Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009277 Daucus carota HOM05D000179 ORTHO05D000107 6.8e-162 573.9 291 100.0
Peaxi162Scf00182g00066 Petunia axillaris HOM05D000179 ORTHO05D000107 1.6e-38 164.1 311 43.4
CSS0027710 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 5.2e-37 159.1 308 42.9
Nitab4.5_0008025g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 6.8e-37 158.7 302 39.4
Potri.006G129300 Populus trichocarpa HOM05D000179 ORTHO05D000107 4.4e-36 156.0 304 41.1
Nitab4.5_0000669g0050 Nicotiana tabacum HOM05D000179 ORTHO05D000107 7.6e-36 155.2 310 38.4
CSS0005289 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 2.9e-35 153.3 308 42.5
MSTRG.19151 Avicennia marina HOM05D000179 ORTHO05D000107 4.9e-35 152.5 336 41.4
Sabra06G0101800 Salix brachista HOM05D000179 ORTHO05D000107 4.2e-34 149.4 308 42.5
Cc06_g03810 Coffea canephora HOM05D000179 ORTHO05D000107 4.6e-33 146.0 337 38.0
HanXRQChr14g0454701 Helianthus annuus HOM05D000179 ORTHO05D000107 6.0e-33 145.6 268 40.7
Rhsim05G0183000 Rhododendron simsii HOM05D000179 ORTHO05D000107 6.0e-33 145.6 320 38.8
Actinidia19689 Actinidia chinensis HOM05D000179 ORTHO05D000107 2.3e-32 143.7 272 44.9
Migut.J00556 Erythranthe guttata HOM05D000179 ORTHO05D000107 2.3e-32 143.7 349 36.4
Duzib128G0139 Durio zibethinus HOM05D000179 ORTHO05D000107 3.9e-32 142.9 309 39.2
Lsat_1_v5_gn_2_109221 Lactuca sativa HOM05D000179 ORTHO05D000107 1.5e-31 141.0 286 42.0
Actinidia40035 Actinidia chinensis HOM05D000179 ORTHO05D000107 4.3e-31 139.4 306 39.9
HanXRQChr07g0195611 Helianthus annuus HOM05D000179 ORTHO05D000107 1.3e-30 137.9 279 39.8
QL07p044738 Quercus lobata HOM05D000179 ORTHO05D000107 2.1e-30 137.1 334 38.6
Manes.09G069600 Manihot esculenta HOM05D000179 ORTHO05D000107 3.6e-30 136.3 317 35.6
Oeu014966.1 Olea europaea HOM05D000179 ORTHO05D000107 8.1e-30 135.2 309 37.9
MSTRG.5734 Avicennia marina HOM05D000179 ORTHO05D000107 1.8e-29 134.0 307 39.7
Oeu059979.1 Olea europaea HOM05D000179 ORTHO05D000107 3.1e-29 133.3 260 41.5
GSVIVG01025658001 Vitis vinifera HOM05D000179 ORTHO05D000107 3.1e-29 133.3 300 39.3
CiPaw.10G134700 Carya illinoinensis HOM05D000179 ORTHO05D000107 4.0e-29 132.9 343 36.7
Manes.08G005700 Manihot esculenta HOM05D000179 ORTHO05D000107 4.0e-29 132.9 297 40.4
Nn2g10748 Nelumbo nucifera HOM05D000179 ORTHO05D000107 4.0e-29 132.9 333 37.5
CiPaw.09G177700 Carya illinoinensis HOM05D000179 ORTHO05D000107 9.0e-29 131.7 346 37.0
Lj2C110T9 Lonicera japonica HOM05D000179 ORTHO05D000107 1.5e-28 131.0 318 36.8
Gohir.D04G113900 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.6e-28 130.2 279 40.9
Gorai.009G418600 Gossypium raimondii HOM05D000179 ORTHO05D000107 3.4e-28 129.8 280 40.0
Cfa017533 Carpinus fangiana HOM05D000179 ORTHO05D000107 5.8e-28 129.0 330 36.1
Glyma.03G179700 Glycine max HOM05D000179 ORTHO05D000107 7.6e-28 128.6 285 37.9
Haze_20615 Corylus avellana HOM05D000179 ORTHO05D000107 9.9e-28 128.3 329 35.0
Thecc.05G057400 Theobroma cacao HOM05D000179 ORTHO05D000107 9.9e-28 128.3 298 37.2
Phvul.001G176200 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 8.4e-27 125.2 279 38.0
Potri.016G088500 Populus trichocarpa HOM05D000179 ORTHO05D000107 8.4e-27 125.2 311 36.7
COL.COLO4_27043 Corchorus olitorius HOM05D000179 ORTHO05D000107 1.4e-26 124.4 294 40.8
Duzib093G0684 Durio zibethinus HOM05D000179 ORTHO05D000107 1.4e-26 124.4 309 36.9
Solyc09g007550.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 1.4e-26 124.4 243 37.9
PGSC0003DMG400001747 Solanum tuberosum HOM05D000179 ORTHO05D000107 1.4e-26 124.4 275 36.7
Sabra16G0094000 Salix brachista HOM05D000179 ORTHO05D000107 5.4e-26 122.5 306 36.6
VMungo1383G0655 Vigna mungo HOM05D000179 ORTHO05D000107 5.4e-26 122.5 277 35.7
Dinv37274 Davidia involucrata HOM05D000179 ORTHO05D000107 7.1e-26 122.1 299 36.8
Gohir.A04G074900 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.1e-26 122.1 278 39.6
Sopen09g002420 Solanum pennellii HOM05D000179 ORTHO05D000107 7.1e-26 122.1 286 35.0
Oeu005339.1 Olea europaea HOM05D000179 ORTHO05D000107 1.6e-25 120.9 309 35.9
SGA_v2.0_scaffold126G33921 Striga asiatica HOM05D000179 ORTHO05D000107 1.6e-25 120.9 281 38.1
Solyc10g084180.2 Solanum lycopersicum HOM05D000179 ORTHO05D000107 2.1e-25 120.6 299 34.8
Gohir.D09G146400 Gossypium hirsutum HOM05D000179 ORTHO05D000107 6.0e-25 119.0 305 36.7
Oeu001347.1 Olea europaea HOM05D000179 ORTHO05D000107 6.0e-25 119.0 311 38.3
Phvul.007G221400 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 7.8e-25 118.6 339 34.2
Oeu001261.1 Olea europaea HOM05D000179 ORTHO05D000107 1.7e-24 117.5 300 37.7
Duzib106G1425 Durio zibethinus HOM05D000179 ORTHO05D000107 2.3e-24 117.1 298 36.9
ECA238G3341 Erigeron canadensis HOM05D000179 ORTHO05D000107 2.3e-24 117.1 291 36.4
Gohir.A09G106700 Gossypium hirsutum HOM05D000179 ORTHO05D000107 3.0e-24 116.7 290 37.9
Aqoxy4G03249 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 3.9e-24 116.3 336 34.8
TAR636G1842 Trochodendron aralioides HOM05D000179 ORTHO05D000107 5.1e-24 115.9 341 37.2
Gohir.A09G150700 Gossypium hirsutum HOM05D000179 ORTHO05D000107 6.6e-24 115.5 305 35.7
Nitab4.5_0001297g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 6.6e-24 115.5 319 37.6
Thecc.09G257800 Theobroma cacao HOM05D000179 ORTHO05D000107 6.6e-24 115.5 299 38.8
Gorai.006G167600 Gossypium raimondii HOM05D000179 ORTHO05D000107 8.7e-24 115.2 305 36.1
Atru.chr8.1882 Acer truncatum HOM05D000179 ORTHO05D000107 1.1e-23 114.8 303 36.3
Gorai.006G120000 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.1e-23 114.8 290 37.9
Gohir.D09G103400 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.5e-23 114.4 290 37.9
PGSC0003DMG400010478 Solanum tuberosum HOM05D000179 ORTHO05D000107 1.9e-23 114.0 306 33.0
Manes.11G142900 Manihot esculenta HOM05D000179 ORTHO05D000107 3.3e-23 113.2 327 35.8
Sopen10g033630 Solanum pennellii HOM05D000179 ORTHO05D000107 4.3e-23 112.8 311 33.4
TAR369G0993 Trochodendron aralioides HOM05D000179 ORTHO05D000107 9.6e-23 111.7 338 34.6
vmacro20043 Vaccinium macrocarpon HOM05D000179 ORTHO05D000107 1.3e-22 111.3 198 40.9
QL01p022905 Quercus lobata HOM05D000179 ORTHO05D000107 2.8e-22 110.2 329 34.7
Glyma.13G139000 Glycine max HOM05D000179 ORTHO05D000107 4.8e-22 109.4 337 33.5
Peaxi162Scf00472g00007 Petunia axillaris HOM05D000179 ORTHO05D000107 4.8e-22 109.4 308 36.4
Manes.04G023700 Manihot esculenta HOM05D000179 ORTHO05D000107 6.2e-22 109.0 325 34.2
Glyma.19G180400 Glycine max HOM05D000179 ORTHO05D000107 1.1e-21 108.2 207 42.5
PGR004G1524 Punica granatum HOM05D000179 ORTHO05D000107 1.1e-21 108.2 330 33.9
Actinidia07126 Actinidia chinensis HOM05D000179 ORTHO05D000107 1.8e-21 107.5 297 36.4
CAN.G1778.4 Capsicum annuum HOM05D000179 ORTHO05D000107 1.8e-21 107.5 309 35.6
Lalb_Chr02g0156221 Lupinus albus HOM05D000179 ORTHO05D000107 1.8e-21 107.5 306 34.6
Nitab4.5_0001192g0030 Nicotiana tabacum HOM05D000179 ORTHO05D000107 1.8e-21 107.5 310 35.8
Cc01_g11310 Coffea canephora HOM05D000179 ORTHO05D000107 4.0e-21 106.3 336 36.0
Cc06_g21850 Coffea canephora HOM05D000179 ORTHO05D000107 4.0e-21 106.3 336 36.0
MSTRG.21134 Avicennia marina HOM05D000179 ORTHO05D000107 9.0e-21 105.1 325 32.9
Cfa011349 Carpinus fangiana HOM05D000179 ORTHO05D000107 9.0e-21 105.1 277 33.6
Duzib150G0217 Durio zibethinus HOM05D000179 ORTHO05D000107 9.0e-21 105.1 311 34.4
Sc02g0001870 Simmondsia chinensis HOM05D000179 ORTHO05D000107 9.0e-21 105.1 153 46.4
CiPaw.13G109300 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.5e-20 104.4 316 32.6
Glyma.10G051500 Glycine max HOM05D000179 ORTHO05D000107 2.0e-20 104.0 339 33.0
Actinidia24090 Actinidia chinensis HOM05D000179 ORTHO05D000107 2.6e-20 103.6 246 38.6
PGR004G2709 Punica granatum HOM05D000179 ORTHO05D000107 2.6e-20 103.6 340 35.0
GSVIVG01025166001 Vitis vinifera HOM05D000179 ORTHO05D000107 5.8e-20 102.4 258 38.4
MSTRG.18652 Avicennia marina HOM05D000179 ORTHO05D000107 9.9e-20 101.7 316 35.1
Haze_23885 Corylus avellana HOM05D000179 ORTHO05D000107 2.2e-19 100.5 270 33.3
EL10Ac7g16535 Beta vulgaris HOM05D000179 ORTHO05D000107 2.9e-19 100.1 194 38.7
SalBow3G2498 Salvia bowleyana HOM05D000179 ORTHO05D000107 2.9e-19 100.1 212 41.0
TAR623G1421 Trochodendron aralioides HOM05D000179 ORTHO05D000107 3.8e-19 99.8 332 34.3
Cpa.g.sc45.59 Carica papaya HOM05D000179 ORTHO05D000107 4.9e-19 99.4 321 34.9
Duzib168G1581 Durio zibethinus HOM05D000179 ORTHO05D000107 4.9e-19 99.4 322 34.5
VMungo0720G0413 Vigna mungo HOM05D000179 ORTHO05D000107 1.1e-18 98.2 299 31.8
TWI53G0612 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 1.4e-18 97.8 264 37.5
Psat0s323g0040 Pisum sativum HOM05D000179 ORTHO05D000107 3.2e-18 96.7 316 33.9
Eucgr.A01159 Eucalyptus grandis HOM05D000179 ORTHO05D000107 5.4e-18 95.9 317 34.4
Lj5g0010328 Lotus japonicus HOM05D000179 ORTHO05D000107 5.4e-18 95.9 301 34.6
Gorai.001G131000 Gossypium raimondii HOM05D000179 ORTHO05D000107 7.1e-18 95.5 312 33.7
MD04G1100300 Malus domestica HOM05D000179 ORTHO05D000107 7.1e-18 95.5 299 30.8
CAN.G1091.4 Capsicum annuum HOM05D000179 ORTHO05D000107 9.3e-18 95.1 274 34.3
Gohir.A07G117200 Gossypium hirsutum HOM05D000179 ORTHO05D000107 9.3e-18 95.1 313 33.2
TAR633G0506 Trochodendron aralioides HOM05D000179 ORTHO05D000107 9.3e-18 95.1 270 37.8
Gohir.D07G121500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.6e-17 94.4 315 34.3
FAN09G2472 Fragaria x ananassa HOM05D000179 ORTHO05D000107 3.5e-17 93.2 258 36.0
FAN05G5821 Fragaria x ananassa HOM05D000179 ORTHO05D000107 1.3e-16 91.3 258 36.8
FAN02G1019 Fragaria x ananassa HOM05D000179 ORTHO05D000107 1.8e-16 90.9 255 37.3
RcHm_v2.0_Chr3g0469381 Rosa chinensis HOM05D000179 ORTHO05D000107 1.8e-16 90.9 247 35.6
COL.COLO4_06848 Corchorus olitorius HOM05D000179 ORTHO05D000107 2.3e-16 90.5 313 33.5
Solyc06g075250.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 3.0e-16 90.1 349 30.9
CSS0045915 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 3.9e-16 89.7 299 34.1
AUR62040055 Chenopodium quinoa HOM05D000179 ORTHO05D000107 5.1e-16 89.4 297 35.0
FvH4_6g15680 Fragaria vesca HOM05D000179 ORTHO05D000107 6.7e-16 89.0 258 36.0
TWI74G1120 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 8.7e-16 88.6 298 33.2
FAN14G4299 Fragaria x ananassa HOM05D000179 ORTHO05D000107 1.9e-15 87.4 258 35.7
Lj2A1030T63 Lonicera japonica HOM05D000179 ORTHO05D000107 4.3e-15 86.3 268 33.6
arahy.Tifrunner.gnm1.ann1.DX8F1P Arachis hypogaea HOM05D000179 ORTHO05D000107 7.4e-15 85.5 267 34.1
arahy.Tifrunner.gnm1.ann1.MH5UWC Arachis hypogaea HOM05D000179 ORTHO05D000107 9.6e-15 85.1 267 34.1
Ciclev10028294m.g Citrus clementina HOM05D000179 ORTHO05D000107 1.4e-13 81.3 264 33.3
CAN.G1001.24 Capsicum annuum HOM05D000179 ORTHO05D000107 2.4e-13 80.5 170 40.0
Cpa.g.sc216.25 Carica papaya HOM05D000179 ORTHO05D000107 2.4e-13 80.5 298 33.9
Hma1.2p1_1030F.1_g249855 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 2.4e-13 80.5 301 32.9
Ca_11462_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 3.1e-13 80.1 303 33.0
PGSC0003DMG400003372 Solanum tuberosum HOM05D000179 ORTHO05D000107 4.0e-13 79.7 157 42.7
Dinv12588 Davidia involucrata HOM05D000179 ORTHO05D000107 6.9e-13 79.0 335 29.6
Sopen06g031640 Solanum pennellii HOM05D000179 ORTHO05D000107 1.2e-12 78.2 343 28.9
MD12G1120300 Malus domestica HOM05D000179 ORTHO05D000107 1.5e-12 77.8 277 31.8
TPR.G18262 Trifolium pratense HOM05D000179 ORTHO05D000107 2.0e-12 77.4 148 41.2
FAN21G0099 Fragaria x ananassa HOM05D000179 ORTHO05D000107 4.5e-12 76.3 204 40.7
FAN25G3646 Fragaria x ananassa HOM05D000179 ORTHO05D000107 4.5e-12 76.3 204 40.7
AUR62042556 Chenopodium quinoa HOM05D000179 ORTHO05D000107 7.6e-12 75.5 239 30.5
ATR0681G091 Amborella trichopoda HOM05D000179 ORTHO05D000107 1.7e-11 74.3 345 31.3
Nitab4.5_0000196g0040 Nicotiana tabacum HOM05D000179 ORTHO05D000107 2.2e-11 73.9 168 41.1
FvH4_3g32700 Fragaria vesca HOM05D000179 ORTHO05D000107 3.8e-11 73.2 204 40.2
FAN16G0493 Fragaria x ananassa HOM05D000179 ORTHO05D000107 3.8e-11 73.2 204 40.2
Peaxi162Scf00101g00099 Petunia axillaris HOM05D000179 ORTHO05D000107 3.8e-11 73.2 274 32.5
RcHm_v2.0_Chr5g0059771 Rosa chinensis HOM05D000179 ORTHO05D000107 4.9e-11 72.8 196 38.3
Peaxi162Scf00270g01116 Petunia axillaris HOM05D000179 ORTHO05D000107 6.5e-11 72.4 138 41.3
Ciclev10011592m.g Citrus clementina HOM05D000179 ORTHO05D000107 8.4e-11 72.0 247 34.0
FAN11G1839 Fragaria x ananassa HOM05D000179 ORTHO05D000107 1.1e-10 71.6 247 35.6
unitig_26.g9220 Utricularia gibba HOM05D000179 ORTHO05D000107 1.1e-10 71.6 282 30.1
Psat3g044080 Pisum sativum HOM05D000179 ORTHO05D000107 1.4e-10 71.2 293 31.1
Aa31LG1G21930 Aethionema arabicum HOM05D000179 ORTHO05D000107 4.2e-10 69.7 160 40.6
Prupe.6G238500 Prunus persica HOM05D000179 ORTHO05D000107 5.5e-10 69.3 336 29.8
TWI79G1702 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 7.1e-10 68.9 300 33.0
Hma1.2p1_0111F.1_g054130 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 9.3e-10 68.6 340 29.1
CANSAT54G1826 Cannabis sativa HOM05D000179 ORTHO05D000107 1.2e-09 68.2 299 29.8
TPR.G972 Trifolium pratense HOM05D048407 ORTHO05D051446 1.6e-09 67.8 155 40.6
Hund20205 Selenicereus undatus HOM05D000179 ORTHO05D000107 2.1e-09 67.4 244 33.6
SGA_v2.0_scaffold97G29198 Striga asiatica HOM05D000179 ORTHO05D000107 2.1e-09 67.4 151 41.7
SGA_v2.0_scaffold75G24873 Striga asiatica HOM05D000179 ORTHO05D000107 2.7e-09 67.0 244 34.0
Sed0026812 Sechium edule HOM05D000179 ORTHO05D000107 3.5e-09 66.6 258 33.3
TWI75G1376 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 4.6e-09 66.2 294 31.0
arahy.Tifrunner.gnm1.ann1.16I18L Arachis hypogaea HOM05D000179 ORTHO05D000107 7.9e-09 65.5 192 36.5
DCAR_006055 Daucus carota HOM05D065036 ORTHO05D045072 3.9e-08 63.2 173 34.7
PGR142G0926 Punica granatum HOM05D000179 ORTHO05D000107 3.9e-08 63.2 307 28.7
VMungo1127G0358 Vigna mungo HOM05D000179 ORTHO05D000107 3.9e-08 63.2 279 29.4
THA.LOC104826975 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 5.1e-08 62.8 305 31.1
Nitab4.5_0000106g0080 Nicotiana tabacum HOM05D000179 ORTHO05D000107 6.7e-08 62.4 318 27.7
AT5G03150 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 8.7e-08 62.0 168 38.1
A10p32780 Brassica napus HOM05D000179 ORTHO05D000107 8.7e-08 62.0 167 37.1
PSO063G3826 Papaver somniferum HOM05D000179 ORTHO05D000107 8.7e-08 62.0 247 32.8
MSTRG.12321 Avicennia marina HOM05D000179 ORTHO05D000107 1.1e-07 61.6 275 28.0
AL6G12430 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 1.5e-07 61.2 176 36.9
CAN.G631.11 Capsicum annuum HOM05D000179 ORTHO05D000107 1.5e-07 61.2 313 29.4
PSO339G2599 Papaver somniferum HOM05D000179 ORTHO05D000107 1.9e-07 60.8 416 26.9
Nitab4.5_0010509g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 2.5e-07 60.5 277 31.8
Peaxi162Scf00845g00005 Petunia axillaris HOM05D000179 ORTHO05D000107 4.3e-07 59.7 280 28.9
arahy.Tifrunner.gnm1.ann1.12MNW0 Arachis hypogaea HOM05D000179 ORTHO05D000107 5.7e-07 59.3 307 30.0
arahy.Tifrunner.gnm1.ann1.JW7TU4 Arachis hypogaea HOM05D000179 ORTHO05D000107 5.7e-07 59.3 307 30.0
arahy.Tifrunner.gnm1.ann1.H5QJF0 Arachis hypogaea HOM05D000179 ORTHO05D000107 9.6e-07 58.5 195 33.3
A03p01040 Brassica napus HOM05D000179 ORTHO05D000107 1.6e-06 57.8 163 35.0
arahy.Tifrunner.gnm1.ann1.6Z1LR7 Arachis hypogaea HOM05D000179 ORTHO05D000107 2.1e-06 57.4 193 34.2
C09p73650 Brassica napus HOM05D000179 ORTHO05D000107 2.1e-06 57.4 163 35.6
TPR.G9290 Trifolium pratense HOM05D000179 ORTHO05D000107 2.1e-06 57.4 233 29.6
arahy.Tifrunner.gnm1.ann1.5RS65W Arachis hypogaea HOM05D000179 ORTHO05D000107 2.8e-06 57.0 190 32.1
BraA03t09485Z Brassica rapa HOM05D000179 ORTHO05D000107 2.8e-06 57.0 167 36.5
BraA10t45312Z Brassica rapa HOM05D000179 ORTHO05D000107 4.8e-06 56.2 271 29.2


User provided reference genes

Program Settings