Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 4.8e-169 597.8 318 100.0
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 1.0e-118 430.6 318 71.4
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 3.4e-114 415.6 319 71.2
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 3.4e-114 415.6 327 74.0
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 5.8e-114 414.8 318 72.3
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 2.9e-113 412.5 322 72.4
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 6.4e-113 411.4 320 67.8
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 6.4e-113 411.4 319 71.5
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 1.4e-112 410.2 322 71.7
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 4.1e-112 408.7 319 70.8
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 5.4e-112 408.3 263 81.7
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 7.1e-112 407.9 315 72.7
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 7.1e-112 407.9 319 71.5
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 9.2e-112 407.5 319 72.1
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 4.6e-111 405.2 265 77.7
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 4.6e-111 405.2 322 71.1
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 7.8e-111 404.4 318 70.4
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 1.3e-110 403.7 318 70.1
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 1.3e-110 403.7 319 66.5
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 3.0e-110 402.5 319 72.7
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 8.7e-110 401.0 303 73.6
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.1e-109 400.6 327 70.6
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 1.1e-109 400.6 320 71.9
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 1.5e-109 400.2 319 69.3
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.5e-109 400.2 301 74.4
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.5e-109 400.2 335 67.2
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 4.3e-109 398.7 319 69.9
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 7.3e-109 397.9 271 77.1
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 7.3e-109 397.9 265 80.8
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 1.2e-108 397.1 270 77.4
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 8.1e-108 394.4 303 72.6
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 1.1e-107 394.0 322 69.9
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.8e-107 393.3 318 69.5
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 2.4e-107 392.9 319 68.3
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 5.2e-107 391.7 319 69.0
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 1.5e-106 390.2 317 71.0
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 3.4e-106 389.0 318 69.8
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 4.4e-106 388.7 302 67.9
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 9.9e-106 387.5 323 67.8
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 1.3e-105 387.1 314 67.8
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.7e-105 386.7 265 78.1
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 2.9e-105 386.0 273 74.4
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 4.9e-105 385.2 326 69.0
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 6.4e-105 384.8 318 69.8
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 6.4e-105 384.8 323 67.8
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 8.4e-105 384.4 283 72.8
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 8.4e-105 384.4 272 76.1
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.1e-104 384.0 249 82.7
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.4e-104 383.6 331 68.3
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 1.9e-104 383.3 276 69.6
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 2.4e-104 382.9 272 71.7
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 2.4e-104 382.9 274 75.2
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 3.2e-104 382.5 249 81.9
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 3.2e-104 382.5 325 62.8
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 5.4e-104 381.7 280 72.9
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 9.3e-104 380.9 323 64.4
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 2.1e-103 379.8 271 74.2
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 3.5e-103 379.0 322 65.2
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 4.6e-103 378.6 312 66.0
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 7.8e-103 377.9 319 68.0
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 5.1e-102 375.2 319 63.3
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 4.3e-101 372.1 322 68.6
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 5.6e-101 371.7 319 67.4
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 5.6e-101 371.7 308 66.9
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 9.6e-101 370.9 270 73.0
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 9.6e-101 370.9 319 67.7
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 3.6e-100 369.0 318 64.8
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 4.8e-100 368.6 271 72.7
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 8.1e-100 367.9 274 72.3
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 4.0e-99 365.5 317 65.3
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 6.9e-99 364.8 303 66.7
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 2.6e-98 362.8 278 70.1
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.3e-97 360.5 318 63.2
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 2.2e-97 359.8 318 62.9
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.2e-97 359.8 247 73.3
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 2.9e-97 359.4 301 65.4
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 6.4e-97 358.2 225 81.3
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 1.9e-96 356.7 322 64.9
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 4.2e-96 355.5 314 67.2
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 5.4e-96 355.1 274 69.3
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 7.1e-96 354.8 262 72.9
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 9.3e-96 354.4 269 71.0
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 2.7e-95 352.8 290 67.6
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 2.7e-95 352.8 419 50.6
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 7.9e-95 351.3 290 67.2
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 1.3e-94 350.5 272 68.4
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 4.8e-92 342.0 226 78.3
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 4.0e-91 339.0 281 65.5
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 5.8e-90 335.1 270 63.0
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 1.7e-89 333.6 271 68.6
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 6.4e-89 331.6 269 66.9
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 8.4e-89 331.3 228 72.4
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.6e-87 327.0 318 59.1
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 3.5e-87 325.9 225 72.9
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 3.5e-87 325.9 225 72.9
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 1.0e-86 324.3 228 75.4
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 1.4e-83 313.9 249 64.3
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.8e-83 313.5 239 74.5
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 2.4e-83 313.2 185 83.2
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 4.5e-82 308.9 318 58.2
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 2.7e-79 299.7 272 64.0
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 3.4e-74 282.7 332 52.1
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 7.7e-74 281.6 189 80.4
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.0e-73 281.2 293 57.3
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 3.0e-70 269.6 259 57.5
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 1.8e-67 260.4 179 78.2
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 4.2e-64 249.2 260 56.5
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 1.4e-62 244.2 177 75.1
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 2.8e-60 236.5 253 51.0
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 3.6e-55 219.5 251 48.6
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 8.0e-55 218.4 313 47.0
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 7.4e-53 211.8 186 61.3
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 4.0e-46 189.5 151 70.2
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 2.2e-41 173.7 173 49.1
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 6.5e-41 172.2 128 65.6
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 5.7e-37 159.1 125 63.2
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.9e-32 144.1 197 50.3
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 5.5e-32 142.5 114 74.6
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 4.4e-29 132.9 98 67.3
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 9.8e-29 131.7 120 60.8
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 4.5e-26 122.9 217 38.7
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.6e-21 107.1 78 69.2
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 2.4e-19 100.5 101 56.4
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 7.8e-18 95.5 77 58.4
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 8.9e-14 82.0 70 64.3
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 2.1e-10 70.9 107 44.9
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-08 65.1 65 60.0
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 2.5e-08 63.9 65 61.5
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 2.5e-08 63.9 35 71.4
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 4.7e-07 59.7 64 56.2


User provided reference genes

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