Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024368 Daucus carota HOM05D005396 ORTHO05D006400 2.9e-216 755.0 388 100.0
Actinidia06861 Actinidia chinensis HOM05D005396 ORTHO05D006400 6.4e-107 391.7 319 61.4
TAR623G1186 Trochodendron aralioides HOM05D005396 ORTHO05D006400 1.1e-106 391.0 315 61.9
Rhsim13G0228100 Rhododendron simsii HOM05D005396 ORTHO05D006400 5.4e-106 388.7 325 60.9
RhsimUnG0154800 Rhododendron simsii HOM05D005396 ORTHO05D006400 1.6e-105 387.1 325 60.9
Peaxi162Scf00441g00618 Petunia axillaris HOM05D005396 ORTHO05D006400 8.7e-104 381.3 317 61.2
Hma1.2p1_0143F.1_g064480 Hydrangea macrophylla HOM05D005396 ORTHO05D006400 5.6e-103 378.6 317 60.9
Sc12g0000550 Simmondsia chinensis HOM05D005396 ORTHO05D006400 2.1e-102 376.7 317 59.0
Nn4g25074 Nelumbo nucifera HOM05D005396 ORTHO05D006400 8.1e-102 374.8 317 59.0
Hund20984 Selenicereus undatus HOM05D005396 ORTHO05D006400 1.1e-101 374.4 320 60.6
Sopen01g002210 Solanum pennellii HOM05D005396 ORTHO05D006400 1.1e-101 374.4 317 61.5
Nitab4.5_0001568g0090 Nicotiana tabacum HOM05D005396 ORTHO05D006400 1.4e-101 374.0 293 62.5
PGSC0003DMG400032195 Solanum tuberosum HOM05D005396 ORTHO05D006400 3.1e-101 372.9 317 60.6
CAN.G140.42 Capsicum annuum HOM05D005396 ORTHO05D006400 9.0e-101 371.3 317 59.6
HanXRQChr01g0021191 Helianthus annuus HOM05D005396 ORTHO05D006400 1.5e-100 370.5 264 66.7
Aqoxy5G02307 Aquilegia oxysepala HOM05D005396 ORTHO05D006400 2.6e-100 369.8 320 58.4
Solyc01g006210.4 Solanum lycopersicum HOM05D005396 ORTHO05D006400 2.6e-100 369.8 317 61.2
Oeu058539.1 Olea europaea HOM05D005396 ORTHO05D006400 3.4e-100 369.4 316 58.2
QL93p0267_0015 Quercus lobata HOM05D005396 ORTHO05D006400 3.4e-100 369.4 315 60.0
MSTRG.17554 Avicennia marina HOM05D005396 ORTHO05D006400 4.4e-100 369.0 317 57.4
SGA_v2.0_scaffold3G01566 Striga asiatica HOM05D005396 ORTHO05D006400 2.2e-99 366.7 323 58.8
GSVIVG01037451001 Vitis vinifera HOM05D005396 ORTHO05D006400 2.9e-99 366.3 320 61.6
DCAR_024367 Daucus carota HOM05D005396 ORTHO05D006400 3.8e-99 365.9 321 67.6
AUR62001615 Chenopodium quinoa HOM05D005396 ORTHO05D006400 8.4e-99 364.8 317 60.9
ECA248G0004 Erigeron canadensis HOM05D005396 ORTHO05D006400 1.1e-98 364.4 319 58.0
Cfa013848 Carpinus fangiana HOM05D005396 ORTHO05D006400 2.4e-98 363.2 313 59.1
PSO384G1109 Papaver somniferum HOM05D005396 ORTHO05D006400 1.2e-97 360.9 251 68.5
Lsat_1_v5_gn_1_68341 Lactuca sativa HOM05D005396 ORTHO05D006400 3.5e-97 359.4 264 66.3
vmacro04253 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 6.0e-97 358.6 381 51.7
MBI13_g02393_MAGBIO Magnolia biondii HOM05D005396 ORTHO05D006400 1.0e-96 357.8 249 68.3
Cpa.g.sc103.64 Carica papaya HOM05D005396 ORTHO05D006400 2.3e-96 356.7 324 58.3
Ah.15g099430 Amaranthus hybridus HOM05D005396 ORTHO05D006400 5.1e-96 355.5 310 58.4
Prupe.6G153500 Prunus persica HOM05D005396 ORTHO05D006400 8.7e-96 354.8 317 58.7
Migut.N02270 Erythranthe guttata HOM05D005396 ORTHO05D006400 1.1e-95 354.4 249 67.5
Manes.04G053800 Manihot esculenta HOM05D005396 ORTHO05D006400 1.5e-95 354.0 316 56.3
Dinv09746 Davidia involucrata HOM05D005396 ORTHO05D006400 1.9e-95 353.6 237 71.7
Atru.chr3.1131 Acer truncatum HOM05D005396 ORTHO05D006400 2.5e-95 353.2 272 64.0
Atru.chr3.1122 Acer truncatum HOM05D005396 ORTHO05D006400 5.6e-95 352.1 272 63.6
SalBow2G1218 Salvia bowleyana HOM05D005396 ORTHO05D006400 6.2e-94 348.6 321 56.4
Thecc.09G337500 Theobroma cacao HOM05D005396 ORTHO05D006400 8.1e-94 348.2 327 59.0
TWI79G1618 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 1.8e-93 347.1 272 64.0
Eucgr.J00626 Eucalyptus grandis HOM05D005396 ORTHO05D006400 4.0e-93 345.9 318 55.3
MD11G1180700 Malus domestica HOM05D005396 ORTHO05D006400 4.0e-93 345.9 267 64.0
RcHm_v2.0_Chr5g0056531 Rosa chinensis HOM05D005396 ORTHO05D006400 9.0e-93 344.7 317 55.8
PGR119G0906 Punica granatum HOM05D005396 ORTHO05D006400 1.5e-92 344.0 311 56.9
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 2.0e-92 343.6 316 58.9
EL10Ac7g16216 Beta vulgaris HOM05D005396 ORTHO05D006400 3.4e-92 342.8 359 52.4
ClCG02G024200 Citrullus lanatus HOM05D005396 ORTHO05D006400 7.6e-92 341.7 269 61.3
Cc01_g01860 Coffea canephora HOM05D005396 ORTHO05D006400 7.6e-92 341.7 321 53.6
A10p18950 Brassica napus HOM05D005396 ORTHO05D006400 9.9e-92 341.3 317 56.5
BraA10t43972Z Brassica rapa HOM05D005396 ORTHO05D006400 9.9e-92 341.3 317 56.5
TWI31G0083 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 1.7e-91 340.5 272 62.1
arahy.Tifrunner.gnm1.ann1.MJD0TM Arachis hypogaea HOM05D005396 ORTHO05D006400 3.8e-91 339.3 268 59.3
Carub.0006s1945 Capsella rubella HOM05D005396 ORTHO05D006400 3.8e-91 339.3 319 55.5
Potri.004G195600 Populus trichocarpa HOM05D005396 ORTHO05D006400 4.9e-91 339.0 317 55.5
HPP92_018982 Vanilla planifolia HOM05D005396 ORTHO05D006400 6.4e-91 338.6 272 59.9
Thhalv10013965m.g Eutrema salsugineum HOM05D005396 ORTHO05D006400 8.4e-91 338.2 268 63.1
FvH4_3g30540 Fragaria vesca HOM05D005396 ORTHO05D006400 1.1e-90 337.8 263 62.4
FAN11G0079 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.1e-90 337.8 263 62.4
FAN25G1745 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.1e-90 337.8 263 62.4
BcaC04g19522 Brassica carinata HOM05D005396 ORTHO05D006400 1.4e-90 337.4 268 63.4
ATR0307G059 Amborella trichopoda HOM05D005396 ORTHO05D006400 4.2e-90 335.9 262 61.1
C09p54930 Brassica napus HOM05D005396 ORTHO05D006400 4.2e-90 335.9 268 63.1
Zm00001eb405340 Zea mays HOM05D005396 ORTHO05D006400 5.4e-90 335.5 249 64.7
BcaB05g22770 Brassica carinata HOM05D005396 ORTHO05D006400 7.1e-90 335.1 249 65.1
BolC9t58356H Brassica oleracea HOM05D005396 ORTHO05D006400 7.1e-90 335.1 268 63.1
Ciclev10017900m.g Citrus clementina HOM05D005396 ORTHO05D006400 9.3e-90 334.7 317 56.2
Sed0007754 Sechium edule HOM05D005396 ORTHO05D006400 9.3e-90 334.7 257 61.5
MELO3C014703.2 Cucumis melo HOM05D005396 ORTHO05D006400 1.6e-89 334.0 257 61.9
BcaB08g36475 Brassica carinata HOM05D005396 ORTHO05D006400 2.1e-89 333.6 249 64.7
BcaC03g13834 Brassica carinata HOM05D005396 ORTHO05D006400 2.1e-89 333.6 250 66.0
Gohir.D03G133200 Gossypium hirsutum HOM05D005396 ORTHO05D006400 2.1e-89 333.6 272 61.4
Sp6g23380 Schrenkiella parvula HOM05D005396 ORTHO05D006400 2.7e-89 333.2 249 65.1
Gorai.003G140300 Gossypium raimondii HOM05D005396 ORTHO05D006400 3.5e-89 332.8 272 61.0
AT5G21140 Arabidopsis thaliana HOM05D005396 ORTHO05D006400 4.6e-89 332.4 323 58.2
BolC2t07100H Brassica oleracea HOM05D005396 ORTHO05D006400 7.9e-89 331.6 250 65.6
Gohir.A03G035066 Gossypium hirsutum HOM05D005396 ORTHO05D006400 7.9e-89 331.6 272 61.4
AL6G32750 Arabidopsis lyrata HOM05D005396 ORTHO05D006400 1.3e-88 330.9 317 56.2
BNapus_Darmor_BZH_scaffold_38p01120 Brassica napus HOM05D005396 ORTHO05D006400 1.3e-88 330.9 318 56.0
BraA02t05619Z Brassica rapa HOM05D005396 ORTHO05D006400 1.3e-88 330.9 318 56.0
Phvul.L001837 Phaseolus vulgaris HOM05D005396 ORTHO05D006400 1.3e-88 330.9 270 58.5
Os12g0127100 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 1.8e-88 330.5 250 64.0
CANSAT54G2052 Cannabis sativa HOM05D005396 ORTHO05D006400 2.3e-88 330.1 275 59.6
THA.LOC104799054 Tarenaya hassleriana HOM05D005396 ORTHO05D006400 2.3e-88 330.1 317 53.6
CARHR191730 Cardamine hirsuta HOM05D005396 ORTHO05D006400 3.9e-88 329.3 273 60.4
Lj2A553G20 Lonicera japonica HOM05D005396 ORTHO05D006400 5.1e-88 328.9 213 75.1
Os11g0130300 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 5.1e-88 328.9 250 63.6
PSO339G5547 Papaver somniferum HOM05D005396 ORTHO05D006400 5.1e-88 328.9 238 67.2
Ca_16226_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 8.7e-88 328.2 268 59.7
Ca_30133_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 8.7e-88 328.2 268 59.7
FAN16G3367 Fragaria x ananassa HOM05D005396 ORTHO05D006400 8.7e-88 328.2 263 60.8
VMungo0540G2152 Vigna mungo HOM05D005396 ORTHO05D006400 2.5e-87 326.6 270 57.8
Lj6g0008952 Lotus japonicus HOM05D005396 ORTHO05D006400 3.3e-87 326.2 261 60.9
Aa31LG1G13640 Aethionema arabicum HOM05D005396 ORTHO05D006400 4.3e-87 325.9 267 60.7
Dinv36333 Davidia involucrata HOM05D005396 ORTHO05D006400 1.3e-86 324.3 211 74.9
Nitab4.5_0005132g0020 Nicotiana tabacum HOM05D005396 ORTHO05D006400 2.1e-86 323.6 289 58.8
Lalb_Chr19g0127081 Lupinus albus HOM05D005396 ORTHO05D006400 2.8e-86 323.2 263 60.1
Glyma.20G050900 Glycine max HOM05D005396 ORTHO05D006400 4.8e-86 322.4 263 58.9
CsaV3_4G017330 Cucumis sativus L. HOM05D005396 ORTHO05D006400 1.4e-85 320.9 281 56.6
CDE02G2011 Ceratophyllum demersum HOM05D005396 ORTHO05D006400 1.8e-85 320.5 265 56.6
Sabra04G0132800 Salix brachista HOM05D005396 ORTHO05D006400 1.2e-84 317.8 374 47.9
Medtr3g078850 Medicago truncatula HOM05D005396 ORTHO05D006400 2.2e-83 313.5 268 57.8
TPR.G28402 Trifolium pratense HOM05D005396 ORTHO05D006400 2.2e-83 313.5 326 51.2
Haze_22522 Corylus avellana HOM05D005396 ORTHO05D006400 4.6e-81 305.8 313 53.0
EL10Ac7g16212 Beta vulgaris HOM05D005396 ORTHO05D006400 8.7e-80 301.6 323 51.7
EL10Ac1g01677 Beta vulgaris HOM05D005396 ORTHO05D006400 9.6e-79 298.1 318 51.6
arahy.Tifrunner.gnm1.ann1.MU94NL Arachis hypogaea HOM05D005396 ORTHO05D006400 2.4e-77 293.5 238 58.0
Duzib170G1145 Durio zibethinus HOM05D005396 ORTHO05D006400 7.6e-76 288.5 325 48.3
FAN21G3982 Fragaria x ananassa HOM05D005396 ORTHO05D006400 8.2e-70 268.5 211 63.5
Psat0s646g0040 Pisum sativum HOM05D005396 ORTHO05D006400 4.1e-69 266.2 240 57.9
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 2.5e-66 256.9 211 57.8
Pp3c20_10070 Physcomitrium patens HOM05D005396 ORTHO05D006400 7.9e-65 251.9 269 47.2
AUR62020162 Chenopodium quinoa HOM05D005396 ORTHO05D006400 8.8e-64 248.4 258 51.2
CiPaw.07G159800 Carya illinoinensis HOM05D005396 ORTHO05D006400 1.4e-56 224.6 211 53.6
BcaC03g13835 Brassica carinata HOM05D005396 ORTHO05D006400 8.8e-56 221.9 247 51.0
BolC2t07101H Brassica oleracea HOM05D005396 ORTHO05D006400 1.5e-55 221.1 242 51.7
SHI25366 Sapria himalayana HOM05D005396 ORTHO05D000023 2.2e-54 217.2 348 37.6
BraA02t05620Z Brassica rapa HOM05D005396 ORTHO05D006400 1.8e-53 214.2 240 50.8
unitig_60.g25792 Utricularia gibba HOM05D005396 ORTHO05D006400 9.1e-53 211.8 319 41.1
EL10Ac7g16203 Beta vulgaris HOM05D005396 ORTHO05D006400 4.5e-52 209.5 204 55.4
BNapus_Darmor_BZH_scaffold_38p01110 Brassica napus HOM05D005396 ORTHO05D006400 7.7e-52 208.8 239 50.2
SMO239G0090 Selaginella moellendorffii HOM05D005396 ORTHO05D006400 4.2e-50 203.0 233 45.1
CSS0010626 Camellia sinensis var. sinensis HOM05D005396 ORTHO05D006400 4.8e-46 189.5 190 52.6
CBR_g4478 Chara braunii HOM05D005396 ORTHO05D000048 1.8e-45 187.6 225 40.0
EL10Ac7g16214 Beta vulgaris HOM05D005396 ORTHO05D006400 9.1e-45 185.3 256 44.1
EL10Ac7g16209 Beta vulgaris HOM05D005396 ORTHO05D006400 7.2e-42 175.6 227 47.1
vmacro22428 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 4.7e-41 172.9 171 52.6
EL10Ac7g16205 Beta vulgaris HOM05D005396 ORTHO05D006400 8.0e-41 172.2 389 33.7
AagrBONN_evm.TU.Sc2ySwM_368.35 Anthoceros agrestis HOM05D005396 ORTHO05D006400 6.8e-40 169.1 200 42.0
RcHm_v2.0_Chr6g0256561 Rosa chinensis HOM05D005396 ORTHO05D006400 6.5e-35 152.5 113 60.2
RcHm_v2.0_Chr5g0056151 Rosa chinensis HOM05D005396 ORTHO05D006400 9.4e-34 148.7 108 60.2
Zm00001eb199750 Zea mays HOM05D005396 ORTHO05D006400 6.1e-33 146.0 205 45.4
CSS0025534 Camellia sinensis var. sinensis HOM05D005396 ORTHO05D006400 1.0e-32 145.2 107 69.2
Psat5g030400 Pisum sativum HOM05D001137 ORTHO05D006400 1.3e-30 138.3 198 39.9
DCAR_024365 Daucus carota HOM05D000336 ORTHO05D006400 2.9e-27 127.1 98 73.5
DCAR_024366 Daucus carota HOM05D000336 ORTHO05D000593 8.6e-27 125.6 96 72.9
DCAR_015214 Daucus carota HOM05D000336 ORTHO05D006400 1.5e-26 124.8 65 95.4
Mapoly0185s0017 Marchantia polymorpha HOM05D005396 ORTHO05D006400 1.2e-25 121.7 270 29.6
MCO07G491 Micromonas commoda HOM05D005396 ORTHO05D006400 2.9e-19 100.5 196 31.1
PRCOL_00005415 Prasinoderma coloniale HOM05D005396 ORTHO05D006400 1.5e-15 88.2 205 31.2
Actinidia16276 Actinidia chinensis HOM05D005396 ORTHO05D006400 6.4e-14 82.8 105 43.8
DCAR_025858 Daucus carota HOM05D000336 ORTHO05D000593 2.4e-13 80.9 63 63.5
DCAR_028843 Daucus carota HOM05D000336 ORTHO05D000593 2.4e-13 80.9 63 65.1
Cfa026181 Carpinus fangiana HOM05D002398 ORTHO05D000038 2.3e-11 74.3 234 23.9
HanXRQChr08g0223711 Helianthus annuus HOM05D005396 ORTHO05D006400 2.3e-11 74.3 43 74.4
DCAR_015399 Daucus carota HOM05D000336 ORTHO05D000593 3.3e-10 70.5 62 61.3
SEGI_06155 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 1.8e-08 64.7 41 56.1
Cre03.g181650 Chlamydomonas reinhardtii HOM05D005396 ORTHO05D006400 2.9e-06 57.4 152 26.3
AUR62027079 Chenopodium quinoa HOM05D000336 ORTHO05D000593 3.7e-06 57.0 55 52.7
Hund06480 Selenicereus undatus HOM05D000336 ORTHO05D000593 3.7e-06 57.0 55 52.7
AUR62030918 Chenopodium quinoa HOM05D000336 ORTHO05D000593 6.4e-06 56.2 55 52.7
THA.LOC104812202 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 6.4e-06 56.2 61 44.3
EL10Ac9g22128 Beta vulgaris HOM05D000336 ORTHO05D000593 8.3e-06 55.8 55 50.9
DCAR_021896 Daucus carota HOM05D000336 ORTHO05D000593 8.3e-06 55.8 55 52.7
vmacro01901 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 8.3e-06 55.8 55 50.9
vmacro23359 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 8.3e-06 55.8 55 50.9


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