Gene: Sopen06g022840

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g022840
  • Transcript Identifier Sopen06g022840.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 50331850-50333505 : negative

Gene Family Information

  • ID HOM05D000133
  • #Genes/#Species 2666/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g022840.1

Descriptions

  • Description photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus | light harvesting complex of photosystem II 5 (LHCB5) | FUNCTIONS IN: chlorophyll binding | INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis, nonphotochemical quenching | LOCATED IN: in 9 components | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein | BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT4G10340
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT4G10340
GO:0009765
IEA
InterProphotosynthesis, light harvesting
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT4G10340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G10340
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G10340
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G10340

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT4G10340
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT4G10340
GO:0009517
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II AT4G10340
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G10340
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT4G10340
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT4G10340
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid AT4G10340
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G10340
GO:0009783
ISO
PLAZA Integrative Orthologyphotosystem II antenna complex AT4G10340
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022796 Chlorophyll A-B binding protein
IPR023329 Chlorophyll a/b binding domain superfamily
IPR001344 Chlorophyll A-B binding protein, plant and chromista
Mapman id Description
1.1.1.1.3 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb5