Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010386 Daucus carota HOM05D030126 ORTHO05D029202 1.2e-202 709.5 344 100.0
DCAR_010381 Daucus carota HOM05D030126 ORTHO05D029202 1.1e-195 686.4 344 96.5
DCAR_028488 Daucus carota HOM05D030126 ORTHO05D029202 7.1e-142 507.7 251 98.4
DCAR_005037 Daucus carota HOM05D030126 ORTHO05D029202 9.8e-75 284.6 159 89.3
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.3e-21 108.2 59 81.4
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 1.5e-19 101.3 59 74.6
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 1.9e-17 94.4 52 76.9
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 4.2e-17 93.2 70 61.4
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 5.5e-17 92.8 55 72.7
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 5.5e-17 92.8 59 67.8
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 9.3e-17 92.0 67 62.7
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 9.3e-17 92.0 59 69.5
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 1.2e-16 91.7 74 60.8
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 1.6e-16 91.3 52 73.1
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 2.7e-16 90.5 70 61.4
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 2.7e-16 90.5 67 62.7
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 2.7e-16 90.5 52 73.1
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 3.5e-16 90.1 52 75.0
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 3.5e-16 90.1 55 70.9
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 3.5e-16 90.1 59 64.4
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 4.6e-16 89.7 52 73.1
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 7.9e-16 89.0 52 71.2
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.0e-15 88.6 52 75.0
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.0e-15 88.6 52 75.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.0e-15 88.6 52 69.2
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 1.0e-15 88.6 52 69.2
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 1.0e-15 88.6 52 75.0
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 1.3e-15 88.2 52 75.0
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 1.3e-15 88.2 52 67.3
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 1.3e-15 88.2 67 59.7
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 1.3e-15 88.2 67 59.7
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 1.3e-15 88.2 52 71.2
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 1.8e-15 87.8 67 58.2
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 2.3e-15 87.4 52 73.1
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 2.3e-15 87.4 67 58.2
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 3.0e-15 87.0 70 60.0
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 3.0e-15 87.0 59 61.0
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 3.0e-15 87.0 52 69.2
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 3.0e-15 87.0 52 69.2
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 3.0e-15 87.0 52 69.2
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 3.9e-15 86.7 52 71.2
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 3.9e-15 86.7 64 57.8
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 3.9e-15 86.7 88 48.9
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 5.1e-15 86.3 55 67.3
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 69.2
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 69.2
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 5.1e-15 86.3 67 59.7
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 71.2
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 71.2
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 6.7e-15 85.9 52 69.2
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 8.7e-15 85.5 52 67.3
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 8.7e-15 85.5 52 67.3
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 8.7e-15 85.5 52 65.4
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 8.7e-15 85.5 67 59.7
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 8.7e-15 85.5 67 59.7
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 8.7e-15 85.5 60 66.7
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 8.7e-15 85.5 70 61.4
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 1.1e-14 85.1 52 67.3
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 1.1e-14 85.1 65 60.0
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 1.1e-14 85.1 67 59.7
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 1.1e-14 85.1 52 69.2
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 1.5e-14 84.7 55 63.6
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 1.5e-14 84.7 52 71.2
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 1.5e-14 84.7 52 71.2
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 1.5e-14 84.7 52 73.1
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 2.5e-14 84.0 52 73.1
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 2.5e-14 84.0 85 48.2
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.5e-14 84.0 135 39.3
Atru.chr3.3789 Acer truncatum HOM05D001937 ORTHO05D003828 3.3e-14 83.6 51 70.6
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 3.3e-14 83.6 67 59.7
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 3.3e-14 83.6 65 58.5
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 4.3e-14 83.2 52 67.3
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 4.3e-14 83.2 104 45.2
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 4.3e-14 83.2 52 67.3
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 4.3e-14 83.2 52 71.2
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 4.3e-14 83.2 52 71.2
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 4.3e-14 83.2 52 69.2
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 4.3e-14 83.2 67 61.2
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 5.6e-14 82.8 52 65.4
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 5.6e-14 82.8 59 64.4
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 5.6e-14 82.8 52 65.4
TAR374G0100 Trochodendron aralioides HOM05D001937 ORTHO05D003828 5.6e-14 82.8 70 55.7
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 5.6e-14 82.8 70 55.7
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 7.4e-14 82.4 69 52.2
A06p02530 Brassica napus HOM05D001937 ORTHO05D003828 7.4e-14 82.4 85 47.1
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 7.4e-14 82.4 59 61.0
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 7.4e-14 82.4 59 61.0
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 7.4e-14 82.4 67 56.7
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 7.4e-14 82.4 52 65.4
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 1.3e-13 81.6 52 63.5
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 1.3e-13 81.6 52 63.5
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 1.3e-13 81.6 52 63.5
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 1.6e-13 81.3 52 65.4
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 1.6e-13 81.3 52 67.3
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 2.8e-13 80.5 67 55.2
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 3.7e-13 80.1 57 66.7
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.7e-13 80.1 57 66.7
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 3.7e-13 80.1 52 65.4
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 3.7e-13 80.1 55 58.2
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 3.7e-13 80.1 52 65.4
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 4.8e-13 79.7 52 63.5
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 4.8e-13 79.7 52 71.2
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 4.8e-13 79.7 52 69.2
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 6.2e-13 79.3 52 71.2
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 1.1e-12 78.6 56 62.5
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.1e-12 78.6 56 62.5
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 1.1e-12 78.6 56 62.5
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 1.1e-12 78.6 56 62.5
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 1.1e-12 78.6 56 62.5
RcHm_v2.0_Chr5g0013491 Rosa chinensis HOM05D001937 ORTHO05D003828 1.1e-12 78.6 57 63.2
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 1.1e-12 78.6 52 61.5
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.1e-12 78.6 67 58.2
TAR628G0280 Trochodendron aralioides HOM05D001937 ORTHO05D003828 1.4e-12 78.2 83 50.6
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 1.8e-12 77.8 64 54.7
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 1.8e-12 77.8 58 58.6
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 1.8e-12 77.8 52 67.3
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.8e-12 77.8 52 67.3
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.8e-12 77.8 52 67.3
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.8e-12 77.8 52 67.3
BcaC08g43307 Brassica carinata HOM05D001937 ORTHO05D003828 4.0e-12 76.6 56 60.7
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 6.9e-12 75.9 52 65.4
BraA06t23460Z Brassica rapa HOM05D001937 ORTHO05D003828 3.4e-11 73.6 56 58.9
CARHR094460 Cardamine hirsuta HOM05D001937 ORTHO05D003828 3.8e-10 70.1 51 60.8
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 4.9e-10 69.7 52 59.6
Aa31LG7G15320 Aethionema arabicum HOM05D001937 ORTHO05D003828 1.9e-09 67.8 47 59.6
SEGI_35630 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 1.9e-09 67.8 78 46.2
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 3.2e-09 67.0 76 47.4
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 3.2e-09 67.0 52 57.7
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 3.5e-08 63.5 64 45.3
CAN.G1138.12 Capsicum annuum HOM05D001201 ORTHO05D001100 4.3e-06 56.6 28 82.1
C06p06540 Brassica napus HOM05D001937 ORTHO05D003828 9.6e-06 55.5 74 39.2
BolC6t35766H Brassica oleracea HOM05D001937 ORTHO05D003828 9.6e-06 55.5 74 39.2
DCAR_017626 Daucus carota HOM05D001201 ORTHO05D001100 9.6e-06 55.5 28 82.1
Lj2A129T52 Lonicera japonica HOM05D001201 ORTHO05D001100 9.6e-06 55.5 46 60.9
PSO063G2265 Papaver somniferum HOM05D001201 ORTHO05D001100 9.6e-06 55.5 28 82.1
PSO339G3200 Papaver somniferum HOM05D001201 ORTHO05D001100 9.6e-06 55.5 28 82.1


User provided reference genes

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