Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024367 Daucus carota HOM05D005396 ORTHO05D006400 1.5e-127 459.5 238 100.0
DCAR_024368 Daucus carota HOM05D005396 ORTHO05D006400 2.7e-100 369.0 321 67.6
Peaxi162Scf00441g00618 Petunia axillaris HOM05D005396 ORTHO05D006400 8.3e-49 198.0 316 40.2
Nitab4.5_0001568g0090 Nicotiana tabacum HOM05D005396 ORTHO05D006400 2.1e-47 193.4 263 43.0
Sopen01g002210 Solanum pennellii HOM05D005396 ORTHO05D006400 2.7e-47 193.0 316 40.5
PGSC0003DMG400032195 Solanum tuberosum HOM05D005396 ORTHO05D006400 2.7e-47 193.0 316 40.2
CAN.G140.42 Capsicum annuum HOM05D005396 ORTHO05D006400 4.6e-47 192.2 316 39.6
Solyc01g006210.4 Solanum lycopersicum HOM05D005396 ORTHO05D006400 6.0e-47 191.8 314 40.8
Lj2A553G20 Lonicera japonica HOM05D005396 ORTHO05D006400 1.0e-46 191.0 166 61.4
AUR62001615 Chenopodium quinoa HOM05D005396 ORTHO05D006400 1.7e-46 190.3 316 41.5
MSTRG.17554 Avicennia marina HOM05D005396 ORTHO05D006400 2.3e-46 189.9 317 39.4
Nn4g25074 Nelumbo nucifera HOM05D005396 ORTHO05D006400 2.3e-46 189.9 317 41.0
Rhsim13G0228100 Rhododendron simsii HOM05D005396 ORTHO05D006400 3.0e-46 189.5 325 39.4
RhsimUnG0154800 Rhododendron simsii HOM05D005396 ORTHO05D006400 1.5e-45 187.2 325 39.4
Oeu058539.1 Olea europaea HOM05D005396 ORTHO05D006400 3.3e-45 186.0 313 39.0
Dinv36333 Davidia involucrata HOM05D005396 ORTHO05D006400 5.6e-45 185.3 166 59.6
Sc12g0000550 Simmondsia chinensis HOM05D005396 ORTHO05D006400 5.6e-45 185.3 318 38.1
Actinidia06861 Actinidia chinensis HOM05D005396 ORTHO05D006400 9.5e-45 184.5 318 38.1
Hund20984 Selenicereus undatus HOM05D005396 ORTHO05D006400 1.2e-44 184.1 312 40.1
TAR623G1186 Trochodendron aralioides HOM05D005396 ORTHO05D006400 1.6e-44 183.7 315 39.0
Dinv09746 Davidia involucrata HOM05D005396 ORTHO05D006400 2.1e-44 183.3 166 59.0
SGA_v2.0_scaffold3G01566 Striga asiatica HOM05D005396 ORTHO05D006400 2.1e-44 183.3 323 38.7
Duzib170G1145 Durio zibethinus HOM05D005396 ORTHO05D006400 2.8e-44 183.0 295 41.7
HanXRQChr01g0021191 Helianthus annuus HOM05D005396 ORTHO05D006400 3.6e-44 182.6 254 43.7
ECA248G0004 Erigeron canadensis HOM05D005396 ORTHO05D006400 2.3e-43 179.9 303 40.3
Cpa.g.sc103.64 Carica papaya HOM05D005396 ORTHO05D006400 3.1e-43 179.5 324 39.5
QL93p0267_0015 Quercus lobata HOM05D005396 ORTHO05D006400 3.1e-43 179.5 317 37.9
Haze_22522 Corylus avellana HOM05D005396 ORTHO05D006400 4.0e-43 179.1 288 38.5
Hma1.2p1_0143F.1_g064480 Hydrangea macrophylla HOM05D005396 ORTHO05D006400 5.2e-43 178.7 317 38.2
Lsat_1_v5_gn_1_68341 Lactuca sativa HOM05D005396 ORTHO05D006400 5.2e-43 178.7 255 44.3
GSVIVG01037451001 Vitis vinifera HOM05D005396 ORTHO05D006400 3.4e-42 176.0 321 39.6
Cfa013848 Carpinus fangiana HOM05D005396 ORTHO05D006400 5.8e-42 175.3 314 36.9
Atru.chr3.1131 Acer truncatum HOM05D005396 ORTHO05D006400 7.5e-42 174.9 272 40.8
Manes.04G053800 Manihot esculenta HOM05D005396 ORTHO05D006400 9.9e-42 174.5 316 37.3
Ah.15g099430 Amaranthus hybridus HOM05D005396 ORTHO05D006400 1.3e-41 174.1 309 38.5
Atru.chr3.1122 Acer truncatum HOM05D005396 ORTHO05D006400 1.7e-41 173.7 272 40.4
PSO384G1109 Papaver somniferum HOM05D005396 ORTHO05D006400 2.9e-41 172.9 166 55.4
Migut.N02270 Erythranthe guttata HOM05D005396 ORTHO05D006400 8.3e-41 171.4 247 41.7
Thecc.09G337500 Theobroma cacao HOM05D005396 ORTHO05D006400 1.9e-40 170.2 322 39.4
SalBow2G1218 Salvia bowleyana HOM05D005396 ORTHO05D006400 4.1e-40 169.1 321 39.3
ClCG02G024200 Citrullus lanatus HOM05D005396 ORTHO05D006400 5.4e-40 168.7 161 57.8
MBI13_g02393_MAGBIO Magnolia biondii HOM05D005396 ORTHO05D006400 7.1e-40 168.3 162 55.6
EL10Ac7g16216 Beta vulgaris HOM05D005396 ORTHO05D006400 1.6e-39 167.2 356 34.6
Aqoxy5G02307 Aquilegia oxysepala HOM05D005396 ORTHO05D006400 2.1e-39 166.8 320 36.2
PSO339G5547 Papaver somniferum HOM05D005396 ORTHO05D006400 2.1e-39 166.8 164 53.7
BNapus_Darmor_BZH_scaffold_38p01120 Brassica napus HOM05D005396 ORTHO05D006400 6.0e-39 165.2 162 54.9
BraA02t05619Z Brassica rapa HOM05D005396 ORTHO05D006400 6.0e-39 165.2 162 54.9
Carub.0006s1945 Capsella rubella HOM05D005396 ORTHO05D006400 6.0e-39 165.2 162 54.9
TWI79G1618 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 1.0e-38 164.5 272 39.7
BcaC03g13834 Brassica carinata HOM05D005396 ORTHO05D006400 1.3e-38 164.1 162 54.9
vmacro04253 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 1.3e-38 164.1 377 34.5
AT5G21140 Arabidopsis thaliana HOM05D005396 ORTHO05D006400 1.7e-38 163.7 162 54.3
HPP92_018982 Vanilla planifolia HOM05D005396 ORTHO05D006400 1.7e-38 163.7 270 40.4
Thhalv10013965m.g Eutrema salsugineum HOM05D005396 ORTHO05D006400 3.9e-38 162.5 162 54.3
unitig_60.g25792 Utricularia gibba HOM05D005396 ORTHO05D006400 3.9e-38 162.5 244 42.6
BolC2t07100H Brassica oleracea HOM05D005396 ORTHO05D006400 5.1e-38 162.2 162 54.3
CDE02G2011 Ceratophyllum demersum HOM05D005396 ORTHO05D006400 5.1e-38 162.2 164 54.3
Prupe.6G153500 Prunus persica HOM05D005396 ORTHO05D006400 5.1e-38 162.2 317 36.3
BcaB05g22770 Brassica carinata HOM05D005396 ORTHO05D006400 6.6e-38 161.8 162 54.3
RcHm_v2.0_Chr5g0056531 Rosa chinensis HOM05D005396 ORTHO05D006400 6.6e-38 161.8 314 35.4
Sp6g23380 Schrenkiella parvula HOM05D005396 ORTHO05D006400 6.6e-38 161.8 162 56.2
Ciclev10017900m.g Citrus clementina HOM05D005396 ORTHO05D006400 8.6e-38 161.4 313 37.1
MELO3C014703.2 Cucumis melo HOM05D005396 ORTHO05D006400 8.6e-38 161.4 165 53.9
MD11G1180700 Malus domestica HOM05D005396 ORTHO05D006400 1.1e-37 161.0 267 39.3
Zm00001eb405340 Zea mays HOM05D005396 ORTHO05D006400 1.5e-37 160.6 164 53.0
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 1.9e-37 160.2 166 53.6
Sed0007754 Sechium edule HOM05D005396 ORTHO05D006400 1.9e-37 160.2 161 52.2
PGR119G0906 Punica granatum HOM05D005396 ORTHO05D006400 2.5e-37 159.8 311 37.9
THA.LOC104799054 Tarenaya hassleriana HOM05D005396 ORTHO05D006400 2.5e-37 159.8 309 38.2
AL6G32750 Arabidopsis lyrata HOM05D005396 ORTHO05D006400 3.3e-37 159.5 162 53.1
BcaC04g19522 Brassica carinata HOM05D005396 ORTHO05D006400 3.3e-37 159.5 163 53.4
A10p18950 Brassica napus HOM05D005396 ORTHO05D006400 3.3e-37 159.5 163 53.4
C09p54930 Brassica napus HOM05D005396 ORTHO05D006400 3.3e-37 159.5 163 53.4
BraA10t43972Z Brassica rapa HOM05D005396 ORTHO05D006400 3.3e-37 159.5 163 53.4
BcaB08g36475 Brassica carinata HOM05D005396 ORTHO05D006400 4.3e-37 159.1 166 52.4
Os12g0127100 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 4.3e-37 159.1 165 52.7
CARHR191730 Cardamine hirsuta HOM05D005396 ORTHO05D006400 7.3e-37 158.3 162 55.6
Cc01_g01860 Coffea canephora HOM05D005396 ORTHO05D006400 7.3e-37 158.3 321 34.9
FvH4_3g30540 Fragaria vesca HOM05D005396 ORTHO05D006400 1.2e-36 157.5 262 38.2
FAN11G0079 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.2e-36 157.5 262 38.2
FAN25G1745 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.2e-36 157.5 262 38.2
BolC9t58356H Brassica oleracea HOM05D005396 ORTHO05D006400 1.6e-36 157.1 163 52.8
Eucgr.J00626 Eucalyptus grandis HOM05D005396 ORTHO05D006400 1.6e-36 157.1 315 35.9
Os11g0130300 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 1.6e-36 157.1 165 52.1
Potri.004G195600 Populus trichocarpa HOM05D005396 ORTHO05D006400 2.8e-36 156.4 317 36.3
Aa31LG1G13640 Aethionema arabicum HOM05D005396 ORTHO05D006400 3.6e-36 156.0 162 51.2
Phvul.L001837 Phaseolus vulgaris HOM05D005396 ORTHO05D006400 3.6e-36 156.0 270 36.7
Gohir.A03G035066 Gossypium hirsutum HOM05D005396 ORTHO05D006400 1.1e-35 154.5 166 52.4
VMungo0540G2152 Vigna mungo HOM05D005396 ORTHO05D006400 1.4e-35 154.1 327 32.1
arahy.Tifrunner.gnm1.ann1.MJD0TM Arachis hypogaea HOM05D005396 ORTHO05D006400 1.8e-35 153.7 268 35.8
Gohir.D03G133200 Gossypium hirsutum HOM05D005396 ORTHO05D006400 2.4e-35 153.3 166 52.4
TWI31G0083 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 4.0e-35 152.5 273 37.7
Gorai.003G140300 Gossypium raimondii HOM05D005396 ORTHO05D006400 5.2e-35 152.1 166 51.8
ATR0307G059 Amborella trichopoda HOM05D005396 ORTHO05D006400 6.8e-35 151.8 162 50.0
CANSAT54G2052 Cannabis sativa HOM05D005396 ORTHO05D006400 4.4e-34 149.1 273 37.0
FAN16G3367 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.3e-33 147.5 316 33.5
CsaV3_4G017330 Cucumis sativus L. HOM05D005396 ORTHO05D006400 2.2e-33 146.7 190 45.8
FAN21G3982 Fragaria x ananassa HOM05D005396 ORTHO05D006400 2.9e-33 146.4 164 49.4
Lalb_Chr19g0127081 Lupinus albus HOM05D005396 ORTHO05D006400 4.9e-33 145.6 263 36.9
Nitab4.5_0005132g0020 Nicotiana tabacum HOM05D005396 ORTHO05D006400 6.4e-33 145.2 220 40.5
TPR.G28402 Trifolium pratense HOM05D005396 ORTHO05D006400 6.4e-33 145.2 326 33.1
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 1.4e-32 144.1 162 46.9
Ca_16226_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 1.9e-32 143.7 268 36.2
Ca_30133_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 1.9e-32 143.7 268 36.2
EL10Ac1g01677 Beta vulgaris HOM05D005396 ORTHO05D006400 2.4e-32 143.3 291 34.7
Lj6g0008952 Lotus japonicus HOM05D005396 ORTHO05D006400 2.4e-32 143.3 261 37.2
Glyma.20G050900 Glycine max HOM05D005396 ORTHO05D006400 4.2e-32 142.5 165 48.5
arahy.Tifrunner.gnm1.ann1.MU94NL Arachis hypogaea HOM05D005396 ORTHO05D006400 4.6e-31 139.0 163 45.4
Sabra04G0132800 Salix brachista HOM05D005396 ORTHO05D006400 6.0e-31 138.7 374 31.3
Medtr3g078850 Medicago truncatula HOM05D005396 ORTHO05D006400 5.1e-30 135.6 292 33.2
EL10Ac7g16212 Beta vulgaris HOM05D005396 ORTHO05D006400 1.6e-28 130.6 322 32.9
AUR62020162 Chenopodium quinoa HOM05D005396 ORTHO05D006400 8.1e-28 128.3 232 36.6
Psat0s646g0040 Pisum sativum HOM05D005396 ORTHO05D006400 1.6e-23 114.0 169 42.0
EL10Ac7g16203 Beta vulgaris HOM05D005396 ORTHO05D006400 1.1e-21 107.8 159 43.4
SHI25366 Sapria himalayana HOM05D005396 ORTHO05D000023 5.6e-21 105.5 98 54.1
BcaC03g13835 Brassica carinata HOM05D005396 ORTHO05D006400 6.2e-20 102.1 165 42.4
BolC2t07101H Brassica oleracea HOM05D005396 ORTHO05D006400 1.4e-19 100.9 265 35.1
BNapus_Darmor_BZH_scaffold_38p01110 Brassica napus HOM05D005396 ORTHO05D006400 3.1e-19 99.8 251 34.3
CSS0025534 Camellia sinensis var. sinensis HOM05D005396 ORTHO05D006400 5.3e-19 99.0 63 74.6
Pp3c20_10070 Physcomitrium patens HOM05D005396 ORTHO05D006400 9.0e-19 98.2 143 38.5
BraA02t05620Z Brassica rapa HOM05D005396 ORTHO05D006400 1.2e-18 97.8 166 41.0
EL10Ac7g16214 Beta vulgaris HOM05D005396 ORTHO05D006400 5.8e-18 95.5 210 33.3
SMO239G0090 Selaginella moellendorffii HOM05D005396 ORTHO05D006400 2.2e-17 93.6 163 35.0
Mapoly0185s0017 Marchantia polymorpha HOM05D005396 ORTHO05D006400 6.4e-17 92.0 220 29.5
EL10Ac7g16205 Beta vulgaris HOM05D005396 ORTHO05D006400 3.0e-14 83.2 188 33.5
EL10Ac7g16209 Beta vulgaris HOM05D005396 ORTHO05D006400 2.8e-12 76.6 80 53.8
CBR_g4478 Chara braunii HOM05D005396 ORTHO05D000048 5.8e-10 68.9 118 36.4
MCO07G491 Micromonas commoda HOM05D005396 ORTHO05D006400 2.1e-07 60.5 104 27.9
Zm00001eb199750 Zea mays HOM05D005396 ORTHO05D006400 2.7e-07 60.1 141 33.3
PRCOL_00005415 Prasinoderma coloniale HOM05D005396 ORTHO05D006400 1.0e-06 58.2 129 31.0
CiPaw.07G159800 Carya illinoinensis HOM05D005396 ORTHO05D006400 2.3e-06 57.0 186 26.9


User provided reference genes

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