Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025365 Daucus carota HOM05D003501 ORTHO05D004388 5.1e-218 760.8 376 100.0
vmacro18212 Vaccinium macrocarpon HOM05D003501 ORTHO05D004388 2.0e-169 599.4 380 78.4
Hma1.2p1_0199F.1_g085800 Hydrangea macrophylla HOM05D003501 ORTHO05D004388 4.4e-169 598.2 380 77.6
CSS0017931 Camellia sinensis var. sinensis HOM05D003501 ORTHO05D004388 1.4e-167 593.2 380 76.6
Rhsim08G0066100 Rhododendron simsii HOM05D003501 ORTHO05D004388 2.4e-167 592.4 380 77.4
ECA232G0193 Erigeron canadensis HOM05D003501 ORTHO05D004388 5.9e-166 587.8 380 75.5
Lj2A610G28 Lonicera japonica HOM05D003501 ORTHO05D004388 7.7e-166 587.4 368 78.3
Dinv15534 Davidia involucrata HOM05D003501 ORTHO05D004388 2.2e-165 585.9 387 74.9
Cc07_g02990 Coffea canephora HOM05D003501 ORTHO05D004388 6.5e-165 584.3 380 75.0
Actinidia38747 Actinidia chinensis HOM05D003501 ORTHO05D004388 1.9e-164 582.8 380 77.4
Sc10g0003820 Simmondsia chinensis HOM05D003501 ORTHO05D004388 1.9e-164 582.8 380 74.5
Hund15639 Selenicereus undatus HOM05D003501 ORTHO05D004388 3.2e-164 582.0 377 75.6
Lsat_1_v5_gn_4_134160 Lactuca sativa HOM05D003501 ORTHO05D004388 1.2e-163 580.1 381 75.3
HanXRQChr11g0321781 Helianthus annuus HOM05D003501 ORTHO05D004388 3.6e-163 578.6 380 73.9
SGA_v2.0_scaffold135G34778 Striga asiatica HOM05D003501 ORTHO05D004388 3.6e-163 578.6 380 74.2
MSTRG.12186 Avicennia marina HOM05D003501 ORTHO05D004388 8.0e-163 577.4 380 74.7
TAR481G0007 Trochodendron aralioides HOM05D003501 ORTHO05D004388 1.5e-161 573.2 380 74.5
Migut.H00888 Erythranthe guttata HOM05D003501 ORTHO05D004388 2.2e-160 569.3 380 73.7
MD10G1234700 Malus domestica HOM05D003501 ORTHO05D004388 2.8e-160 568.9 380 73.7
Manes.04G047600 Manihot esculenta HOM05D003501 ORTHO05D004388 3.7e-160 568.5 380 74.7
CiPaw.14G095200 Carya illinoinensis HOM05D003501 ORTHO05D004388 8.3e-160 567.4 380 73.4
Eucgr.B03813 Eucalyptus grandis HOM05D003501 ORTHO05D004388 2.0e-158 562.8 381 74.8
Haze_23560 Corylus avellana HOM05D003501 ORTHO05D004388 7.7e-158 560.8 380 73.2
FvH4_3g12140 Fragaria vesca HOM05D003501 ORTHO05D004388 7.7e-158 560.8 380 73.7
FAN25G1502 Fragaria x ananassa HOM05D003501 ORTHO05D004388 7.7e-158 560.8 380 73.7
FAN16G1741 Fragaria x ananassa HOM05D003501 ORTHO05D004388 1.7e-157 559.7 380 73.7
CiPaw.08G137600 Carya illinoinensis HOM05D003501 ORTHO05D004388 2.2e-157 559.3 380 72.4
Prupe.4G110100 Prunus persica HOM05D003501 ORTHO05D004388 2.2e-157 559.3 380 72.4
Sopen02g018490 Solanum pennellii HOM05D003501 ORTHO05D004388 2.2e-157 559.3 380 72.9
Solyc02g069340.4 Solanum lycopersicum HOM05D003501 ORTHO05D004388 2.9e-157 558.9 380 72.9
Atru.chr3.3108 Acer truncatum HOM05D003501 ORTHO05D004388 3.8e-157 558.5 380 75.3
Cfa010173 Carpinus fangiana HOM05D003501 ORTHO05D004388 3.8e-157 558.5 380 72.4
Actinidia26218 Actinidia chinensis HOM05D003501 ORTHO05D004388 5.0e-157 558.1 393 73.3
FAN21G1855 Fragaria x ananassa HOM05D003501 ORTHO05D004388 5.0e-157 558.1 380 73.4
PGSC0003DMG400021209 Solanum tuberosum HOM05D003501 ORTHO05D004388 8.5e-157 557.4 380 72.4
Nn8g40776 Nelumbo nucifera HOM05D003501 ORTHO05D004388 1.1e-156 557.0 364 76.4
RcHm_v2.0_Chr5g0019871 Rosa chinensis HOM05D003501 ORTHO05D004388 1.5e-156 556.6 380 72.9
PGR102G2752 Punica granatum HOM05D003501 ORTHO05D004388 4.2e-156 555.1 380 72.6
GSVIVG01032606001 Vitis vinifera HOM05D003501 ORTHO05D004388 2.1e-155 552.7 380 72.6
Potri.009G016000 Populus trichocarpa HOM05D003501 ORTHO05D004388 2.7e-155 552.4 380 73.2
TWI79G0225 Tripterygium wilfordii HOM05D003501 ORTHO05D004388 2.7e-155 552.4 376 71.0
SalBow1G3035 Salvia bowleyana HOM05D003501 ORTHO05D004388 4.7e-155 551.6 380 72.9
Ah.11g044900 Amaranthus hybridus HOM05D003501 ORTHO05D004388 1.0e-154 550.4 380 72.9
Atru.chr9.1898 Acer truncatum HOM05D003501 ORTHO05D004388 1.4e-154 550.1 379 73.1
EL10As4g23426 Beta vulgaris HOM05D003501 ORTHO05D004388 8.8e-154 547.4 380 72.6
Cpa.g.sc56.89 Carica papaya HOM05D003501 ORTHO05D004388 3.4e-153 545.4 380 71.8
Potri.001G216400 Populus trichocarpa HOM05D003501 ORTHO05D004388 5.7e-153 544.7 380 71.6
Aa31LG2G15030 Aethionema arabicum HOM05D003501 ORTHO05D004388 2.2e-152 542.7 380 72.4
Ciclev10028663m.g Citrus clementina HOM05D003501 ORTHO05D004388 3.7e-152 542.0 378 73.5
MBI14_g02806_MAGBIO Magnolia biondii HOM05D003501 ORTHO05D004388 4.5e-150 535.0 381 69.3
MBI14_g41488_MAGBIO Magnolia biondii HOM05D003501 ORTHO05D004388 4.5e-150 535.0 381 69.3
Aqoxy3G03267 Aquilegia oxysepala HOM05D003501 ORTHO05D004388 5.0e-149 531.6 380 68.4
Peaxi162Scf00683g00345 Petunia axillaris HOM05D003501 ORTHO05D004388 6.6e-149 531.2 385 69.9
THA.LOC104809596 Tarenaya hassleriana HOM05D003501 ORTHO05D004388 8.6e-149 530.8 384 70.3
BcaC08g42972 Brassica carinata HOM05D003501 ORTHO05D004388 9.5e-148 527.3 380 69.2
A10p06220 Brassica napus HOM05D003501 ORTHO05D004388 9.5e-148 527.3 380 69.2
C06p02140 Brassica napus HOM05D003501 ORTHO05D004388 9.5e-148 527.3 380 69.2
BolC8t47419H Brassica oleracea HOM05D003501 ORTHO05D004388 1.2e-147 526.9 380 70.0
BraA08t32548Z Brassica rapa HOM05D003501 ORTHO05D004388 1.2e-147 526.9 380 70.0
Sed0017179 Sechium edule HOM05D003501 ORTHO05D004388 1.6e-147 526.6 380 68.9
BolC6t35344H Brassica oleracea HOM05D003501 ORTHO05D004388 2.1e-147 526.2 380 68.9
BraA10t42890Z Brassica rapa HOM05D003501 ORTHO05D004388 2.1e-147 526.2 380 68.9
Lalb_Chr09g0327341 Lupinus albus HOM05D003501 ORTHO05D004388 2.1e-147 526.2 381 68.0
BcaB07g33815 Brassica carinata HOM05D003501 ORTHO05D004388 2.8e-147 525.8 380 69.5
PSO063G0318 Papaver somniferum HOM05D003501 ORTHO05D004388 8.0e-147 524.2 377 69.8
BcaC07g37193 Brassica carinata HOM05D003501 ORTHO05D004388 1.8e-146 523.1 380 69.7
Glyma.13G179100 Glycine max HOM05D003501 ORTHO05D004388 2.3e-146 522.7 381 68.2
Sp6g23090 Schrenkiella parvula HOM05D003501 ORTHO05D004388 2.3e-146 522.7 380 68.4
AUR62029643 Chenopodium quinoa HOM05D003501 ORTHO05D004388 4.0e-146 521.9 367 71.7
Duzib168G1975 Durio zibethinus HOM05D003501 ORTHO05D004388 4.0e-146 521.9 380 69.2
Thhalv10013826m.g Eutrema salsugineum HOM05D003501 ORTHO05D004388 4.0e-146 521.9 381 70.1
BcaB04g17480 Brassica carinata HOM05D003501 ORTHO05D004388 5.2e-146 521.5 380 68.9
Lj2g0023176 Lotus japonicus HOM05D003501 ORTHO05D004388 5.2e-146 521.5 381 67.5
arahy.Tifrunner.gnm1.ann1.57UCU4 Arachis hypogaea HOM05D003501 ORTHO05D004388 8.9e-146 520.8 379 67.3
PSO170G5263 Papaver somniferum HOM05D003501 ORTHO05D004388 8.9e-146 520.8 377 69.5
Phvul.002G221600 Phaseolus vulgaris HOM05D003501 ORTHO05D004388 1.2e-145 520.4 381 66.9
Thecc.09G271900 Theobroma cacao HOM05D003501 ORTHO05D004388 1.2e-145 520.4 380 70.5
PSO170G6031 Papaver somniferum HOM05D003501 ORTHO05D004388 1.5e-145 520.0 378 69.8
Lj2g0019396 Lotus japonicus HOM05D003501 ORTHO05D004388 2.6e-145 519.2 381 67.5
arahy.Tifrunner.gnm1.ann1.FG3FW1 Arachis hypogaea HOM05D003501 ORTHO05D004388 4.4e-145 518.5 379 67.3
VMungo0251G0431 Vigna mungo HOM05D003501 ORTHO05D004388 4.4e-145 518.5 379 67.0
VMungo0720G0165 Vigna mungo HOM05D003501 ORTHO05D004388 9.8e-145 517.3 381 67.2
HPP92_001388 Vanilla planifolia HOM05D003501 ORTHO05D004388 2.2e-144 516.2 374 69.5
C08p05880 Brassica napus HOM05D003501 ORTHO05D004388 2.4e-143 512.7 411 64.5
A08p05420 Brassica napus HOM05D003501 ORTHO05D004388 9.2e-143 510.8 405 64.7
AL6G33080 Arabidopsis lyrata HOM05D003501 ORTHO05D004388 1.6e-142 510.0 380 67.9
Gohir.A09G099800 Gossypium hirsutum HOM05D003501 ORTHO05D004388 2.0e-142 509.6 380 68.2
Gohir.D09G099200 Gossypium hirsutum HOM05D003501 ORTHO05D004388 2.0e-142 509.6 380 68.4
Gorai.006G116200 Gossypium raimondii HOM05D003501 ORTHO05D004388 2.0e-142 509.6 380 68.4
Carub.0006s1974 Capsella rubella HOM05D003501 ORTHO05D004388 5.9e-142 508.1 380 68.7
Oeu018673.1 Olea europaea HOM05D003501 ORTHO05D004388 1.7e-141 506.5 402 63.7
MD05G1254500 Malus domestica HOM05D003501 ORTHO05D004388 2.3e-141 506.1 395 65.6
AT5G22100 Arabidopsis thaliana HOM05D003501 ORTHO05D004388 1.9e-140 503.1 374 68.2
Thhalv10028736m.g Eutrema salsugineum HOM05D003501 ORTHO05D004388 7.3e-140 501.1 380 67.6
SHI25258 Sapria himalayana HOM05D003501 ORTHO05D004388 1.6e-139 500.0 380 65.8
TPR.G12888 Trifolium pratense HOM05D003501 ORTHO05D004388 1.4e-138 496.9 383 65.3
Psat7g031640 Pisum sativum HOM05D003501 ORTHO05D004388 1.5e-137 493.4 383 66.1
AUR62025912 Chenopodium quinoa HOM05D003501 ORTHO05D004388 1.3e-136 490.3 367 68.4
Sabra16G0127400 Salix brachista HOM05D003501 ORTHO05D004388 1.3e-136 490.3 461 58.4
CDE01G0277 Ceratophyllum demersum HOM05D003501 ORTHO05D004388 1.7e-136 490.0 380 64.7
COL.COLO4_25421 Corchorus olitorius HOM05D003501 ORTHO05D004388 2.7e-134 482.6 358 67.0
MELO3C015060.2 Cucumis melo HOM05D003501 ORTHO05D004388 1.0e-133 480.7 377 64.5
CsaV3_1G043830 Cucumis sativus L. HOM05D003501 ORTHO05D004388 3.0e-133 479.2 377 64.7
Nitab4.5_0010866g0010 Nicotiana tabacum HOM05D003501 ORTHO05D004388 3.0e-133 479.2 380 63.9
Os03g0833700 Oryza sativa ssp. japonica HOM05D003501 ORTHO05D004388 6.6e-133 478.0 381 62.5
Mapoly0187s0002 Marchantia polymorpha HOM05D003501 ORTHO05D004388 1.5e-132 476.9 381 64.6
Zm00001eb316080 Zea mays HOM05D003501 ORTHO05D004388 1.9e-132 476.5 381 62.7
ClCG03G012190 Citrullus lanatus HOM05D003501 ORTHO05D004388 4.7e-131 471.9 374 63.6
Medtr8g098715 Medicago truncatula HOM05D003501 ORTHO05D004388 5.2e-130 468.4 409 60.1
unitig_21.g20948 Utricularia gibba HOM05D003501 ORTHO05D004388 1.2e-129 467.2 380 63.7
SMO144G0146 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 1.7e-128 463.4 372 63.2
Pp3c15_22440 Physcomitrium patens HOM05D003501 ORTHO05D004388 7.8e-126 454.5 376 62.0
Thhalv10029476m.g Eutrema salsugineum HOM05D003501 ORTHO05D004388 2.5e-124 449.5 376 62.8
Ca_12888_v3 Cicer arietinum L. HOM05D003501 ORTHO05D004388 2.3e-122 443.0 378 60.3
AagrBONN_evm.TU.Sc2ySwM_368.3338 Anthoceros agrestis HOM05D003501 ORTHO05D004388 1.2e-121 440.7 409 57.0
CBR_g11105 Chara braunii HOM05D003501 ORTHO05D004388 3.4e-121 439.1 375 59.2
CSS0035358 Camellia sinensis var. sinensis HOM05D003501 ORTHO05D004388 4.9e-120 435.3 312 71.8
QL05p062772 Quercus lobata HOM05D003501 ORTHO05D004388 7.3e-116 421.4 311 69.5
EL10Ac6g13118 Beta vulgaris HOM05D003501 ORTHO05D004388 1.2e-115 420.6 380 58.4
Cre09.g400367 Chlamydomonas reinhardtii HOM05D003501 ORTHO05D004388 4.6e-110 402.1 375 54.9
SalBow1G0615 Salvia bowleyana HOM05D003501 ORTHO05D004388 1.5e-105 387.1 379 55.7
Glyma.01G143200 Glycine max HOM05D003501 ORTHO05D004388 1.3e-104 384.0 302 63.2
Prupe.6G111200 Prunus persica HOM05D003501 ORTHO05D004388 1.7e-104 383.6 388 51.8
Nitab4.5_0005797g0050 Nicotiana tabacum HOM05D003501 ORTHO05D004388 1.3e-96 357.5 262 68.3
CAN.G953.11 Capsicum annuum HOM05D003501 ORTHO05D004388 1.3e-88 330.9 246 70.3
SalBow8G4485 Salvia bowleyana HOM05D003501 ORTHO05D004388 4.2e-87 325.9 377 49.9
ATR0097G041 Amborella trichopoda HOM05D003501 ORTHO05D004388 3.3e-84 316.2 235 65.1
PRCOL_00006339 Prasinoderma coloniale HOM05D003501 ORTHO05D004388 1.1e-82 311.2 374 45.7
MCO16G220 Micromonas commoda HOM05D003501 ORTHO05D004388 2.4e-82 310.1 457 40.0
SHI03441 Sapria himalayana HOM05D003501 ORTHO05D004388 5.1e-69 265.8 249 56.2
Haze_27241 Corylus avellana HOM05D003501 ORTHO05D004388 2.0e-68 263.8 378 41.3
PGSC0003DMG400006605 Solanum tuberosum HOM05D003501 ORTHO05D004388 1.3e-67 261.2 197 68.5
EL10As8g23847 Beta vulgaris HOM05D003501 ORTHO05D004388 9.4e-63 245.0 202 63.9
arahy.Tifrunner.gnm1.ann1.3N5Q80 Arachis hypogaea HOM05D003501 ORTHO05D004388 2.3e-61 240.4 262 52.3
CARHR191430 Cardamine hirsuta HOM05D003501 ORTHO05D004388 2.8e-59 233.4 162 73.5
CARHR072400 Cardamine hirsuta HOM05D003501 ORTHO05D004388 2.4e-58 230.3 184 63.6
Prupe.6G112100 Prunus persica HOM05D003501 ORTHO05D004388 3.5e-57 226.5 374 37.2
Actinidia15653 Actinidia chinensis HOM05D003501 ORTHO05D004388 3.8e-56 223.0 142 78.9
ECA232G4075 Erigeron canadensis HOM05D003501 ORTHO05D004388 5.0e-56 222.6 206 60.7
SMO361G0623 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 3.3e-52 209.9 214 56.1
Phvul.002G299004 Phaseolus vulgaris HOM05D003501 ORTHO05D004388 2.8e-51 206.8 169 62.1
SMO364G0671 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 2.2e-48 197.2 166 61.4
CAN.G953.12 Capsicum annuum HOM05D003501 ORTHO05D004388 3.2e-47 193.4 127 71.7
SMO004G0007 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 1.4e-45 188.0 165 59.4
Cfa022309 Carpinus fangiana HOM05D003501 ORTHO05D004388 7.7e-41 172.2 407 33.9
Lsat_1_v5_gn_2_70781 Lactuca sativa HOM05D003501 ORTHO05D004388 1.0e-40 171.8 119 71.4
HPP92_000027 Vanilla planifolia HOM05D003501 ORTHO05D004388 6.5e-40 169.1 127 70.9
SMO330G0055 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 6.1e-38 162.5 143 59.4
SMO065G0004 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 2.3e-37 160.6 143 58.0
SMO112G0083 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 1.3e-35 154.8 143 58.0
HPP92_000050 Vanilla planifolia HOM05D003501 ORTHO05D004388 5.4e-34 149.4 133 60.2
EL10Ac2g02713 Beta vulgaris HOM05D003501 ORTHO05D004388 3.3e-31 140.2 101 66.3
SMO201G0018 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 4.3e-31 139.8 237 41.4
SMO112G0081 Selaginella moellendorffii HOM05D016263 ORTHO05D003616 2.6e-28 130.6 263 36.9
SMO112G0124 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 7.5e-28 129.0 116 59.5
HPP92_028228 Vanilla planifolia HOM05D003501 ORTHO05D004388 6.4e-27 125.9 87 67.8
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 3.2e-26 123.6 85 69.4
HPP92_000028 Vanilla planifolia HOM05D003501 ORTHO05D004388 4.1e-26 123.2 87 65.5
Actinidia06069 Actinidia chinensis HOM05D003501 ORTHO05D004388 6.2e-22 109.4 272 34.2
SMO114G0139 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 6.2e-22 109.4 181 42.0
SMO163G0016 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 5.2e-21 106.3 111 54.1
HPP92_000031 Vanilla planifolia HOM05D003501 ORTHO05D004388 2.2e-19 100.9 92 57.6
SMO353G0041 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 4.9e-19 99.8 261 32.6
Actinidia15652 Actinidia chinensis HOM05D003501 ORTHO05D004388 8.3e-19 99.0 70 71.4
SMO265G0024 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 1.9e-18 97.8 96 55.2
SMO269G0020 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 2.4e-18 97.4 96 57.3
Lsat_1_v5_gn_6_85780 Lactuca sativa HOM05D003501 ORTHO05D004388 9.2e-18 95.5 71 64.8
Actinidia15651 Actinidia chinensis HOM05D003501 ORTHO05D004388 1.2e-17 95.1 71 63.4
EL10Ac4g08784 Beta vulgaris HOM05D003501 ORTHO05D004388 2.7e-17 94.0 143 40.6
Lsat_1_v5_gn_2_114700 Lactuca sativa HOM05D003501 ORTHO05D004388 2.7e-17 94.0 69 65.2
HPP92_028227 Vanilla planifolia HOM05D003501 ORTHO05D004388 4.6e-17 93.2 70 65.7
MD11G1147100 Malus domestica HOM05D003501 ORTHO05D004388 1.7e-16 91.3 58 72.4
HPP92_028030 Vanilla planifolia HOM05D003501 ORTHO05D004388 3.0e-16 90.5 70 64.3
SMO146G0031 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 5.6e-15 86.3 96 53.1
Mapoly0071s0005 Marchantia polymorpha HOM05D003501 ORTHO05D018303 9.5e-15 85.5 382 25.1
CDE12G0385 Ceratophyllum demersum HOM05D003501 ORTHO05D004388 1.6e-14 84.7 89 52.8
AL1G16300 Arabidopsis lyrata HOM05D003501 ORTHO05D004388 2.1e-14 84.3 95 47.4
Glyma.07G212600 Glycine max HOM05D003501 ORTHO05D004388 4.7e-14 83.2 57 70.2
QL93p1877_0036 Quercus lobata HOM05D003501 ORTHO05D004388 8.9e-13 79.0 76 52.6
AL2G16720 Arabidopsis lyrata HOM05D004310 ORTHO05D005403 3.4e-12 77.0 77 53.2
SMO194G0041 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 5.8e-12 76.3 87 49.4
SEGI_12129 Sequoiadendron giganteum HOM05D003501 ORTHO05D004388 7.5e-12 75.9 66 53.0
SMO340G0317 Selaginella moellendorffii HOM05D003501 ORTHO05D004388 4.9e-11 73.2 85 48.2
HPP92_027916 Vanilla planifolia HOM05D003501 ORTHO05D004388 3.2e-10 70.5 52 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3442 Anthoceros agrestis HOM05D003501 ORTHO05D018303 5.6e-07 59.7 195 26.7
Actinidia23574 Actinidia chinensis HOM05D003501 ORTHO05D057363 3.6e-06 57.0 151 30.5


User provided reference genes

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