Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 3.1e-163 578.6 321 100.0
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 2.7e-127 459.1 321 81.3
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 3.0e-126 455.7 324 80.2
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.5e-125 453.4 320 80.3
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.9e-125 453.0 321 81.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 7.4e-125 451.1 321 80.7
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 6.9e-123 444.5 322 79.5
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 2.0e-122 443.0 331 76.4
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 3.4e-122 442.2 322 78.6
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 3.4e-122 442.2 322 78.3
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 5.8e-122 441.4 329 78.4
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.7e-121 439.9 325 76.3
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.7e-121 439.9 324 77.8
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 3.8e-121 438.7 323 80.2
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 6.4e-121 438.0 327 76.8
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 1.9e-120 436.4 323 79.3
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 1.9e-120 436.4 321 78.8
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 2.5e-120 436.0 324 75.9
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 4.2e-120 435.3 323 76.8
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 5.5e-120 434.9 322 79.8
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.6e-119 433.3 329 77.5
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.5e-119 432.2 324 75.9
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 6.0e-119 431.4 326 75.8
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.0e-118 430.6 332 75.6
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 1.3e-118 430.3 337 74.2
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.8e-118 429.9 322 77.3
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 3.9e-118 428.7 322 77.6
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 1.5e-117 426.8 324 76.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.9e-117 426.4 322 77.3
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 2.5e-117 426.0 323 76.2
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 4.3e-117 425.2 319 77.4
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 4.3e-117 425.2 324 75.3
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 7.4e-117 424.5 322 75.8
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 9.6e-117 424.1 323 77.7
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 9.6e-117 424.1 322 77.0
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 9.6e-117 424.1 322 77.6
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 1.6e-116 423.3 324 76.5
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 3.7e-116 422.2 322 76.7
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 4.8e-116 421.8 324 74.7
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 1.1e-115 420.6 322 76.1
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.4e-115 420.2 330 75.2
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.4e-115 420.2 322 75.2
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.0e-115 418.7 322 75.2
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 9.0e-115 417.5 322 75.5
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.2e-114 417.2 330 74.8
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 1.2e-114 417.2 283 84.5
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 1.5e-114 416.8 321 74.8
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 1.5e-114 416.8 321 75.4
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 2.0e-114 416.4 323 74.6
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 2.0e-114 416.4 322 76.7
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 2.6e-114 416.0 321 75.7
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 2.6e-114 416.0 323 75.9
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.7e-113 413.3 321 77.3
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 2.9e-113 412.5 323 75.9
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 6.5e-113 411.4 323 74.0
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 6.5e-113 411.4 321 75.7
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 6.5e-113 411.4 324 74.7
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 8.4e-113 411.0 322 75.8
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.1e-112 410.6 327 73.4
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.4e-112 410.2 327 74.6
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.4e-112 410.2 324 75.3
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.9e-112 409.8 315 76.2
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.5e-112 409.5 306 71.9
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 3.2e-112 409.1 321 75.4
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 3.2e-112 409.1 321 75.4
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 5.5e-112 408.3 321 73.2
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 7.1e-112 407.9 324 75.0
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 9.3e-112 407.5 320 74.1
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.2e-111 407.1 322 73.6
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 1.6e-111 406.8 321 75.4
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 2.1e-111 406.4 326 75.2
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 2.1e-111 406.4 323 75.2
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 2.7e-111 406.0 320 75.6
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 2.7e-111 406.0 320 75.6
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.5e-111 405.6 327 74.6
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 3.5e-111 405.6 322 74.5
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 4.6e-111 405.2 325 74.5
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 4.6e-111 405.2 299 79.6
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 6.0e-111 404.8 326 73.0
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 7.9e-111 404.4 323 74.0
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 5.1e-110 401.7 322 75.8
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 6.7e-110 401.4 319 75.5
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 8.7e-110 401.0 321 74.5
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 8.7e-110 401.0 354 68.1
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 1.1e-109 400.6 327 74.6
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 1.1e-109 400.6 322 73.9
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.1e-109 400.6 327 74.0
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.3e-109 399.1 321 74.1
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 4.3e-109 398.7 331 72.2
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 5.7e-109 398.3 322 72.4
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 5.7e-109 398.3 321 72.3
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 7.4e-109 397.9 323 73.4
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 7.4e-109 397.9 321 73.8
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 9.7e-109 397.5 331 72.8
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 9.7e-109 397.5 321 73.8
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 9.7e-109 397.5 321 73.8
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 2.2e-108 396.4 321 73.5
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 2.2e-108 396.4 335 71.3
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 2.8e-108 396.0 299 79.3
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 3.7e-108 395.6 323 73.4
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 3.7e-108 395.6 323 73.1
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 3.7e-108 395.6 323 73.1
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 3.7e-108 395.6 323 73.4
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.7e-108 395.6 325 73.8
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 4.8e-108 395.2 258 89.5
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 4.8e-108 395.2 325 72.3
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 4.8e-108 395.2 322 71.4
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 6.3e-108 394.8 328 73.5
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 8.2e-108 394.4 378 65.9
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.8e-107 393.3 325 72.3
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.4e-107 392.9 326 70.6
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 3.1e-107 392.5 325 72.3
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 4.1e-107 392.1 326 73.0
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.3e-107 391.7 326 73.0
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.3e-107 391.7 328 72.6
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 9.0e-107 391.0 322 71.4
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.5e-106 390.2 324 73.1
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 2.0e-106 389.8 323 72.8
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 2.0e-106 389.8 272 82.0
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.5e-106 388.7 327 72.8
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 5.9e-106 388.3 307 74.9
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.2e-105 386.3 317 72.6
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.2e-105 386.3 308 73.1
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 2.9e-105 386.0 324 71.9
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 3.8e-105 385.6 322 72.4
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 3.8e-105 385.6 324 71.6
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.1e-104 384.0 256 86.3
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 4.2e-104 382.1 317 72.6
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.5e-104 381.7 256 77.3
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 9.4e-104 380.9 321 70.7
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 4.6e-103 378.6 324 71.0
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.0e-102 377.5 269 77.7
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 3.9e-102 375.6 321 71.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 3.9e-102 375.6 327 71.3
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 3.3e-101 372.5 326 71.8
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 4.8e-100 368.6 300 74.7
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.1e-99 365.9 300 73.0
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 4.5e-98 362.1 330 66.4
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.2e-97 359.8 322 61.8
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 5.5e-96 355.1 317 67.2
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 7.9e-95 351.3 227 90.3
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.0e-94 349.4 228 87.7
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 5.7e-93 345.1 355 62.8
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.8e-91 340.1 261 74.7
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.0e-90 336.7 228 84.2
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 7.7e-90 334.7 304 69.4
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 1.2e-87 327.4 300 64.3
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 3.9e-86 322.4 331 64.7
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 2.2e-84 316.6 267 65.2
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.2e-81 306.6 321 61.4
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.2e-81 306.6 321 61.4
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.9e-80 303.5 252 61.9
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.9e-80 303.5 257 74.7
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 4.2e-80 302.4 311 58.5
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 6.1e-79 298.5 246 78.0
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 4.0e-78 295.8 286 59.8
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 5.7e-77 292.0 250 58.8
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.3e-73 280.8 236 76.3
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 3.0e-70 269.6 193 83.4
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 6.8e-70 268.5 257 68.5
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 3.7e-60 236.1 284 45.8
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 7.3e-56 221.9 281 48.4
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.1e-54 216.5 146 71.9
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.6e-50 204.1 191 72.3
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.6e-50 202.6 122 78.7
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 4.3e-48 196.1 146 67.8
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.1e-47 193.7 122 76.2
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.1e-42 177.2 164 72.6
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.0e-38 162.9 142 64.8
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.6e-34 151.0 100 79.0
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 5.6e-32 142.5 96 76.0
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.4e-30 137.9 259 38.2
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 1.8e-30 137.5 108 75.9
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 1.8e-30 137.5 88 78.4
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.1e-24 118.2 90 68.9
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-19 101.7 141 56.0
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 7.8e-18 95.5 107 68.2
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 6.6e-17 92.4 83 80.7
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 2.1e-15 87.4 132 46.2
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 6.9e-14 82.4 148 54.7
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 5.1e-09 66.2 90 43.3
CAN.G835.4 Capsicum annuum HOM05D000091 ORTHO05D003679 4.8e-07 59.7 36 86.1


User provided reference genes

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