Gene: PGSC0003DMG400026500

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400026500
  • Transcript Identifier PGSC0003DMT400068129
  • Gene Type Coding gene
  • Location ST4.03ch06 : 48020368-48022023 : positive

Gene Family Information

  • ID HOM05D000133
  • #Genes/#Species 2666/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37451382
  • id PGSC0003DMG400026500.v4.03
  • uniprot M1CIH8

Descriptions

  • Description Type I (26 kD) CP29 polypeptide
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT4G10340
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT4G10340
GO:0009768
IBA
GOA Databasephotosynthesis, light harvesting in photosystem I
GO:0009416
IBA
GOA Databaseresponse to light stimulus
GO:0009765
IEA
GOA Databasephotosynthesis, light harvesting
GO:0009765
IEA
InterProphotosynthesis, light harvesting
GO:0018298
IEA
GOA Databaseprotein-chromophore linkage
GO:0015979
IEA
GOA Databasephotosynthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G10340
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G10340
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G10340
GO:0016168
IEA
GOA Databasechlorophyll binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010287
IBA
GOA Databaseplastoglobule
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT4G10340
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid AT4G10340
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G10340
GO:0009783
ISO
PLAZA Integrative Orthologyphotosystem II antenna complex AT4G10340
GO:0009517
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II AT4G10340
GO:0009535
IBA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009579
IEA
GOA Databasethylakoid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0009522
IEA
GOA Databasephotosystem I
GO:0009523
IEA
GOA Databasephotosystem II
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022796 Chlorophyll A-B binding protein
IPR023329 Chlorophyll a/b binding domain superfamily
IPR001344 Chlorophyll A-B binding protein, plant and chromista
Mapman id Description
1.1.1.1.3 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb5