Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007847 Daucus carota HOM05D002690 ORTHO05D005709 1.6e-149 532.7 268 100.0
DCAR_003862 Daucus carota HOM05D002690 ORTHO05D005709 2.1e-117 426.0 264 79.5
Lj2C328G3 Lonicera japonica HOM05D002690 ORTHO05D005709 9.2e-97 357.5 268 73.1
Dinv15926 Davidia involucrata HOM05D002690 ORTHO05D005709 2.7e-96 355.9 266 68.8
Oeu060303.1 Olea europaea HOM05D002690 ORTHO05D005709 1.7e-95 353.2 269 68.0
Migut.H01337 Erythranthe guttata HOM05D002690 ORTHO05D005709 2.5e-94 349.4 266 66.2
HanXRQChr15g0480931 Helianthus annuus HOM05D002690 ORTHO05D005709 2.1e-93 346.3 268 64.9
Oeu058474.2 Olea europaea HOM05D002690 ORTHO05D005709 2.8e-93 345.9 264 67.4
Actinidia31389 Actinidia chinensis HOM05D001466 ORTHO05D005709 3.6e-93 345.5 266 64.7
Lsat_1_v5_gn_7_29481 Lactuca sativa HOM05D002690 ORTHO05D005709 3.6e-93 345.5 275 67.3
Nitab4.5_0011416g0020 Nicotiana tabacum HOM05D002690 ORTHO05D005709 4.7e-93 345.1 271 65.7
Gorai.008G046800 Gossypium raimondii HOM05D002690 ORTHO05D005709 2.4e-92 342.8 273 68.5
Duzib132G0834 Durio zibethinus HOM05D002690 ORTHO05D005709 2.6e-91 339.3 268 66.8
Gohir.D12G044500 Gossypium hirsutum HOM05D002690 ORTHO05D005709 2.6e-91 339.3 271 68.3
Nitab4.5_0001181g0060 Nicotiana tabacum HOM05D002690 ORTHO05D005709 2.9e-90 335.9 268 64.9
Migut.M01886 Erythranthe guttata HOM05D002690 ORTHO05D005709 4.9e-90 335.1 267 64.4
SGA_v2.0_scaffold51G18649 Striga asiatica HOM05D002690 ORTHO05D005709 6.4e-90 334.7 268 66.4
Hund26562 Selenicereus undatus HOM05D002690 ORTHO05D005709 1.1e-89 334.0 264 65.5
vmacro03397 Vaccinium macrocarpon HOM05D002690 ORTHO05D005709 1.1e-89 334.0 266 63.9
TAR626G1080 Trochodendron aralioides HOM05D002690 ORTHO05D005709 2.4e-89 332.8 267 63.3
Solyc02g021760.3 Solanum lycopersicum HOM05D002690 ORTHO05D005709 5.4e-89 331.6 267 64.0
PGSC0003DMG400021104 Solanum tuberosum HOM05D002690 ORTHO05D005709 7.1e-89 331.3 268 66.8
TWI09G1166 Tripterygium wilfordii HOM05D002690 ORTHO05D005709 7.1e-89 331.3 266 62.8
ECA236G0560 Erigeron canadensis HOM05D002690 ORTHO05D005709 1.2e-88 330.5 272 65.8
Sopen02g006300 Solanum pennellii HOM05D002690 ORTHO05D005709 1.2e-88 330.5 267 64.0
Rhsim13G0120100 Rhododendron simsii HOM05D002690 ORTHO05D005709 2.1e-88 329.7 266 63.2
Sopen02g019330 Solanum pennellii HOM05D002690 ORTHO05D005709 4.6e-88 328.6 265 66.4
Manes.14G122500 Manihot esculenta HOM05D002690 ORTHO05D005709 6.0e-88 328.2 276 64.1
EL10Ac8g19577 Beta vulgaris HOM05D002690 ORTHO05D005709 7.8e-88 327.8 266 63.9
CSS0024768 Camellia sinensis var. sinensis HOM05D002690 ORTHO05D005709 3.0e-87 325.9 264 65.9
Gohir.A12G045500 Gossypium hirsutum HOM05D002690 ORTHO05D005709 6.6e-87 324.7 271 66.8
AUR62042032 Chenopodium quinoa HOM05D002690 ORTHO05D005709 1.1e-86 323.9 266 63.9
Glyma.15G128500 Glycine max HOM05D002690 ORTHO05D005709 1.1e-86 323.9 266 62.0
CiPaw.09G115900 Carya illinoinensis HOM05D002690 ORTHO05D005709 1.5e-86 323.6 269 64.3
Solyc02g070240.3 Solanum lycopersicum HOM05D002690 ORTHO05D005709 1.5e-86 323.6 266 66.9
Ah.14g086150 Amaranthus hybridus HOM05D002690 ORTHO05D005709 3.3e-86 322.4 267 64.4
CiPaw.10G086100 Carya illinoinensis HOM05D002690 ORTHO05D005709 7.3e-86 321.2 269 62.5
Atru.chr10.891 Acer truncatum HOM05D002690 ORTHO05D005709 1.6e-85 320.1 270 64.8
Cpa.g.sc17.104 Carica papaya HOM05D002690 ORTHO05D005709 3.6e-85 318.9 277 64.6
TAR627G0656 Trochodendron aralioides HOM05D002690 ORTHO05D005709 4.8e-85 318.5 267 64.4
Thecc.02G012500 Theobroma cacao HOM05D002690 ORTHO05D005709 1.1e-84 317.4 269 61.3
SalBow7G2713 Salvia bowleyana HOM05D002690 ORTHO05D005709 4.0e-84 315.5 264 65.2
Lj6g0003051 Lotus japonicus HOM05D002690 ORTHO05D005709 1.2e-83 313.9 270 63.0
MSTRG.16286 Avicennia marina HOM05D002690 ORTHO05D005709 2.0e-83 313.2 265 63.4
FAN16G3174 Fragaria x ananassa HOM05D002690 ORTHO05D005709 2.0e-83 313.2 269 61.7
Glyma.09G022200 Glycine max HOM05D002690 ORTHO05D005709 2.0e-83 313.2 268 60.8
Prupe.4G089500 Prunus persica HOM05D002690 ORTHO05D005709 2.0e-83 313.2 274 61.7
FAN11G1563 Fragaria x ananassa HOM05D002690 ORTHO05D005709 2.6e-83 312.8 268 60.4
FAN25G1940 Fragaria x ananassa HOM05D002690 ORTHO05D005709 2.6e-83 312.8 269 61.7
Cfa000832 Carpinus fangiana HOM05D002690 ORTHO05D005709 3.4e-83 312.4 270 63.3
ClCG08G001630 Citrullus lanatus HOM05D002690 ORTHO05D005709 3.4e-83 312.4 271 60.5
MELO3C022129.2 Cucumis melo HOM05D002690 ORTHO05D005709 3.4e-83 312.4 271 60.9
PSO541G0016 Papaver somniferum HOM05D002690 ORTHO05D005709 4.5e-83 312.0 268 59.0
Lalb_Chr15g0088721 Lupinus albus HOM05D002690 ORTHO05D005709 5.8e-83 311.6 273 59.7
Psat1g168520 Pisum sativum HOM05D002690 ORTHO05D005709 5.8e-83 311.6 271 60.9
CsaV3_5G039520 Cucumis sativus L. HOM05D002690 ORTHO05D005709 7.6e-83 311.2 271 60.5
FvH4_3g09980 Fragaria vesca HOM05D002690 ORTHO05D005709 7.6e-83 311.2 265 60.4
FAN21G3939 Fragaria x ananassa HOM05D002690 ORTHO05D005709 7.6e-83 311.2 266 61.7
MD05G1274200 Malus domestica HOM05D002690 ORTHO05D005709 7.6e-83 311.2 270 61.9
MD10G1253900 Malus domestica HOM05D002690 ORTHO05D005709 7.6e-83 311.2 270 61.9
VMungo0540G2147 Vigna mungo HOM05D002690 ORTHO05D005709 9.9e-83 310.8 266 61.7
PSO675G8993 Papaver somniferum HOM05D002690 ORTHO05D005709 1.3e-82 310.5 268 59.3
RcHm_v2.0_Chr5g0015861 Rosa chinensis HOM05D002690 ORTHO05D005709 1.7e-82 310.1 271 59.0
PGR031G1950 Punica granatum HOM05D002690 ORTHO05D005709 2.9e-82 309.3 274 60.2
COL.COLO4_17684 Corchorus olitorius HOM05D002690 ORTHO05D005709 3.8e-82 308.9 252 64.3
Nn3g20245 Nelumbo nucifera HOM05D002690 ORTHO05D005709 6.4e-82 308.1 268 62.3
Ciclev10014454m.g Citrus clementina HOM05D002690 ORTHO05D005709 1.1e-81 307.4 269 59.1
Sed0021012 Sechium edule HOM05D002690 ORTHO05D005709 2.4e-81 306.2 270 61.1
Eucgr.E02496 Eucalyptus grandis HOM05D002690 ORTHO05D005709 3.2e-81 305.8 294 58.8
ClCG03G006290 Citrullus lanatus HOM05D002690 ORTHO05D005709 4.2e-81 305.4 275 58.5
unitig_61.g26082 Utricularia gibba HOM05D002690 ORTHO05D005709 9.3e-81 304.3 266 60.2
Phvul.006G130200 Phaseolus vulgaris HOM05D002690 ORTHO05D005709 1.2e-80 303.9 266 63.9
Sed0027591 Sechium edule HOM05D002690 ORTHO05D005709 2.1e-80 303.1 268 59.7
Thhalv10007064m.g Eutrema salsugineum HOM05D002690 ORTHO05D005709 2.7e-80 302.8 264 65.9
Lalb_Chr18g0057871 Lupinus albus HOM05D002690 ORTHO05D005709 7.9e-80 301.2 275 60.4
TPR.G30088 Trifolium pratense HOM05D002690 ORTHO05D005709 1.8e-79 300.1 278 60.1
Aqoxy1G01608 Aquilegia oxysepala HOM05D002690 ORTHO05D005709 3.0e-79 299.3 265 59.2
Medtr2g029540 Medicago truncatula HOM05D002690 ORTHO05D005709 3.9e-79 298.9 273 58.6
QL05p053241 Quercus lobata HOM05D002690 ORTHO05D005709 5.1e-79 298.5 286 60.5
Sc24g0001450 Simmondsia chinensis HOM05D002690 ORTHO05D005709 5.1e-79 298.5 265 60.4
Haze_05773 Corylus avellana HOM05D002690 ORTHO05D005709 6.7e-79 298.1 326 53.4
MELO3C002805.2 Cucumis melo HOM05D002690 ORTHO05D005709 1.3e-77 293.9 271 57.9
CANSAT35G0839 Cannabis sativa HOM05D002690 ORTHO05D005709 2.8e-77 292.7 269 61.3
Potri.011G089901 Populus trichocarpa HOM05D002690 ORTHO05D005709 6.2e-77 291.6 277 58.5
AL1G44410 Arabidopsis lyrata HOM05D002690 ORTHO05D005709 1.8e-76 290.0 264 62.1
MBI18_g10583_MAGBIO Magnolia biondii HOM05D002690 ORTHO05D005709 2.4e-76 289.7 278 59.4
arahy.Tifrunner.gnm1.ann1.XVC3D4 Arachis hypogaea HOM05D002690 ORTHO05D005709 3.1e-76 289.3 270 58.1
Nitab4.5_0000607g0100 Nicotiana tabacum HOM05D002690 ORTHO05D005709 4.0e-76 288.9 202 69.8
Nitab4.5_0000100g0020 Nicotiana tabacum HOM05D002690 ORTHO05D005709 6.9e-76 288.1 202 68.8
Potri.001G357800 Populus trichocarpa HOM05D002690 ORTHO05D005709 6.9e-76 288.1 264 60.2
Sp1g26280 Schrenkiella parvula HOM05D002690 ORTHO05D005709 9.0e-76 287.7 264 64.0
Manes.06G055600 Manihot esculenta HOM05D002690 ORTHO05D005709 1.2e-75 287.3 224 65.2
Aa31LG10G6630 Aethionema arabicum HOM05D002690 ORTHO05D005709 4.5e-75 285.4 265 58.9
THA.LOC104798605 Tarenaya hassleriana HOM05D002690 ORTHO05D005709 4.5e-75 285.4 264 59.1
HPP92_016574 Vanilla planifolia HOM05D002690 ORTHO05D005709 7.6e-75 284.6 271 59.4
AT1G30460 Arabidopsis thaliana HOM05D002690 ORTHO05D005709 1.7e-74 283.5 265 61.5
arahy.Tifrunner.gnm1.ann1.9EB9RH Arachis hypogaea HOM05D002690 ORTHO05D005709 2.9e-74 282.7 270 57.4
ATR0165G057 Amborella trichopoda HOM05D002690 ORTHO05D005709 8.4e-74 281.2 267 55.1
C03p76770 Brassica napus HOM05D002690 ORTHO05D005709 1.9e-73 280.0 184 75.5
Lsat_1_v5_gn_4_29061 Lactuca sativa HOM05D002690 ORTHO05D005709 3.2e-73 279.3 226 63.3
A08p24440 Brassica napus HOM05D002690 ORTHO05D005709 4.2e-73 278.9 184 75.0
BraA08t34399Z Brassica rapa HOM05D002690 ORTHO05D005709 4.2e-73 278.9 184 75.0
Carub.0001s2865 Capsella rubella HOM05D002690 ORTHO05D005709 5.5e-73 278.5 264 64.0
BcaNung05261 Brassica carinata HOM05D002690 ORTHO05D005709 2.7e-72 276.2 185 74.6
CARHR029850 Cardamine hirsuta HOM05D002690 ORTHO05D005709 2.3e-71 273.1 264 61.0
CDE12G0823 Ceratophyllum demersum HOM05D002690 ORTHO05D005709 3.0e-71 272.7 272 57.0
Sabra16G0235600 Salix brachista HOM05D002690 ORTHO05D005709 5.1e-71 271.9 184 68.5
BcaC01g00193 Brassica carinata HOM05D002690 ORTHO05D005709 1.9e-70 270.0 221 65.2
CDE04G1060 Ceratophyllum demersum HOM05D002690 ORTHO05D005709 1.9e-70 270.0 274 57.3
BolC3t19931H Brassica oleracea HOM05D002690 ORTHO05D005709 5.6e-70 268.5 189 71.4
ECA234G2820 Erigeron canadensis HOM05D002690 ORTHO05D005709 5.6e-70 268.5 197 66.0
C07p15130 Brassica napus HOM05D002690 ORTHO05D005709 1.3e-69 267.3 184 72.3
A07p09930 Brassica napus HOM05D002690 ORTHO05D005709 2.8e-69 266.2 268 60.4
Actinidia32368 Actinidia chinensis HOM05D002690 ORTHO05D005709 5.8e-67 258.5 182 70.3
GSVIVG01021617001 Vitis vinifera HOM05D002690 ORTHO05D005709 6.5e-66 255.0 182 68.7
CAN.G660.45 Capsicum annuum HOM05D002690 ORTHO05D005709 4.2e-65 252.3 180 72.2
SEGI_22079 Sequoiadendron giganteum HOM05D002690 ORTHO05D005709 7.1e-65 251.5 277 50.2
Ca_00801_v3 Cicer arietinum L. HOM05D002690 ORTHO05D005709 1.2e-64 250.8 275 54.2
Peaxi162Scf00155g00068 Petunia axillaris HOM05D002690 ORTHO05D005709 1.8e-63 246.9 281 54.1
CsaV3_1G037380 Cucumis sativus L. HOM05D002690 ORTHO05D005709 6.5e-58 228.4 182 62.1
Pp3c20_9290 Physcomitrium patens HOM05D002690 ORTHO05D005709 1.9e-57 226.9 186 59.1
AagrBONN_evm.TU.Sc2ySwM_228.4357 Anthoceros agrestis HOM05D002690 ORTHO05D005709 5.5e-57 225.3 285 46.0
AagrBONN_evm.TU.Sc2ySwM_362.1691 Anthoceros agrestis HOM05D002690 ORTHO05D005709 5.1e-55 218.8 281 43.8
Mapoly0056s0030 Marchantia polymorpha HOM05D002690 ORTHO05D005709 6.3e-53 211.8 295 45.4
Sabra11G0073400 Salix brachista HOM05D002690 ORTHO05D005709 6.5e-50 201.8 148 64.2
Zm00001eb224690 Zea mays HOM05D002690 ORTHO05D005709 6.5e-50 201.8 268 48.1
Zm00001eb273850 Zea mays HOM05D002690 ORTHO05D005709 1.8e-47 193.7 268 44.4
HPP92_015677 Vanilla planifolia HOM05D002690 ORTHO05D005709 3.3e-46 189.5 169 55.6
RcHm_v2.0_Chr5g0015731 Rosa chinensis HOM05D002690 ORTHO05D005709 3.0e-39 166.4 137 61.3
Os06g0677700 Oryza sativa ssp. japonica HOM05D002690 ORTHO05D005709 5.7e-38 162.2 274 41.6
unitig_0.g927 Utricularia gibba HOM05D002690 ORTHO05D005709 1.7e-37 160.6 265 41.5
Cre24.g755647 Chlamydomonas reinhardtii HOM05D002690 ORTHO05D005709 1.0e-34 151.4 135 52.6
BolC7t42017H Brassica oleracea HOM05D002690 ORTHO05D005709 2.9e-34 149.8 270 44.4
PRCOL_00005787 Prasinoderma coloniale HOM05D002690 ORTHO05D005709 8.5e-34 148.3 97 60.8
MCO01G443 Micromonas commoda HOM05D002690 ORTHO05D005709 1.2e-32 144.4 138 50.7
AUR62042460 Chenopodium quinoa HOM05D002690 ORTHO05D005709 2.6e-30 136.7 138 55.1
Aqoxy1G01609 Aquilegia oxysepala HOM05D002690 ORTHO05D005709 1.0e-23 114.8 126 48.4
SEGI_04190 Sequoiadendron giganteum HOM05D002690 ORTHO05D005709 1.4e-20 104.4 122 49.2
RcHm_v2.0_Chr5g0015771 Rosa chinensis HOM05D004072 ORTHO05D005933 6.1e-16 89.0 79 57.0
PRCOL_00006800 Prasinoderma coloniale HOM05D002690 ORTHO05D005709 9.2e-12 75.1 55 50.9
Sabra11G0078900 Salix brachista HOM05D002690 ORTHO05D005709 2.1e-08 63.9 83 43.4


User provided reference genes

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