Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 2.2e-302 1041.6 562 100.0
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 4.0e-158 562.4 669 50.4
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 3.1e-155 552.7 498 60.8
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 2.7e-154 549.7 588 54.8
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 2.7e-154 549.7 442 67.0
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 9.5e-152 541.2 499 59.1
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 5.7e-149 531.9 597 55.1
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 1.3e-148 530.8 581 53.4
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 8.3e-148 528.1 515 55.5
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 1.6e-146 523.9 589 54.0
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 2.7e-146 523.1 578 51.7
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 4.6e-146 522.3 497 56.3
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 6.2e-143 511.9 505 55.8
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 2.3e-142 510.0 577 53.4
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 4.0e-142 509.2 504 59.9
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 5.2e-142 508.8 601 51.9
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 3.4e-141 506.1 492 58.5
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 7.5e-141 505.0 582 51.5
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 6.4e-140 501.9 492 57.9
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 8.3e-140 501.5 428 65.0
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 7.0e-139 498.4 503 54.9
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.2e-138 497.7 302 77.2
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 2.0e-138 496.9 498 56.8
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.0e-137 494.6 577 53.2
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 6.6e-137 491.9 589 52.3
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-136 490.7 586 50.2
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.5e-136 490.7 503 56.5
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 1.9e-136 490.3 513 56.7
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 2.5e-136 490.0 613 50.2
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 5.6e-136 488.8 638 48.0
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 2.1e-135 486.9 301 76.1
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 3.6e-135 486.1 355 71.8
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 1.8e-134 483.8 595 50.9
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 4.0e-134 482.6 643 46.8
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 5.2e-134 482.3 301 76.7
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 8.9e-134 481.5 593 51.4
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 8.9e-134 481.5 305 74.8
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 1.5e-133 480.7 605 50.2
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.5e-133 480.7 597 50.1
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.3e-132 477.6 356 71.9
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 4.9e-132 475.7 354 66.7
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 6.4e-132 475.3 301 76.1
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 8.3e-132 474.9 356 67.4
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 3.2e-131 473.0 346 67.1
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 4.1e-131 472.6 585 51.1
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 4.1e-131 472.6 606 47.4
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 1.6e-130 470.7 352 71.3
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 7.8e-130 468.4 356 71.6
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 3.0e-129 466.5 354 71.2
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 6.6e-129 465.3 506 53.0
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 4.3e-128 462.6 493 53.8
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 5.6e-128 462.2 563 51.7
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 5.6e-128 462.2 585 51.1
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 9.5e-128 461.5 331 71.3
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 9.5e-128 461.5 353 69.1
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 9.5e-128 461.5 573 51.8
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 1.6e-127 460.7 352 71.3
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 3.6e-127 459.5 563 51.3
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 4.0e-126 456.1 512 54.1
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.0e-125 453.8 553 49.4
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 7.6e-125 451.8 582 49.5
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 1.3e-124 451.1 625 48.6
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 2.9e-124 449.9 599 48.2
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 5.4e-123 445.7 670 44.8
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 6.6e-121 438.7 351 63.2
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 6.6e-121 438.7 272 74.6
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 8.6e-121 438.3 357 62.7
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.1e-120 438.0 301 70.8
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.5e-120 436.8 413 55.2
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 1.2e-119 434.5 585 49.4
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 2.1e-119 433.7 301 69.8
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 3.6e-119 433.0 354 65.5
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 3.6e-119 433.0 301 70.1
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 4.7e-119 432.6 568 48.4
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 8.1e-119 431.8 302 69.2
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 1.8e-118 430.6 301 69.4
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 2.4e-118 430.3 301 68.8
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 6.8e-118 428.7 301 69.4
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 1.2e-117 427.9 358 64.2
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.5e-117 427.6 301 68.8
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 4.4e-117 426.0 351 65.0
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 4.4e-117 426.0 351 65.0
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 1.7e-116 424.1 557 48.8
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 1.7e-116 424.1 347 63.7
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 6.4e-116 422.2 351 64.4
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 2.4e-115 420.2 608 44.9
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 6.0e-114 415.6 352 62.2
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 1.4e-107 394.4 634 43.8
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 3.2e-107 393.3 299 63.2
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 3.2e-107 393.3 344 61.3
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 3.5e-106 389.8 347 57.6
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 6.0e-106 389.0 347 56.5
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 1.0e-105 388.3 346 61.3
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 1.7e-105 387.5 547 44.2
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 6.6e-105 385.6 299 60.9
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 5.3e-102 375.9 345 56.2
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 5.3e-102 375.9 345 56.2
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 6.9e-102 375.6 299 60.5
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 5.8e-101 372.5 345 59.4
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 2.4e-99 367.1 305 60.0
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 4.2e-99 366.3 345 58.6
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.0e-97 361.7 303 59.4
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 5.3e-94 349.4 312 61.2
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 4.9e-92 342.8 349 54.2
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 2.7e-90 337.0 409 46.2
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 7.4e-88 328.9 301 57.5
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 2.1e-87 327.4 300 59.3
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 3.7e-87 326.6 493 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 6.9e-78 295.8 326 48.8
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 2.7e-74 283.9 326 45.1
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 9.7e-72 275.4 458 42.8
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.3e-71 275.0 548 39.1
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.4e-70 270.8 245 61.6
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 9.1e-70 268.9 342 41.2
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 7.2e-67 259.2 179 69.3
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 7.9e-66 255.8 236 60.6
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 5.7e-64 249.6 144 81.9
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 7.0e-54 216.1 259 46.3
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 2.3e-49 201.1 123 80.5
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 2.6e-40 171.0 254 39.4
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 5.2e-33 146.7 292 34.6
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.3e-31 142.1 185 43.2
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 3.7e-31 140.6 95 73.7
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 1.4e-25 122.1 73 78.1
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 1.8e-25 121.7 111 60.4
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 3.4e-24 117.5 250 36.0
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.9e-15 87.8 65 63.1
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 2.4e-14 84.7 61 54.1
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 7.1e-14 83.2 62 56.5
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 8.1e-10 69.7 45 77.8
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 1.5e-08 65.5 53 60.4
CARHR113280 Cardamine hirsuta HOM05D000125 ORTHO05D009513 1.9e-06 58.5 37 70.3


User provided reference genes

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