Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010381 Daucus carota HOM05D030126 ORTHO05D029202 1.6e-202 709.1 344 100.0
DCAR_010386 Daucus carota HOM05D030126 ORTHO05D029202 1.5e-195 686.0 344 96.5
DCAR_028488 Daucus carota HOM05D030126 ORTHO05D029202 1.7e-140 503.1 251 97.6
DCAR_005037 Daucus carota HOM05D030126 ORTHO05D029202 2.4e-73 280.0 159 87.4
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 4.8e-21 106.3 59 79.7
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 5.8e-19 99.4 59 72.9
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 2.4e-17 94.0 260 31.9
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 1.6e-16 91.3 70 60.0
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 2.1e-16 90.9 55 70.9
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 2.1e-16 90.9 59 66.1
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 3.5e-16 90.1 67 61.2
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 3.5e-16 90.1 59 67.8
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 4.6e-16 89.7 74 59.5
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 7.9e-16 89.0 52 71.2
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 1.0e-15 88.6 70 60.0
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 1.0e-15 88.6 67 61.2
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 1.3e-15 88.2 52 71.2
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 1.3e-15 88.2 55 69.1
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 1.3e-15 88.2 59 62.7
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 1.8e-15 87.8 52 73.1
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 2.3e-15 87.4 52 71.2
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 3.9e-15 86.7 52 69.2
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 73.1
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 73.1
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 5.1e-15 86.3 52 67.3
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 5.1e-15 86.3 52 67.3
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 5.1e-15 86.3 67 58.2
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 5.1e-15 86.3 52 73.1
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 5.1e-15 86.3 67 58.2
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 6.7e-15 85.9 52 73.1
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 6.7e-15 85.9 52 65.4
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 6.7e-15 85.9 67 56.7
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 6.7e-15 85.9 52 69.2
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 8.7e-15 85.5 67 56.7
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 1.1e-14 85.1 59 59.3
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 1.1e-14 85.1 52 71.2
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 1.5e-14 84.7 70 58.6
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 1.5e-14 84.7 64 56.2
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.5e-14 84.7 52 67.3
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.5e-14 84.7 52 67.3
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 1.5e-14 84.7 52 67.3
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 1.9e-14 84.3 55 65.5
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.9e-14 84.3 52 69.2
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 1.9e-14 84.3 67 58.2
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 1.9e-14 84.3 70 55.7
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 2.5e-14 84.0 52 67.3
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 2.5e-14 84.0 52 67.3
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 2.5e-14 84.0 70 55.7
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 2.5e-14 84.0 70 55.7
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 2.5e-14 84.0 52 69.2
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 2.5e-14 84.0 52 69.2
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 3.3e-14 83.6 67 58.2
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 3.3e-14 83.6 67 58.2
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 3.3e-14 83.6 52 67.3
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 3.3e-14 83.6 70 60.0
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 4.3e-14 83.2 52 63.5
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 4.3e-14 83.2 60 65.0
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 4.3e-14 83.2 65 58.5
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 4.3e-14 83.2 67 58.2
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 5.6e-14 82.8 55 61.8
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 5.6e-14 82.8 52 65.4
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 5.6e-14 82.8 52 67.3
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 7.4e-14 82.4 52 69.2
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 7.4e-14 82.4 52 69.2
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 7.4e-14 82.4 52 71.2
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 9.6e-14 82.0 85 47.1
Atru.chr3.3789 Acer truncatum HOM05D001937 ORTHO05D003828 1.3e-13 81.6 51 68.6
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 1.3e-13 81.6 52 71.2
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 1.3e-13 81.6 67 58.2
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 1.3e-13 81.6 65 56.9
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.6e-13 81.3 67 59.7
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 2.1e-13 80.9 52 65.4
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 2.1e-13 80.9 52 65.4
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.1e-13 80.9 354 28.0
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 2.1e-13 80.9 59 62.7
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 2.1e-13 80.9 52 69.2
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 2.1e-13 80.9 52 69.2
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 2.1e-13 80.9 52 67.3
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 2.8e-13 80.5 67 58.2
A06p02530 Brassica napus HOM05D001937 ORTHO05D003828 2.8e-13 80.5 85 45.9
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 2.8e-13 80.5 59 59.3
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 2.8e-13 80.5 59 59.3
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 2.8e-13 80.5 52 63.5
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 2.8e-13 80.5 67 55.2
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 2.8e-13 80.5 52 63.5
TAR374G0100 Trochodendron aralioides HOM05D001937 ORTHO05D003828 2.8e-13 80.5 70 54.3
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 2.8e-13 80.5 70 54.3
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 3.7e-13 80.1 69 50.7
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 3.7e-13 80.1 52 63.5
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 6.2e-13 79.3 52 61.5
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 6.2e-13 79.3 52 61.5
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 6.2e-13 79.3 52 61.5
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 8.1e-13 79.0 52 63.5
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 8.1e-13 79.0 52 65.4
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 1.1e-12 78.6 67 53.7
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 1.4e-12 78.2 57 64.9
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.4e-12 78.2 57 64.9
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 1.4e-12 78.2 55 56.4
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 1.8e-12 77.8 52 63.5
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 1.8e-12 77.8 52 63.5
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 2.4e-12 77.4 52 61.5
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 2.4e-12 77.4 52 69.2
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 2.4e-12 77.4 52 67.3
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 3.1e-12 77.0 52 69.2
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 4.0e-12 76.6 56 60.7
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 4.0e-12 76.6 56 60.7
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 4.0e-12 76.6 56 60.7
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 4.0e-12 76.6 56 60.7
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 4.0e-12 76.6 56 60.7
RcHm_v2.0_Chr5g0013491 Rosa chinensis HOM05D001937 ORTHO05D003828 4.0e-12 76.6 57 61.4
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 4.0e-12 76.6 67 56.7
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 5.3e-12 76.3 52 59.6
TAR628G0280 Trochodendron aralioides HOM05D001937 ORTHO05D003828 5.3e-12 76.3 83 49.4
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 6.9e-12 75.9 64 53.1
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 9.0e-12 75.5 58 56.9
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 9.0e-12 75.5 52 65.4
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 9.0e-12 75.5 52 65.4
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 9.0e-12 75.5 52 65.4
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 9.0e-12 75.5 52 65.4
BcaC08g43307 Brassica carinata HOM05D001937 ORTHO05D003828 1.5e-11 74.7 56 58.9
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.4e-11 73.6 52 63.5
BraA06t23460Z Brassica rapa HOM05D001937 ORTHO05D003828 1.3e-10 71.6 56 57.1
CARHR094460 Cardamine hirsuta HOM05D001937 ORTHO05D003828 1.4e-09 68.2 51 58.8
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 2.5e-09 67.4 52 57.7
SEGI_35630 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 5.5e-09 66.2 78 44.9
Aa31LG7G15320 Aethionema arabicum HOM05D001937 ORTHO05D003828 7.1e-09 65.9 47 57.4
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 1.2e-08 65.1 76 46.1
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 1.6e-08 64.7 52 55.8
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 1.3e-07 61.6 64 43.8
CAN.G1138.12 Capsicum annuum HOM05D001201 ORTHO05D001100 4.3e-06 56.6 28 82.1
DCAR_017626 Daucus carota HOM05D001201 ORTHO05D001100 9.6e-06 55.5 28 82.1
Lj2A129T52 Lonicera japonica HOM05D001201 ORTHO05D001100 9.6e-06 55.5 46 60.9
PSO063G2265 Papaver somniferum HOM05D001201 ORTHO05D001100 9.6e-06 55.5 28 82.1
PSO339G3200 Papaver somniferum HOM05D001201 ORTHO05D001100 9.6e-06 55.5 28 82.1


User provided reference genes

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