM05D000104 ORTHO05D006311 7.8e-06 55.1 72 33.3


User provided reference genes

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