Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005181 Daucus carota HOM05D000133 ORTHO05D175968 1.2e-36 156.0 78 100.0
DCAR_015093 Daucus carota HOM05D000133 ORTHO05D178135 1.3e-35 152.5 76 100.0
DCAR_031872 Daucus carota HOM05D001289 ORTHO05D002298 3.4e-31 137.9 70 98.6
DCAR_001475 Daucus carota HOM05D000133 ORTHO05D000259 1.4e-08 62.8 33 87.9
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 1.4e-08 62.8 33 87.9
PSO764G0106 Papaver somniferum HOM05D000133 ORTHO05D000259 1.4e-08 62.8 33 87.9
PSO832G2244 Papaver somniferum HOM05D000133 ORTHO05D000259 1.4e-08 62.8 33 87.9
AUR62004407 Chenopodium quinoa HOM05D000133 ORTHO05D000259 4.0e-08 61.2 34 82.4
AUR62022613 Chenopodium quinoa HOM05D000133 ORTHO05D000259 4.0e-08 61.2 34 82.4
SGA_v2.0_scaffold118G32648 Striga asiatica HOM05D000133 ORTHO05D000259 5.2e-08 60.8 33 84.8
GSVIVG01037111001 Vitis vinifera HOM05D000133 ORTHO05D000259 5.2e-08 60.8 33 84.8
Os11g0242800 Oryza sativa ssp. japonica HOM05D000133 ORTHO05D000259 6.8e-08 60.5 33 84.8
Sc01g0000020 Simmondsia chinensis HOM05D000133 ORTHO05D000259 6.8e-08 60.5 37 78.4
unitig_578.g16110 Utricularia gibba HOM05D000133 ORTHO05D000259 6.8e-08 60.5 33 84.8
Actinidia23036 Actinidia chinensis HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Ah.05g180190 Amaranthus hybridus HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 81.8
arahy.Tifrunner.gnm1.ann1.8LQR2U Arachis hypogaea HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
arahy.Tifrunner.gnm1.ann1.J9AJ01 Arachis hypogaea HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
CAN.G14.38 Capsicum annuum HOM05D000133 ORTHO05D000259 8.9e-08 60.1 34 79.4
Cpa.g.sc21.239 Carica papaya HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
COL.COLO4_25107 Corchorus olitorius HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Dinv37396 Davidia involucrata HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Duzib053G0004 Durio zibethinus HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Migut.C01408 Erythranthe guttata HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 81.8
FvH4_3g17050 Fragaria vesca HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
FAN11G3947 Fragaria x ananassa HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
FAN16G0508 Fragaria x ananassa HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
FAN21G0971 Fragaria x ananassa HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
FAN25G3486 Fragaria x ananassa HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Glyma.10G177200 Glycine max HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Glyma.20G212900 Glycine max HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Gohir.A05G248600 Gossypium hirsutum HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Gohir.D05G250600 Gossypium hirsutum HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Gorai.009G262000 Gossypium raimondii HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Oeu019663.1 Olea europaea HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Oeu051766.2 Olea europaea HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Prupe.8G001200 Prunus persica HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
Sed0007613 Sechium edule HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 81.8
Thecc.08G167600 Theobroma cacao HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
TPR.G20126 Trifolium pratense HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 81.8
TWI18G1118 Tripterygium wilfordii HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
TWI75G1351 Tripterygium wilfordii HOM05D000133 ORTHO05D000259 8.9e-08 60.1 33 84.8
RcHm_v2.0_Chr5g0028381 Rosa chinensis HOM05D000133 ORTHO05D000259 1.2e-07 59.7 57 56.1
Zm00001eb112260 Zea mays HOM05D000133 ORTHO05D000259 1.2e-07 59.7 33 81.8
Zm00001eb168100 Zea mays HOM05D000133 ORTHO05D000259 1.2e-07 59.7 33 81.8
EL10Ac1g00361 Beta vulgaris HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
CiPaw.04G007200 Carya illinoinensis HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
Dinv22069 Davidia involucrata HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
Eucgr.F04099 Eucalyptus grandis HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
Hma1.2p1_0378F.1_g139700 Hydrangea macrophylla HOM05D000133 ORTHO05D000259 1.5e-07 59.3 57 54.4
Nitab4.5_0003757g0140 Nicotiana tabacum HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
PGR042G0309 Punica granatum HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
Solyc06g063370.3 Solanum lycopersicum HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
Sopen06g022840 Solanum pennellii HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
PGSC0003DMG400026500 Solanum tuberosum HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
THA.LOC104815606 Tarenaya hassleriana HOM05D000133 ORTHO05D000259 1.5e-07 59.3 33 81.8
TAR376G0151 Trochodendron aralioides HOM05D000133 ORTHO05D000259 1.5e-07 59.3 57 54.4
ATR1089G003 Amborella trichopoda HOM05D000133 ORTHO05D000259 2.0e-07 58.9 33 81.8
Cfa008024 Carpinus fangiana HOM05D000133 ORTHO05D000259 2.0e-07 58.9 33 78.8
CiPaw.03G010400 Carya illinoinensis HOM05D000133 ORTHO05D000259 2.0e-07 58.9 33 78.8
Aqoxy5G00148 Aquilegia oxysepala HOM05D000133 ORTHO05D000259 2.6e-07 58.5 57 52.6
CANSAT56G0283 Cannabis sativa HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
Ca_02135_v3 Cicer arietinum L. HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
ClCG08G001920 Citrullus lanatus HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
MELO3C022113.2 Cucumis melo HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
CsaV3_5G039350 Cucumis sativus L. HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
Gohir.A10G069300 Gossypium hirsutum HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
Lj2g0015067 Lotus japonicus HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
MD00G1103100 Malus domestica HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
MD00G1161400 Malus domestica HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
MD05G1000500 Malus domestica HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
Manes.15G183900 Manihot esculenta HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
Manes.15G183933 Manihot esculenta HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
Phvul.007G113000 Phaseolus vulgaris HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
Psat1g111960 Pisum sativum HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 78.8
SalBow7G1068 Salvia bowleyana HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
THA.LOC104806475 Tarenaya hassleriana HOM05D000133 ORTHO05D000259 2.6e-07 58.5 33 81.8
CDE04G2582 Ceratophyllum demersum HOM05D000133 ORTHO05D000259 3.4e-07 58.2 33 81.8
Peaxi162Scf00402g00937 Petunia axillaris HOM05D000133 ORTHO05D000259 3.4e-07 58.2 33 78.8
Rhsim12G0000600 Rhododendron simsii HOM05D000133 ORTHO05D000259 3.4e-07 58.2 32 84.4
Hund27246 Selenicereus undatus HOM05D000133 ORTHO05D000259 3.4e-07 58.2 33 78.8
Sc01g0005520 Simmondsia chinensis HOM05D000133 ORTHO05D000259 3.4e-07 58.2 33 81.8
unitig_32.g11222 Utricularia gibba HOM05D000133 ORTHO05D000259 3.4e-07 58.2 33 78.8
Atru.chr13.2627 Acer truncatum HOM05D000133 ORTHO05D000259 4.4e-07 57.8 33 78.8
Ciclev10021452m.g Citrus clementina HOM05D000133 ORTHO05D000259 4.4e-07 57.8 33 81.8
Lsat_1_v5_gn_9_69440 Lactuca sativa HOM05D000133 ORTHO05D000259 4.4e-07 57.8 33 81.8
Lalb_Chr03g0033211 Lupinus albus HOM05D000133 ORTHO05D000259 4.4e-07 57.8 33 78.8
QL09p000845 Quercus lobata HOM05D000133 ORTHO05D000259 4.4e-07 57.8 33 78.8
TAR628G0244 Trochodendron aralioides HOM05D000133 ORTHO05D000259 4.4e-07 57.8 33 78.8
CDE07G0169 Ceratophyllum demersum HOM05D000133 ORTHO05D000259 5.8e-07 57.4 33 78.8
Glyma.09G154700 Glycine max HOM05D000133 ORTHO05D000259 5.8e-07 57.4 33 78.8
Glyma.16G205200 Glycine max HOM05D000133 ORTHO05D000259 5.8e-07 57.4 33 78.8
Phvul.004G128200 Phaseolus vulgaris HOM05D000133 ORTHO05D000259 5.8e-07 57.4 33 78.8
VMungo0464G1520 Vigna mungo HOM05D000133 ORTHO05D000259 5.8e-07 57.4 33 78.8
Aa31LG9G11670 Aethionema arabicum HOM05D000133 ORTHO05D000259 7.5e-07 57.0 33 78.8
BcaB01g01472 Brassica carinata HOM05D000133 ORTHO05D000259 7.5e-07 57.0 33 78.8
CARHR256300 Cardamine hirsuta HOM05D000133 ORTHO05D000259 7.5e-07 57.0 33 78.8
Lsat_1_v5_gn_4_131820 Lactuca sativa HOM05D000133 ORTHO05D000259 7.5e-07 57.0 33 78.8
Lalb_Chr01g0008761 Lupinus albus HOM05D000133 ORTHO05D000259 7.5e-07 57.0 33 75.8
Medtr6g060175 Medicago truncatula HOM05D000133 ORTHO05D000259 7.5e-07 57.0 33 75.8
vmacro00909 Vaccinium macrocarpon HOM05D000133 ORTHO05D000259 7.5e-07 57.0 31 83.9
MSTRG.25510 Avicennia marina HOM05D000133 ORTHO05D000259 9.8e-07 56.6 33 78.8
HanXRQChr11g0326521 Helianthus annuus HOM05D000133 ORTHO05D000259 9.8e-07 56.6 33 78.8
HPP92_002649 Vanilla planifolia HOM05D000133 ORTHO05D000259 9.8e-07 56.6 33 75.8
Cc10_g16210 Coffea canephora HOM05D000133 ORTHO05D000259 1.3e-06 56.2 57 52.6
unitig_748.g7726 Utricularia gibba HOM05D000133 ORTHO05D000259 1.3e-06 56.2 33 75.8
ECA232G0737 Erigeron canadensis HOM05D000133 ORTHO05D000259 1.7e-06 55.8 33 75.8
ECA232G4998 Erigeron canadensis HOM05D000133 ORTHO05D000259 1.7e-06 55.8 33 75.8
Gohir.D10G082100 Gossypium hirsutum HOM05D000133 ORTHO05D000259 1.7e-06 55.8 33 78.8
SEGI_11701 Sequoiadendron giganteum HOM05D000133 ORTHO05D000259 1.7e-06 55.8 32 81.2
AL6G44210 Arabidopsis lyrata HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
AT4G10340 Arabidopsis thaliana HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BcaB05g23908 Brassica carinata HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BcaC01g04680 Brassica carinata HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BcaC03g16402 Brassica carinata HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BcaC04g21030 Brassica carinata HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
A03p28950 Brassica napus HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
A09p28740 Brassica napus HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
C02p42340 Brassica napus HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
C03p34990 Brassica napus HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
C09p36480 Brassica napus HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BolC2t10276H Brassica oleracea HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BolC3t15811H Brassica oleracea HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BolC9t56483H Brassica oleracea HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BraA03t12093Z Brassica rapa HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
BraA09t38434Z Brassica rapa HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
Carub.0006s2894 Capsella rubella HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
Thhalv10028871m.g Eutrema salsugineum HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
Sp6g07090 Schrenkiella parvula HOM05D000133 ORTHO05D000259 2.2e-06 55.5 33 75.8
ECA232G0793 Erigeron canadensis HOM05D000133 ORTHO05D000259 2.9e-06 55.1 33 75.8
ECA232G1943 Erigeron canadensis HOM05D000133 ORTHO05D000259 2.9e-06 55.1 33 75.8
ECA232G4819 Erigeron canadensis HOM05D000133 ORTHO05D000259 2.9e-06 55.1 33 75.8
Potri.019G063101 Populus trichocarpa HOM05D000133 ORTHO05D000259 2.9e-06 55.1 31 80.6
Sabra19G0076400 Salix brachista HOM05D000133 ORTHO05D000259 4.9e-06 54.3 31 80.6
Sabra19G0080400 Salix brachista HOM05D000133 ORTHO05D000259 4.9e-06 54.3 31 80.6


User provided reference genes

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